RNA–Protein interactions for RNA: ENST00000265810.8

PDLIM2-201, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-201ENST00000265810 LMOD2Q6P5Q4 547 aa19.25■□□□□ 0.67
PDLIM2-201ENST00000265810 MORC1Q86VD1 984 aa19.23■□□□□ 0.67
PDLIM2-201ENST00000265810 PLCH2O75038 1416 aa19.23■□□□□ 0.67
PDLIM2-201ENST00000265810 NBPF8Q3BBV2 869 aa19.22■□□□□ 0.67
PDLIM2-201ENST00000265810 KTN1Q86UP2 1357 aaKnown RBP19.21■□□□□ 0.67
PDLIM2-201ENST00000265810 NEUROD2Q15784 382 aa19.21■□□□□ 0.67
PDLIM2-201ENST00000265810 CFAP43Q8NDM7 1665 aa19.2■□□□□ 0.66
PDLIM2-201ENST00000265810 IRX6P78412 446 aaPredicted RBP19.2■□□□□ 0.66
PDLIM2-201ENST00000265810 STAC3Q96MF2 364 aa19.2■□□□□ 0.66
PDLIM2-201ENST00000265810 HDGFL2Q7Z4V5 671 aaPredicted RBP19.19■□□□□ 0.66
PDLIM2-201ENST00000265810 BCL11AQ9H165 835 aa19.19■□□□□ 0.66
PDLIM2-201ENST00000265810 WDR7Q9Y4E6 1490 aa19.19■□□□□ 0.66
PDLIM2-201ENST00000265810 SOX12O15370 315 aa19.19■□□□□ 0.66
PDLIM2-201ENST00000265810 ABCC2Q92887 1545 aa19.19■□□□□ 0.66
PDLIM2-201ENST00000265810 NUDCQ9Y266 331 aa19.18■□□□□ 0.66
PDLIM2-201ENST00000265810 U2SURPO15042 1029 aaKnown RBP19.17■□□□□ 0.66
PDLIM2-201ENST00000265810 CFAP70Q5T0N1 1121 aa19.17■□□□□ 0.66
PDLIM2-201ENST00000265810 NUTM2FA1L443 756 aa19.17■□□□□ 0.66
PDLIM2-201ENST00000265810 NBPF1Q3BBV0 1214 aa19.17■□□□□ 0.66
PDLIM2-201ENST00000265810 TMEM132EQ6IEE7 984 aa19.16■□□□□ 0.66
PDLIM2-201ENST00000265810 PANK3Q9H999 370 aa19.16■□□□□ 0.66
PDLIM2-201ENST00000265810 RALBP1Q15311 655 aa19.15■□□□□ 0.66
PDLIM2-201ENST00000265810 ANKRD30BQ9BXX2 1392 aa19.15■□□□□ 0.66
PDLIM2-201ENST00000265810 DAXXQ9UER7 740 aaPredicted RBP19.15■□□□□ 0.66
PDLIM2-201ENST00000265810 DENND4BO75064 1496 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-201ENST00000265810 MINK1Q8N4C8 1332 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-201ENST00000265810 HAP1P54257 671 aaPredicted RBP19.13■□□□□ 0.65
PDLIM2-201ENST00000265810 ZBTB47Q9UFB7 747 aaPredicted RBP19.12■□□□□ 0.65
PDLIM2-201ENST00000265810 TERF2IPQ9NYB0 399 aa19.11■□□□□ 0.65
PDLIM2-201ENST00000265810 SYCP2Q9BX26 1530 aa19.11■□□□□ 0.65
PDLIM2-201ENST00000265810 KIF7Q2M1P5 1343 aa19.11■□□□□ 0.65
PDLIM2-201ENST00000265810 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
PDLIM2-201ENST00000265810 TCOF1Q13428 1488 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-201ENST00000265810 MAPK8IP3Q9UPT6 1336 aa19.1■□□□□ 0.65
PDLIM2-201ENST00000265810 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-201ENST00000265810 TRAPPC8Q9Y2L5 1435 aa19.1■□□□□ 0.65
PDLIM2-201ENST00000265810 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.09■□□□□ 0.65
PDLIM2-201ENST00000265810 ITSN2Q9NZM3 1697 aa19.09■□□□□ 0.65
PDLIM2-201ENST00000265810 SUPT16HQ9Y5B9 1047 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-201ENST00000265810 MAGI3Q5TCQ9 1506 aa19.08■□□□□ 0.65
PDLIM2-201ENST00000265810 EVC2Q86UK5 1308 aa19.08■□□□□ 0.64
PDLIM2-201ENST00000265810 CENPJQ9HC77 1338 aaPredicted RBP19.08■□□□□ 0.64
PDLIM2-201ENST00000265810 DHX29Q7Z478 1369 aaKnown RBP19.08■□□□□ 0.64
PDLIM2-201ENST00000265810 CCDC7Q96M83 1385 aa19.08■□□□□ 0.64
PDLIM2-201ENST00000265810 PRKRIP1Q9H875 184 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-201ENST00000265810 WASHC2AQ641Q2 1341 aa19.07■□□□□ 0.64
PDLIM2-201ENST00000265810 PAK3O75914 559 aaPredicted RBP19.07■□□□□ 0.64
PDLIM2-201ENST00000265810 CHD1O14646 1710 aa19.06■□□□□ 0.64
PDLIM2-201ENST00000265810 NLRP13Q86W25 1043 aa19.05■□□□□ 0.64
PDLIM2-201ENST00000265810 CCDC136Q96JN2 1154 aa19.05■□□□□ 0.64
PDLIM2-201ENST00000265810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.04■□□□□ 0.64
PDLIM2-201ENST00000265810 NGDNQ8NEJ9 315 aaKnown RBP19.03■□□□□ 0.64
PDLIM2-201ENST00000265810 ERBINQ96RT1 1412 aa19.02■□□□□ 0.64
PDLIM2-201ENST00000265810 TXNDC2Q86VQ3 553 aa19.01■□□□□ 0.63
PDLIM2-201ENST00000265810 LAS1LQ9Y4W2 734 aaKnown RBP19.01■□□□□ 0.63
PDLIM2-201ENST00000265810 FBXO31Q5XUX0 539 aaPredicted RBP19■□□□□ 0.63
PDLIM2-201ENST00000265810 U2AF1L5P0DN76 240 aaPredicted RBP19■□□□□ 0.63
PDLIM2-201ENST00000265810 U2AF1Q01081 240 aaKnown RBP eCLIP19■□□□□ 0.63
PDLIM2-201ENST00000265810 ABCA8O94911 1581 aa18.99■□□□□ 0.63
PDLIM2-201ENST00000265810 ZNF518AQ6AHZ1 1483 aa18.97■□□□□ 0.63
PDLIM2-201ENST00000265810 MYBBP1AQ9BQG0 1328 aaKnown RBP18.97■□□□□ 0.63
PDLIM2-201ENST00000265810 A0A0G2JS52 829 aa18.96■□□□□ 0.63
PDLIM2-201ENST00000265810 POGZQ7Z3K3 1410 aa18.96■□□□□ 0.63
PDLIM2-201ENST00000265810 IDI1Q13907 227 aa18.96■□□□□ 0.63
PDLIM2-201ENST00000265810 PNNQ9H307 717 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-201ENST00000265810 CABP2Q9NPB3 220 aa18.95■□□□□ 0.62
PDLIM2-201ENST00000265810 RPRD2Q5VT52 1461 aaKnown RBP18.95■□□□□ 0.62
PDLIM2-201ENST00000265810 ERCC6L2Q5T890 1561 aa18.95■□□□□ 0.62
PDLIM2-201ENST00000265810 RPGRIP1LQ68CZ1 1315 aa18.94■□□□□ 0.62
PDLIM2-201ENST00000265810 DUOX2Q9NRD8 1548 aa18.94■□□□□ 0.62
PDLIM2-201ENST00000265810 KDM5BQ9UGL1 1544 aa18.94■□□□□ 0.62
PDLIM2-201ENST00000265810 THEMISQ8N1K5 641 aaPredicted RBP18.93■□□□□ 0.62
PDLIM2-201ENST00000265810 MAPKBP1O60336 1514 aa18.93■□□□□ 0.62
PDLIM2-201ENST00000265810 A2MP01023 1474 aa18.93■□□□□ 0.62
PDLIM2-201ENST00000265810 CGNL1Q0VF96 1302 aa18.93■□□□□ 0.62
PDLIM2-201ENST00000265810 CEBPAP49715 358 aaPredicted RBP18.92■□□□□ 0.62
PDLIM2-201ENST00000265810 PRAM1Q96QH2 718 aa18.92■□□□□ 0.62
PDLIM2-201ENST00000265810 TEX14Q8IWB6 1497 aa18.92■□□□□ 0.62
PDLIM2-201ENST00000265810 ABCC10Q5T3U5 1492 aa18.91■□□□□ 0.62
PDLIM2-201ENST00000265810 DNMT1P26358 1616 aaKnown RBP18.9■□□□□ 0.62
PDLIM2-201ENST00000265810 CNTLNQ9NXG0 1405 aa18.9■□□□□ 0.62
PDLIM2-201ENST00000265810 SHANK2Q9UPX8 1470 aa18.9■□□□□ 0.62
PDLIM2-201ENST00000265810 CCDC146Q8IYE0 955 aa18.9■□□□□ 0.62
PDLIM2-201ENST00000265810 SLC26A8Q96RN1 970 aa18.9■□□□□ 0.62
PDLIM2-201ENST00000265810 UHRF1BP1LA0JNW5 1464 aa18.89■□□□□ 0.61
PDLIM2-201ENST00000265810 ADGRF5Q8IZF2 1346 aa18.88■□□□□ 0.61
PDLIM2-201ENST00000265810 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.87■□□□□ 0.61
PDLIM2-201ENST00000265810 FRAT1Q92837 279 aaPredicted RBP18.86■□□□□ 0.61
PDLIM2-201ENST00000265810 RTEL1-TNFRSF6BF6WH68 1400 aa18.86■□□□□ 0.61
PDLIM2-201ENST00000265810 PPP6R1Q9UPN7 881 aa18.85■□□□□ 0.61
PDLIM2-201ENST00000265810 COG3Q96JB2 828 aa18.84■□□□□ 0.61
PDLIM2-201ENST00000265810 SLC12A5Q9H2X9 1139 aa18.84■□□□□ 0.61
PDLIM2-201ENST00000265810 C11orf95C9JLR9 678 aaPredicted RBP18.84■□□□□ 0.61
PDLIM2-201ENST00000265810 FAM135AQ9P2D6 1515 aa18.84■□□□□ 0.61
PDLIM2-201ENST00000265810 AMPHP49418 695 aa18.82■□□□□ 0.6
PDLIM2-201ENST00000265810 GGNBP2Q9H3C7 697 aa18.82■□□□□ 0.6
PDLIM2-201ENST00000265810 ADGRL2O95490 1459 aa18.81■□□□□ 0.6
PDLIM2-201ENST00000265810 FTSJ3Q8IY81 847 aaKnown RBP18.8■□□□□ 0.6
PDLIM2-201ENST00000265810 LTV1Q96GA3 475 aaPredicted RBP18.8■□□□□ 0.6
PDLIM2-201ENST00000265810 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms