RNA–Protein interactions for RNA: ENST00000263735.8

EPCAM-201, Transcript of epithelial cell adhesion molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPCAM, Length 1,724 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-201ENST00000263735 DHX29Q7Z478 1369 aaKnown RBP34.73■■■■□ 3.15
EPCAM-201ENST00000263735 SIN3AQ96ST3 1273 aa34.73■■■■□ 3.15
EPCAM-201ENST00000263735 DIP2CQ9Y2E4 1556 aa34.72■■■■□ 3.15
EPCAM-201ENST00000263735 A2MP01023 1474 aa34.71■■■■□ 3.15
EPCAM-201ENST00000263735 RAPGEF3O95398 923 aa34.7■■■■□ 3.15
EPCAM-201ENST00000263735 TIMELESSQ9UNS1 1208 aa34.69■■■■□ 3.14
EPCAM-201ENST00000263735 ANKRD30BQ9BXX2 1392 aa34.68■■■■□ 3.14
EPCAM-201ENST00000263735 RNF17Q9BXT8 1623 aaKnown RBP34.67■■■■□ 3.14
EPCAM-201ENST00000263735 PRDM15P57071 1507 aaPredicted RBP34.67■■■■□ 3.14
EPCAM-201ENST00000263735 NEUROD1Q13562 356 aa34.66■■■■□ 3.14
EPCAM-201ENST00000263735 MROH1Q8NDA8 1641 aa34.65■■■■□ 3.14
EPCAM-201ENST00000263735 PKD2Q13563 968 aa34.62■■■■□ 3.13
EPCAM-201ENST00000263735 FOXD1Q16676 465 aa34.62■■■■□ 3.13
EPCAM-201ENST00000263735 VWDEQ8N2E2 1590 aa34.62■■■■□ 3.13
EPCAM-201ENST00000263735 TET3O43151 1660 aa34.6■■■■□ 3.13
EPCAM-201ENST00000263735 RPRD2Q5VT52 1461 aaKnown RBP34.58■■■■□ 3.13
EPCAM-201ENST00000263735 GRWD1Q9BQ67 446 aaKnown RBP eCLIP34.57■■■■□ 3.12
EPCAM-201ENST00000263735 TONSLQ96HA7 1378 aa34.56■■■■□ 3.12
EPCAM-201ENST00000263735 E9PCH4 1651 aa34.55■■■■□ 3.12
EPCAM-201ENST00000263735 YEATS2Q9ULM3 1422 aa34.53■■■■□ 3.12
EPCAM-201ENST00000263735 KIF3BO15066 747 aa34.53■■■■□ 3.12
EPCAM-201ENST00000263735 KANK1Q14678 1352 aa34.53■■■■□ 3.12
EPCAM-201ENST00000263735 REREQ9P2R6 1566 aa34.52■■■■□ 3.12
EPCAM-201ENST00000263735 CEP152O94986 1710 aa34.52■■■■□ 3.12
EPCAM-201ENST00000263735 COL17A1Q9UMD9 1497 aaPredicted RBP34.49■■■■□ 3.11
EPCAM-201ENST00000263735 SPHKAPQ2M3C7 1700 aa34.47■■■■□ 3.11
EPCAM-201ENST00000263735 ARHGEF40Q8TER5 1519 aa34.46■■■■□ 3.11
EPCAM-201ENST00000263735 LMTK2Q8IWU2 1503 aa34.45■■■■□ 3.11
EPCAM-201ENST00000263735 ATP10AO60312 1499 aa34.44■■■■□ 3.1
EPCAM-201ENST00000263735 ZC3H13Q5T200 1668 aaKnown RBP34.43■■■■□ 3.1
EPCAM-201ENST00000263735 EFCAB6Q5THR3 1501 aa34.41■■■■□ 3.1
EPCAM-201ENST00000263735 PPP1R15AO75807 674 aaPredicted RBP34.38■■■■□ 3.09
EPCAM-201ENST00000263735 TRHP20396 242 aaPredicted RBP34.36■■■■□ 3.09
EPCAM-201ENST00000263735 AGLP35573 1532 aa34.36■■■■□ 3.09
EPCAM-201ENST00000263735 PLA2R1Q13018 1463 aa34.34■■■■□ 3.09
EPCAM-201ENST00000263735 CAMSAP1Q5T5Y3 1602 aa34.34■■■■□ 3.09
EPCAM-201ENST00000263735 TRPM2O94759 1503 aa34.33■■■■□ 3.09
EPCAM-201ENST00000263735 CCDC144AA2RUR9 1427 aa34.32■■■■□ 3.09
EPCAM-201ENST00000263735 ABCC3O15438 1527 aa34.32■■■■□ 3.08
EPCAM-201ENST00000263735 SIGLEC1Q9BZZ2 1709 aa34.31■■■■□ 3.08
EPCAM-201ENST00000263735 PTPRTO14522 1441 aa34.27■■■■□ 3.08
EPCAM-201ENST00000263735 GGT6Q6P531 493 aa34.27■■■■□ 3.08
EPCAM-201ENST00000263735 L3MBTL2Q969R5 705 aa34.25■■■■□ 3.07
EPCAM-201ENST00000263735 CFAP65Q6ZU64 1925 aaKnown RBP34.24■■■■□ 3.07
EPCAM-201ENST00000263735 CLTCL1P53675 1640 aa34.22■■■■□ 3.07
EPCAM-201ENST00000263735 KIF1BO60333 1816 aa34.19■■■■□ 3.06
EPCAM-201ENST00000263735 ZNF316A6NFI3 1004 aaPredicted RBP34.18■■■■□ 3.06
EPCAM-201ENST00000263735 WASHC2CQ9Y4E1 1318 aa34.18■■■■□ 3.06
EPCAM-201ENST00000263735 NPATQ14207 1427 aa34.15■■■■□ 3.06
EPCAM-201ENST00000263735 NEURL4Q96JN8 1562 aa34.14■■■■□ 3.06
EPCAM-201ENST00000263735 ARHGAP31Q2M1Z3 1444 aa34.13■■■■□ 3.05
EPCAM-201ENST00000263735 CLTCQ00610 1675 aaKnown RBP34.11■■■■□ 3.05
EPCAM-201ENST00000263735 PPP6R1Q9UPN7 881 aa34.1■■■■□ 3.05
EPCAM-201ENST00000263735 PREX1Q8TCU6 1659 aa34.08■■■■□ 3.05
EPCAM-201ENST00000263735 CNTLNQ9NXG0 1405 aa34.07■■■■□ 3.04
EPCAM-201ENST00000263735 UHRF1BP1Q6BDS2 1440 aa34.06■■■■□ 3.04
EPCAM-201ENST00000263735 SPATA31E1Q6ZUB1 1445 aa34.05■■■■□ 3.04
EPCAM-201ENST00000263735 PIK3C2BO00750 1634 aa34.03■■■■□ 3.04
EPCAM-201ENST00000263735 UGGT1Q9NYU2 1555 aa34.02■■■■□ 3.04
EPCAM-201ENST00000263735 NOS1P29475 1434 aa34.01■■■■□ 3.04
EPCAM-201ENST00000263735 MROH2AA6NES4 1674 aa34.01■■■■□ 3.04
EPCAM-201ENST00000263735 SYNMO15061 1565 aa34■■■■□ 3.03
EPCAM-201ENST00000263735 IFT172Q9UG01 1749 aa33.99■■■■□ 3.03
EPCAM-201ENST00000263735 NBPF8Q3BBV2 869 aa33.98■■■■□ 3.03
EPCAM-201ENST00000263735 TRPM1Q7Z4N2 1603 aa33.95■■■■□ 3.03
EPCAM-201ENST00000263735 DCAF11Q8TEB1 546 aa33.94■■■■□ 3.02
EPCAM-201ENST00000263735 ADGRB3O60242 1522 aa33.93■■■■□ 3.02
EPCAM-201ENST00000263735 RALGAPBQ86X10 1494 aa33.93■■■■□ 3.02
EPCAM-201ENST00000263735 RGL3Q3MIN7 710 aa33.92■■■■□ 3.02
EPCAM-201ENST00000263735 PRAG1Q86YV5 1406 aa33.89■■■■□ 3.02
EPCAM-201ENST00000263735 MADDQ8WXG6 1647 aa33.87■■■■□ 3.01
EPCAM-201ENST00000263735 PPLO60437 1756 aa33.87■■■■□ 3.01
EPCAM-201ENST00000263735 MLECQ14165 292 aa33.87■■■■□ 3.01
EPCAM-201ENST00000263735 ERVK-7P63135 1459 aa33.86■■■■□ 3.01
EPCAM-201ENST00000263735 KDM2AQ9Y2K7 1162 aa33.86■■■■□ 3.01
EPCAM-201ENST00000263735 ARID4BQ4LE39 1312 aaPredicted RBP33.86■■■■□ 3.01
EPCAM-201ENST00000263735 SPATA31D1Q6ZQQ2 1576 aa33.85■■■■□ 3.01
EPCAM-201ENST00000263735 MYO5BQ9ULV0 1848 aa33.85■■■■□ 3.01
EPCAM-201ENST00000263735 FER1L4A9Z1Z3 1794 aa33.85■■■■□ 3.01
EPCAM-201ENST00000263735 STAC3Q96MF2 364 aa33.84■■■■□ 3.01
EPCAM-201ENST00000263735 ZNF326Q5BKZ1 582 aaKnown RBP33.84■■■■□ 3.01
EPCAM-201ENST00000263735 LAMC1P11047 1609 aa33.82■■■■□ 3
EPCAM-201ENST00000263735 POLR1AO95602 1720 aaPredicted RBP33.8■■■■□ 3
EPCAM-201ENST00000263735 KIAA1210Q9ULL0 1709 aa33.8■■■■□ 3
EPCAM-201ENST00000263735 ESF1Q9H501 851 aaKnown RBP33.79■■■■□ 3
EPCAM-201ENST00000263735 MYOM2P54296 1465 aa33.79■■■■□ 3
EPCAM-201ENST00000263735 EIF4G2P78344 907 aaKnown RBP eCLIP33.77■■■■□ 3
EPCAM-201ENST00000263735 TMEM131LA2VDJ0 1609 aa33.76■■■■□ 3
EPCAM-201ENST00000263735 SLC52A1Q9NWF4 448 aa33.76■■■■□ 3
EPCAM-201ENST00000263735 DIEXFQ68CQ4 756 aaKnown RBP33.75■■■□□ 2.99
EPCAM-201ENST00000263735 ZMYM3Q14202 1370 aa33.73■■■□□ 2.99
EPCAM-201ENST00000263735 HSPA5P11021 654 aaKnown RBP33.7■■■□□ 2.99
EPCAM-201ENST00000263735 C3P01024 1663 aa33.7■■■□□ 2.99
EPCAM-201ENST00000263735 FBXO31Q5XUX0 539 aaPredicted RBP33.69■■■□□ 2.98
EPCAM-201ENST00000263735 ROCK2O75116 1388 aaKnown RBP33.69■■■□□ 2.98
EPCAM-201ENST00000263735 GPRASP1Q5JY77 1395 aa33.68■■■□□ 2.98
EPCAM-201ENST00000263735 NRXN1Q9ULB1 1477 aa33.67■■■□□ 2.98
EPCAM-201ENST00000263735 IDI1Q13907 227 aa33.67■■■□□ 2.98
EPCAM-201ENST00000263735 HIRIP3Q9BW71 556 aaPredicted RBP33.67■■■□□ 2.98
EPCAM-201ENST00000263735 NEXMIFQ5QGS0 1516 aa33.67■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms