RNA–Protein interactions for RNA: ENST00000266088.8

SLC5A1-201, Transcript of solute carrier family 5 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC5A1, Length 5,061 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC5A1-201ENST00000266088 GCC2Q8IWJ2 1684 aa11.1□□□□□ -0.63
SLC5A1-201ENST00000266088 NUTM2FA1L443 756 aa11.09□□□□□ -0.63
SLC5A1-201ENST00000266088 EID1Q9Y6B2 187 aa11.09□□□□□ -0.63
SLC5A1-201ENST00000266088 NUP153P49790 1475 aaKnown RBP11.09□□□□□ -0.63
SLC5A1-201ENST00000266088 DISP1Q96F81 1524 aa11.09□□□□□ -0.63
SLC5A1-201ENST00000266088 PNNQ9H307 717 aaKnown RBP11.08□□□□□ -0.64
SLC5A1-201ENST00000266088 ZNF644Q9H582 1327 aaPredicted RBP11.07□□□□□ -0.64
SLC5A1-201ENST00000266088 TRAK1Q9UPV9 953 aa11.07□□□□□ -0.64
SLC5A1-201ENST00000266088 CAMSAP2Q08AD1 1489 aa11.07□□□□□ -0.64
SLC5A1-201ENST00000266088 PRG4Q92954 1404 aaPredicted RBP11.07□□□□□ -0.64
SLC5A1-201ENST00000266088 FAM69CQ0P6D2 419 aa11.07□□□□□ -0.64
SLC5A1-201ENST00000266088 KTN1Q86UP2 1357 aaKnown RBP11.07□□□□□ -0.64
SLC5A1-201ENST00000266088 DNMT1P26358 1616 aaKnown RBP11.06□□□□□ -0.64
SLC5A1-201ENST00000266088 ABCC5O15440 1437 aa11.06□□□□□ -0.64
SLC5A1-201ENST00000266088 U2AF1L5P0DN76 240 aaPredicted RBP11.06□□□□□ -0.64
SLC5A1-201ENST00000266088 U2AF1Q01081 240 aaKnown RBP eCLIP11.06□□□□□ -0.64
SLC5A1-201ENST00000266088 NBR1Q14596 966 aa11.06□□□□□ -0.64
SLC5A1-201ENST00000266088 RGS3P49796 1198 aa11.05□□□□□ -0.64
SLC5A1-201ENST00000266088 ANKRD50Q9ULJ7 1429 aa11.05□□□□□ -0.64
SLC5A1-201ENST00000266088 NPHP1O15259 732 aa11.05□□□□□ -0.64
SLC5A1-201ENST00000266088 ANP32EQ9BTT0 268 aa11.05□□□□□ -0.64
SLC5A1-201ENST00000266088 ANP32BQ92688 251 aaKnown RBP11.04□□□□□ -0.64
SLC5A1-201ENST00000266088 SHANK2Q9UPX8 1470 aa11.04□□□□□ -0.64
SLC5A1-201ENST00000266088 PTPRKQ15262 1439 aa11.04□□□□□ -0.64
SLC5A1-201ENST00000266088 KIAA1107Q9UPP5 1409 aa11.03□□□□□ -0.64
SLC5A1-201ENST00000266088 CCDC144AA2RUR9 1427 aa11.03□□□□□ -0.64
SLC5A1-201ENST00000266088 CSB-PGBD3P0DP91 1061 aa11.03□□□□□ -0.64
SLC5A1-201ENST00000266088 RTF1Q92541 710 aaKnown RBP11.03□□□□□ -0.64
SLC5A1-201ENST00000266088 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
SLC5A1-201ENST00000266088 NGDNQ8NEJ9 315 aaKnown RBP11.03□□□□□ -0.64
SLC5A1-201ENST00000266088 C9orf84Q5VXU9 1444 aa11.02□□□□□ -0.64
SLC5A1-201ENST00000266088 EIF3AQ14152 1382 aaKnown RBP11.02□□□□□ -0.65
SLC5A1-201ENST00000266088 GLIPR1L2Q4G1C9 344 aa11.02□□□□□ -0.65
SLC5A1-201ENST00000266088 PLB1Q6P1J6 1458 aa11.02□□□□□ -0.65
SLC5A1-201ENST00000266088 TERF2IPQ9NYB0 399 aa11.02□□□□□ -0.65
SLC5A1-201ENST00000266088 B4GALNT3Q6L9W6 998 aa11.01□□□□□ -0.65
SLC5A1-201ENST00000266088 CEP170Q5SW79 1584 aa11.01□□□□□ -0.65
SLC5A1-201ENST00000266088 GPATCH8Q9UKJ3 1502 aaKnown RBP11.01□□□□□ -0.65
SLC5A1-201ENST00000266088 ADGRL2O95490 1459 aa11.01□□□□□ -0.65
SLC5A1-201ENST00000266088 MAGI3Q5TCQ9 1506 aa11□□□□□ -0.65
SLC5A1-201ENST00000266088 OS9Q13438 667 aaPredicted RBP11□□□□□ -0.65
SLC5A1-201ENST00000266088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
SLC5A1-201ENST00000266088 ADGBQ8N7X0 1667 aa11□□□□□ -0.65
SLC5A1-201ENST00000266088 PPP4R2Q9NY27 417 aa11□□□□□ -0.65
SLC5A1-201ENST00000266088 RALBP1Q15311 655 aa11□□□□□ -0.65
SLC5A1-201ENST00000266088 KIF15Q9NS87 1388 aa11□□□□□ -0.65
SLC5A1-201ENST00000266088 RPRD2Q5VT52 1461 aaKnown RBP11□□□□□ -0.65
SLC5A1-201ENST00000266088 NCOA1Q15788 1441 aa10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 ANKRD30BQ9BXX2 1392 aa10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 CCDC141Q6ZP82 1450 aa10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 ERICH6BQ5W0A0 696 aa10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 ADCY10Q96PN6 1610 aa10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 MS4A1P11836 297 aa10.99□□□□□ -0.65
SLC5A1-201ENST00000266088 STAC3Q96MF2 364 aa10.98□□□□□ -0.65
SLC5A1-201ENST00000266088 CNTLNQ9NXG0 1405 aa10.98□□□□□ -0.65
SLC5A1-201ENST00000266088 AFAP1Q8N556 730 aa10.98□□□□□ -0.65
SLC5A1-201ENST00000266088 ARHGAP5Q13017 1502 aa10.97□□□□□ -0.65
SLC5A1-201ENST00000266088 BECN1Q14457 450 aa10.97□□□□□ -0.65
SLC5A1-201ENST00000266088 CHMP4BQ9H444 224 aaKnown RBP10.97□□□□□ -0.65
SLC5A1-201ENST00000266088 CASC1Q6TDU7 716 aa10.97□□□□□ -0.65
SLC5A1-201ENST00000266088 LTV1Q96GA3 475 aaPredicted RBP10.97□□□□□ -0.65
SLC5A1-201ENST00000266088 ZNF330Q9Y3S2 320 aaPredicted RBP10.96□□□□□ -0.65
SLC5A1-201ENST00000266088 ABCA8O94911 1581 aa10.96□□□□□ -0.66
SLC5A1-201ENST00000266088 ATP10BO94823 1461 aa10.96□□□□□ -0.66
SLC5A1-201ENST00000266088 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
SLC5A1-201ENST00000266088 CCDC146Q8IYE0 955 aa10.95□□□□□ -0.66
SLC5A1-201ENST00000266088 TSHZ2Q9NRE2 1034 aa10.95□□□□□ -0.66
SLC5A1-201ENST00000266088 PANK3Q9H999 370 aa10.95□□□□□ -0.66
SLC5A1-201ENST00000266088 CCDC9Q9Y3X0 531 aaKnown RBP10.95□□□□□ -0.66
SLC5A1-201ENST00000266088 MINK1Q8N4C8 1332 aaPredicted RBP10.95□□□□□ -0.66
SLC5A1-201ENST00000266088 AMPHP49418 695 aa10.94□□□□□ -0.66
SLC5A1-201ENST00000266088 NLRP13Q86W25 1043 aa10.94□□□□□ -0.66
SLC5A1-201ENST00000266088 LRRIQ1Q96JM4 1722 aa10.94□□□□□ -0.66
SLC5A1-201ENST00000266088 ARHGEF5Q12774 1597 aa10.93□□□□□ -0.66
SLC5A1-201ENST00000266088 APBB1O00213 710 aa10.93□□□□□ -0.66
SLC5A1-201ENST00000266088 DDRGK1Q96HY6 314 aa10.93□□□□□ -0.66
SLC5A1-201ENST00000266088 USP47Q96K76 1375 aa10.92□□□□□ -0.66
SLC5A1-201ENST00000266088 TAOK2Q9UL54 1235 aa10.92□□□□□ -0.66
SLC5A1-201ENST00000266088 TPRNQ4KMQ1 711 aa10.91□□□□□ -0.66
SLC5A1-201ENST00000266088 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
SLC5A1-201ENST00000266088 CALD1Q05682 793 aaKnown RBP10.91□□□□□ -0.66
SLC5A1-201ENST00000266088 GOLGA2Q08379 1002 aa10.91□□□□□ -0.66
SLC5A1-201ENST00000266088 IPO8O15397 1037 aaKnown RBP10.9□□□□□ -0.66
SLC5A1-201ENST00000266088 ARHGEF12Q9NZN5 1544 aa10.9□□□□□ -0.66
SLC5A1-201ENST00000266088 KCNJ4P48050 445 aa10.9□□□□□ -0.66
SLC5A1-201ENST00000266088 EVC2Q86UK5 1308 aa10.9□□□□□ -0.67
SLC5A1-201ENST00000266088 ABCC2Q92887 1545 aa10.89□□□□□ -0.67
SLC5A1-201ENST00000266088 RRP7AQ9Y3A4 280 aaKnown RBP10.89□□□□□ -0.67
SLC5A1-201ENST00000266088 ITPRIPQ8IWB1 547 aa10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 WASHC2AQ641Q2 1341 aa10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 FGD1P98174 961 aa10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 ABCC10Q5T3U5 1492 aa10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 NCLP19338 710 aaKnown RBP10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 CLUAP1Q96AJ1 413 aa10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 PRKRIP1Q9H875 184 aaPredicted RBP10.88□□□□□ -0.67
SLC5A1-201ENST00000266088 RBM19Q9Y4C8 960 aaKnown RBP10.87□□□□□ -0.67
SLC5A1-201ENST00000266088 STK31Q9BXU1 1019 aa10.87□□□□□ -0.67
SLC5A1-201ENST00000266088 SMC4Q9NTJ3 1288 aa10.87□□□□□ -0.67
SLC5A1-201ENST00000266088 COG3Q96JB2 828 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms