RNA–Protein interactions for RNA: ENST00000265562.4

PTPN23-201, Transcript of protein tyrosine phosphatase, non-receptor type 23, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN23, Length 5,244 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23-201ENST00000265562 NFKBIBQ15653 356 aa17.33■□□□□ 0.36
PTPN23-201ENST00000265562 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.36
PTPN23-201ENST00000265562 STK31Q9BXU1 1019 aa17.32■□□□□ 0.36
PTPN23-201ENST00000265562 HSP90B1P14625 803 aaKnown RBP17.32■□□□□ 0.36
PTPN23-201ENST00000265562 E9PSI1 815 aa17.32■□□□□ 0.36
PTPN23-201ENST00000265562 FAM43AQ8N2R8 423 aa17.32■□□□□ 0.36
PTPN23-201ENST00000265562 PDS5BQ9NTI5 1447 aa17.31■□□□□ 0.36
PTPN23-201ENST00000265562 GPATCH3Q96I76 525 aa17.31■□□□□ 0.36
PTPN23-201ENST00000265562 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.31■□□□□ 0.36
PTPN23-201ENST00000265562 KIF16BQ96L93 1317 aa17.31■□□□□ 0.36
PTPN23-201ENST00000265562 STK26Q9P289 416 aa17.31■□□□□ 0.36
PTPN23-201ENST00000265562 NOC3LQ8WTT2 800 aaKnown RBP17.3■□□□□ 0.36
PTPN23-201ENST00000265562 CCDC34Q96HJ3 373 aa17.3■□□□□ 0.36
PTPN23-201ENST00000265562 ST20-MTHFSA0A0A6YYL1 179 aa17.3■□□□□ 0.36
PTPN23-201ENST00000265562 ZNF771Q7L3S4 317 aaPredicted RBP17.29■□□□□ 0.36
PTPN23-201ENST00000265562 COG6Q9Y2V7 657 aa17.29■□□□□ 0.36
PTPN23-201ENST00000265562 TOP2AP11388 1531 aaKnown RBP17.29■□□□□ 0.36
PTPN23-201ENST00000265562 PANK3Q9H999 370 aa17.28■□□□□ 0.36
PTPN23-201ENST00000265562 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
PTPN23-201ENST00000265562 ZKSCAN2Q63HK3 967 aa17.28■□□□□ 0.36
PTPN23-201ENST00000265562 ANKRD45Q5TZF3 282 aa17.28■□□□□ 0.36
PTPN23-201ENST00000265562 CHMP4AQ9BY43 222 aa17.27■□□□□ 0.36
PTPN23-201ENST00000265562 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
PTPN23-201ENST00000265562 RRP7AQ9Y3A4 280 aaKnown RBP17.26■□□□□ 0.35
PTPN23-201ENST00000265562 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
PTPN23-201ENST00000265562 SPAG9O60271 1321 aaKnown RBP17.26■□□□□ 0.35
PTPN23-201ENST00000265562 HDAC5Q9UQL6 1122 aa17.25■□□□□ 0.35
PTPN23-201ENST00000265562 HDGFP51858 240 aaKnown RBP17.25■□□□□ 0.35
PTPN23-201ENST00000265562 LMOD3Q0VAK6 560 aa17.25■□□□□ 0.35
PTPN23-201ENST00000265562 GOLGA6L19H0YKK7 550 aa17.24■□□□□ 0.35
PTPN23-201ENST00000265562 KIF3AQ9Y496 699 aa17.24■□□□□ 0.35
PTPN23-201ENST00000265562 CARMIL2Q6F5E8 1435 aa17.24■□□□□ 0.35
PTPN23-201ENST00000265562 TPM3P06753 285 aa17.23■□□□□ 0.35
PTPN23-201ENST00000265562 TERF2IPQ9NYB0 399 aa17.23■□□□□ 0.35
PTPN23-201ENST00000265562 NPHP1O15259 732 aa17.23■□□□□ 0.35
PTPN23-201ENST00000265562 MRE11P49959 708 aa17.23■□□□□ 0.35
PTPN23-201ENST00000265562 TDRD9Q8NDG6 1382 aaKnown RBP17.22■□□□□ 0.35
PTPN23-201ENST00000265562 FOXD4L6Q3SYB3 417 aaPredicted RBP17.22■□□□□ 0.35
PTPN23-201ENST00000265562 FOXD4L3Q6VB84 417 aaPredicted RBP17.22■□□□□ 0.35
PTPN23-201ENST00000265562 USP47Q96K76 1375 aa17.22■□□□□ 0.35
PTPN23-201ENST00000265562 SF3A1Q15459 793 aaKnown RBP17.22■□□□□ 0.35
PTPN23-201ENST00000265562 BECN2A8MW95 431 aa17.21■□□□□ 0.35
PTPN23-201ENST00000265562 RAPGEF2Q9Y4G8 1499 aa17.21■□□□□ 0.35
PTPN23-201ENST00000265562 WIZO95785 1651 aa17.2■□□□□ 0.34
PTPN23-201ENST00000265562 ANO8Q9HCE9 1232 aaPredicted RBP17.2■□□□□ 0.34
PTPN23-201ENST00000265562 SETQ01105 290 aaPredicted RBP17.2■□□□□ 0.34
PTPN23-201ENST00000265562 BRPF3Q9ULD4 1205 aa17.2■□□□□ 0.34
PTPN23-201ENST00000265562 ZNF592Q92610 1267 aa17.2■□□□□ 0.34
PTPN23-201ENST00000265562 GPS2Q13227 327 aa17.19■□□□□ 0.34
PTPN23-201ENST00000265562 GGT6Q6P531 493 aa17.19■□□□□ 0.34
PTPN23-201ENST00000265562 CADPSQ9ULU8 1353 aa17.19■□□□□ 0.34
PTPN23-201ENST00000265562 RILPL2Q969X0 211 aa17.19■□□□□ 0.34
PTPN23-201ENST00000265562 DDX19BQ9UMR2 479 aa17.19■□□□□ 0.34
PTPN23-201ENST00000265562 APAF1O14727 1248 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 REC8O95072 547 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 A0A0U1RQG5 324 aaPredicted RBP17.18■□□□□ 0.34
PTPN23-201ENST00000265562 IL27Q8NEV9 243 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 MAP7D2Q96T17 732 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 FHOD3Q2V2M9 1422 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 H3BQV1 296 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 CLSTN1O94985 981 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 IFFO2Q5TF58 517 aa17.18■□□□□ 0.34
PTPN23-201ENST00000265562 NUCB2P80303 420 aa17.17■□□□□ 0.34
PTPN23-201ENST00000265562 NGEFQ8N5V2 710 aa17.17■□□□□ 0.34
PTPN23-201ENST00000265562 GORABQ5T7V8 394 aa17.17■□□□□ 0.34
PTPN23-201ENST00000265562 MTERF4Q7Z6M4 381 aaKnown RBP17.17■□□□□ 0.34
PTPN23-201ENST00000265562 CCAR2Q8N163 923 aaKnown RBP17.17■□□□□ 0.34
PTPN23-201ENST00000265562 CCDC18Q5T9S5 1454 aa17.17■□□□□ 0.34
PTPN23-201ENST00000265562 C22orf23Q9BZE7 217 aa17.16■□□□□ 0.34
PTPN23-201ENST00000265562 CREBRFQ8IUR6 639 aa17.15■□□□□ 0.34
PTPN23-201ENST00000265562 R3HCC1Q9Y3T6 440 aaKnown RBP17.15■□□□□ 0.34
PTPN23-201ENST00000265562 TEX35Q5T0J7 233 aa17.14■□□□□ 0.34
PTPN23-201ENST00000265562 CCDC7Q96M83 1385 aa17.14■□□□□ 0.34
PTPN23-201ENST00000265562 DZIP1LQ8IYY4 767 aaKnown RBP17.14■□□□□ 0.33
PTPN23-201ENST00000265562 FAM184AQ8NB25 1140 aa17.14■□□□□ 0.33
PTPN23-201ENST00000265562 ISY1Q9ULR0 285 aaKnown RBP17.14■□□□□ 0.33
PTPN23-201ENST00000265562 TPM2P07951 284 aa17.14■□□□□ 0.33
PTPN23-201ENST00000265562 NASPP49321 788 aaPredicted RBP17.14■□□□□ 0.33
PTPN23-201ENST00000265562 CNTLNQ9NXG0 1405 aa17.14■□□□□ 0.33
PTPN23-201ENST00000265562 MCTP1Q6DN14 999 aa17.13■□□□□ 0.33
PTPN23-201ENST00000265562 ELL2O00472 640 aaPredicted RBP17.13■□□□□ 0.33
PTPN23-201ENST00000265562 PAK3O75914 559 aaPredicted RBP17.13■□□□□ 0.33
PTPN23-201ENST00000265562 ATAD2BQ9ULI0 1458 aa17.12■□□□□ 0.33
PTPN23-201ENST00000265562 RASSF8Q8NHQ8 419 aa17.12■□□□□ 0.33
PTPN23-201ENST00000265562 CHMP4CQ96CF2 233 aa17.12■□□□□ 0.33
PTPN23-201ENST00000265562 TRAK2O60296 914 aa17.12■□□□□ 0.33
PTPN23-201ENST00000265562 CCDC144AA2RUR9 1427 aa17.12■□□□□ 0.33
PTPN23-201ENST00000265562 PKNOX2Q96KN3 472 aa17.11■□□□□ 0.33
PTPN23-201ENST00000265562 CCDC39Q9UFE4 941 aa17.11■□□□□ 0.33
PTPN23-201ENST00000265562 FRAT2O75474 233 aaPredicted RBP17.11■□□□□ 0.33
PTPN23-201ENST00000265562 AAMPQ13685 434 aa17.11■□□□□ 0.33
PTPN23-201ENST00000265562 EFCAB2Q5VUJ9 269 aa17.11■□□□□ 0.33
PTPN23-201ENST00000265562 CHMP3Q9Y3E7 222 aa17.11■□□□□ 0.33
PTPN23-201ENST00000265562 HNRNPMP52272 730 aaKnown RBP eCLIP17.11■□□□□ 0.336e-7■■■□□ 17.8
PTPN23-201ENST00000265562 KIF7Q2M1P5 1343 aa17.1■□□□□ 0.33
PTPN23-201ENST00000265562 RSPH4AQ5TD94 716 aa17.1■□□□□ 0.33
PTPN23-201ENST00000265562 DIAPH3Q9NSV4 1193 aa17.09■□□□□ 0.33
PTPN23-201ENST00000265562 TSR1Q2NL82 804 aaKnown RBP17.08■□□□□ 0.32
PTPN23-201ENST00000265562 TPM1P09493 284 aa17.08■□□□□ 0.32
PTPN23-201ENST00000265562 TPD52L1Q16890 204 aaPredicted RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms