RNA–Protein interactions for RNA: ENST00000269844.4

PRDM15-201, Transcript of PR/SET domain 15, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM15, Length 4,881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM15-201ENST00000269844 E9PSI1 815 aa17.8■□□□□ 0.44
PRDM15-201ENST00000269844 ST18O60284 1047 aa17.8■□□□□ 0.44
PRDM15-201ENST00000269844 GNL2Q13823 731 aaKnown RBP17.8■□□□□ 0.44
PRDM15-201ENST00000269844 CHMP4AQ9BY43 222 aa17.8■□□□□ 0.44
PRDM15-201ENST00000269844 RNF214Q8ND24 703 aa17.8■□□□□ 0.44
PRDM15-201ENST00000269844 KCNJ4P48050 445 aa17.8■□□□□ 0.44
PRDM15-201ENST00000269844 RGL3Q3MIN7 710 aa17.79■□□□□ 0.44
PRDM15-201ENST00000269844 ITPRIPQ8IWB1 547 aa17.79■□□□□ 0.44
PRDM15-201ENST00000269844 CCAR2Q8N163 923 aaKnown RBP17.79■□□□□ 0.44
PRDM15-201ENST00000269844 ERICH4A6NGS2 130 aa17.78■□□□□ 0.44
PRDM15-201ENST00000269844 PATL2C9JE40 543 aaKnown RBP17.78■□□□□ 0.44
PRDM15-201ENST00000269844 IFT57Q9NWB7 429 aa17.78■□□□□ 0.44
PRDM15-201ENST00000269844 NAP1L2Q9ULW6 460 aaPredicted RBP17.78■□□□□ 0.44
PRDM15-201ENST00000269844 MCTP1Q6DN14 999 aa17.78■□□□□ 0.44
PRDM15-201ENST00000269844 FGD1P98174 961 aa17.78■□□□□ 0.44
PRDM15-201ENST00000269844 CLUAP1Q96AJ1 413 aa17.78■□□□□ 0.44
PRDM15-201ENST00000269844 ARGLU1Q9NWB6 273 aaPredicted RBP17.78■□□□□ 0.44
PRDM15-201ENST00000269844 NLRP13Q86W25 1043 aa17.77■□□□□ 0.44
PRDM15-201ENST00000269844 PDCL2Q8N4E4 241 aa17.77■□□□□ 0.44
PRDM15-201ENST00000269844 FOXD4L6Q3SYB3 417 aaPredicted RBP17.77■□□□□ 0.44
PRDM15-201ENST00000269844 FOXD4L3Q6VB84 417 aaPredicted RBP17.77■□□□□ 0.44
PRDM15-201ENST00000269844 NPHP1O15259 732 aa17.77■□□□□ 0.43
PRDM15-201ENST00000269844 TSPYL1Q9H0U9 437 aa17.77■□□□□ 0.43
PRDM15-201ENST00000269844 MCM4P33991 863 aa17.76■□□□□ 0.43
PRDM15-201ENST00000269844 NOL8Q76FK4 1167 aaKnown RBP17.76■□□□□ 0.43
PRDM15-201ENST00000269844 IRX3P78415 501 aaPredicted RBP17.76■□□□□ 0.43
PRDM15-201ENST00000269844 KANK4Q5T7N3 995 aaPredicted RBP17.75■□□□□ 0.43
PRDM15-201ENST00000269844 PAXIP1Q6ZW49 1069 aaPredicted RBP17.75■□□□□ 0.43
PRDM15-201ENST00000269844 CAVIN1Q6NZI2 390 aaKnown RBP17.75■□□□□ 0.43
PRDM15-201ENST00000269844 KIF3AQ9Y496 699 aa17.75■□□□□ 0.43
PRDM15-201ENST00000269844 TPM4P67936 248 aa17.74■□□□□ 0.43
PRDM15-201ENST00000269844 WRNQ14191 1432 aaPredicted RBP eCLIP17.74■□□□□ 0.43
PRDM15-201ENST00000269844 WASHC2AQ641Q2 1341 aa17.74■□□□□ 0.43
PRDM15-201ENST00000269844 C22orf23Q9BZE7 217 aa17.74■□□□□ 0.43
PRDM15-201ENST00000269844 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
PRDM15-201ENST00000269844 CENPJQ9HC77 1338 aaPredicted RBP17.73■□□□□ 0.43
PRDM15-201ENST00000269844 LMOD2Q6P5Q4 547 aa17.73■□□□□ 0.43
PRDM15-201ENST00000269844 APBB1O00213 710 aa17.73■□□□□ 0.43
PRDM15-201ENST00000269844 TULP1O00294 542 aaPredicted RBP17.73■□□□□ 0.43
PRDM15-201ENST00000269844 TAOK2Q9UL54 1235 aa17.73■□□□□ 0.43
PRDM15-201ENST00000269844 SENP3Q9H4L4 574 aaPredicted RBP17.72■□□□□ 0.43
PRDM15-201ENST00000269844 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
PRDM15-201ENST00000269844 DEF6Q9H4E7 631 aa17.72■□□□□ 0.43
PRDM15-201ENST00000269844 NUCB2P80303 420 aa17.71■□□□□ 0.43
PRDM15-201ENST00000269844 SASS6Q6UVJ0 657 aa17.71■□□□□ 0.43
PRDM15-201ENST00000269844 CGNL1Q0VF96 1302 aa17.71■□□□□ 0.43
PRDM15-201ENST00000269844 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
PRDM15-201ENST00000269844 AKNAQ7Z591 1439 aa17.71■□□□□ 0.42
PRDM15-201ENST00000269844 GOLGA6L19H0YKK7 550 aa17.7■□□□□ 0.42
PRDM15-201ENST00000269844 CALCOCO1Q9P1Z2 691 aa17.7■□□□□ 0.42
PRDM15-201ENST00000269844 TRERF1Q96PN7 1200 aa17.69■□□□□ 0.42
PRDM15-201ENST00000269844 WASHC2CQ9Y4E1 1318 aa17.68■□□□□ 0.42
PRDM15-201ENST00000269844 RDXP35241 583 aaKnown RBP17.68■□□□□ 0.42
PRDM15-201ENST00000269844 HDGFP51858 240 aaKnown RBP17.68■□□□□ 0.42
PRDM15-201ENST00000269844 XPCQ01831 940 aaPredicted RBP17.68■□□□□ 0.42
PRDM15-201ENST00000269844 COG6Q9Y2V7 657 aa17.68■□□□□ 0.42
PRDM15-201ENST00000269844 HOMER1Q86YM7 354 aa17.67■□□□□ 0.42
PRDM15-201ENST00000269844 MYBBP1AQ9BQG0 1328 aaKnown RBP17.67■□□□□ 0.42
PRDM15-201ENST00000269844 TMF1P82094 1093 aa17.67■□□□□ 0.42
PRDM15-201ENST00000269844 MNS1Q8NEH6 495 aa17.67■□□□□ 0.42
PRDM15-201ENST00000269844 DYNC1I1O14576 645 aa17.67■□□□□ 0.42
PRDM15-201ENST00000269844 LETM1O95202 739 aaPredicted RBP17.67■□□□□ 0.42
PRDM15-201ENST00000269844 LEKR1Q6ZMV7 388 aa17.66■□□□□ 0.42
PRDM15-201ENST00000269844 TPM3P06753 285 aa17.66■□□□□ 0.42
PRDM15-201ENST00000269844 BECN2A8MW95 431 aa17.66■□□□□ 0.42
PRDM15-201ENST00000269844 H0YHG0 523 aa17.66■□□□□ 0.42
PRDM15-201ENST00000269844 MPNDQ8N594 471 aa17.66■□□□□ 0.42
PRDM15-201ENST00000269844 PHLDB1Q86UU1 1377 aa17.65■□□□□ 0.42
PRDM15-201ENST00000269844 DNAJC2Q99543 621 aaKnown RBP17.65■□□□□ 0.42
PRDM15-201ENST00000269844 TPD52L1Q16890 204 aaPredicted RBP17.64■□□□□ 0.41
PRDM15-201ENST00000269844 HSP90B2PQ58FF3 399 aa17.64■□□□□ 0.41
PRDM15-201ENST00000269844 PPP4R3BQ5MIZ7 849 aa17.64■□□□□ 0.41
PRDM15-201ENST00000269844 SMAP1Q8IYB5 467 aaPredicted RBP17.64■□□□□ 0.41
PRDM15-201ENST00000269844 SOGA1O94964 1423 aa17.63■□□□□ 0.41
PRDM15-201ENST00000269844 GPATCH11Q8N954 259 aa17.63■□□□□ 0.41
PRDM15-201ENST00000269844 ATP6V1DQ9Y5K8 247 aa17.63■□□□□ 0.41
PRDM15-201ENST00000269844 AK7Q96M32 723 aa17.62■□□□□ 0.41
PRDM15-201ENST00000269844 RRAGDQ9NQL2 400 aaPredicted RBP17.62■□□□□ 0.41
PRDM15-201ENST00000269844 L3MBTL2Q969R5 705 aa17.62■□□□□ 0.41
PRDM15-201ENST00000269844 TIGD1Q96MW7 591 aa17.62■□□□□ 0.41
PRDM15-201ENST00000269844 HSP90AB3PQ58FF7 597 aa17.62■□□□□ 0.41
PRDM15-201ENST00000269844 SMC4Q9NTJ3 1288 aa17.61■□□□□ 0.41
PRDM15-201ENST00000269844 CCDC112Q8NEF3 446 aa17.61■□□□□ 0.41
PRDM15-201ENST00000269844 GTPBP4Q9BZE4 634 aaKnown RBP17.61■□□□□ 0.41
PRDM15-201ENST00000269844 KIF15Q9NS87 1388 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 SPDYE4A6NLX3 237 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.41
PRDM15-201ENST00000269844 CCDC146Q8IYE0 955 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 VGLL3A8MV65 326 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 DCAF11Q8TEB1 546 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 TSPY26PQ9H489 355 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 FOXD1Q16676 465 aa17.6■□□□□ 0.41
PRDM15-201ENST00000269844 OS9Q13438 667 aaPredicted RBP17.59■□□□□ 0.41
PRDM15-201ENST00000269844 PRPF40AO75400 957 aaKnown RBP17.59■□□□□ 0.41
PRDM15-201ENST00000269844 MBD3O95983 291 aa17.58■□□□□ 0.41
PRDM15-201ENST00000269844 ROCK2O75116 1388 aaKnown RBP17.58■□□□□ 0.41
PRDM15-201ENST00000269844 PANK2Q9BZ23 570 aa17.57■□□□□ 0.4
PRDM15-201ENST00000269844 ACBD3Q9H3P7 528 aa17.57■□□□□ 0.4
PRDM15-201ENST00000269844 USP8P40818 1118 aa17.55■□□□□ 0.4
PRDM15-201ENST00000269844 NBPF1Q3BBV0 1214 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms