RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 PKD2Q13563 968 aa36.21■■■■□ 3.39
HMG20B-201ENST00000262949 NCKAP5LQ9HCH0 1330 aa36.21■■■■□ 3.39
HMG20B-201ENST00000262949 FAM135AQ9P2D6 1515 aa36.21■■■■□ 3.39
HMG20B-201ENST00000262949 CEP170BQ9Y4F5 1589 aaPredicted RBP36.21■■■■□ 3.39
HMG20B-201ENST00000262949 KDM5DQ9BY66 1539 aa36.2■■■■□ 3.39
HMG20B-201ENST00000262949 ZNF142P52746 1687 aaPredicted RBP36.19■■■■□ 3.38
HMG20B-201ENST00000262949 PLA2R1Q13018 1463 aa36.17■■■■□ 3.38
HMG20B-201ENST00000262949 TNRQ92752 1358 aa36.15■■■■□ 3.38
HMG20B-201ENST00000262949 FBXO31Q5XUX0 539 aaPredicted RBP36.14■■■■□ 3.38
HMG20B-201ENST00000262949 A2ML1A8K2U0 1454 aa36.13■■■■□ 3.37
HMG20B-201ENST00000262949 MAST1Q9Y2H9 1570 aa36.13■■■■□ 3.37
HMG20B-201ENST00000262949 PZPP20742 1482 aa36.12■■■■□ 3.37
HMG20B-201ENST00000262949 LTBP4Q8N2S1 1624 aa36.07■■■■□ 3.36
HMG20B-201ENST00000262949 TCOF1Q13428 1488 aaKnown RBP36.06■■■■□ 3.36
HMG20B-201ENST00000262949 DNMT1P26358 1616 aaKnown RBP36.03■■■■□ 3.36
HMG20B-201ENST00000262949 IQSEC2Q5JU85 1478 aa36■■■■□ 3.35
HMG20B-201ENST00000262949 ZNF335Q9H4Z2 1342 aaPredicted RBP36■■■■□ 3.35
HMG20B-201ENST00000262949 RNF17Q9BXT8 1623 aaKnown RBP36■■■■□ 3.35
HMG20B-201ENST00000262949 EIF2AK4Q9P2K8 1649 aaKnown RBP35.99■■■■□ 3.35
HMG20B-201ENST00000262949 THEMISQ8N1K5 641 aaPredicted RBP35.99■■■■□ 3.35
HMG20B-201ENST00000262949 DUOX2Q9NRD8 1548 aa35.98■■■■□ 3.35
HMG20B-201ENST00000262949 NLRP1Q9C000 1473 aa35.97■■■■□ 3.35
HMG20B-201ENST00000262949 PTPN23Q9H3S7 1636 aa35.96■■■■□ 3.35
HMG20B-201ENST00000262949 ABCC3O15438 1527 aa35.94■■■■□ 3.34
HMG20B-201ENST00000262949 KIF15Q9NS87 1388 aa35.94■■■■□ 3.34
HMG20B-201ENST00000262949 ANKLE2Q86XL3 938 aa35.94■■■■□ 3.34
HMG20B-201ENST00000262949 ZC3H13Q5T200 1668 aaKnown RBP35.94■■■■□ 3.34
HMG20B-201ENST00000262949 SHANK2Q9UPX8 1470 aa35.93■■■■□ 3.34
HMG20B-201ENST00000262949 ABCC5O15440 1437 aa35.93■■■■□ 3.34
HMG20B-201ENST00000262949 RRP7BPQ9NSQ0 103 aa35.93■■■■□ 3.34
HMG20B-201ENST00000262949 FGD6Q6ZV73 1430 aa35.91■■■■□ 3.34
HMG20B-201ENST00000262949 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP35.89■■■■□ 3.341e-6■■□□□ 12.5
HMG20B-201ENST00000262949 UGGT1Q9NYU2 1555 aa35.89■■■■□ 3.34
HMG20B-201ENST00000262949 DAPK1P53355 1430 aa35.88■■■■□ 3.33
HMG20B-201ENST00000262949 ERBINQ96RT1 1412 aa35.86■■■■□ 3.33
HMG20B-201ENST00000262949 CROCC2H7BZ55 1655 aa35.84■■■■□ 3.33
HMG20B-201ENST00000262949 POLR1AO95602 1720 aaPredicted RBP35.83■■■■□ 3.33
HMG20B-201ENST00000262949 SPATA31D1Q6ZQQ2 1576 aa35.83■■■■□ 3.33
HMG20B-201ENST00000262949 MROH1Q8NDA8 1641 aa35.83■■■■□ 3.33
HMG20B-201ENST00000262949 GRWD1Q9BQ67 446 aaKnown RBP eCLIP35.82■■■■□ 3.327e-7■■□□□ 13.2
HMG20B-201ENST00000262949 ERVK-7P63135 1459 aa35.81■■■■□ 3.32
HMG20B-201ENST00000262949 ANKRD30AQ9BXX3 1397 aa35.81■■■■□ 3.32
HMG20B-201ENST00000262949 UBAP1LF5GYI3 381 aa35.81■■■■□ 3.32
HMG20B-201ENST00000262949 CHIC2Q9UKJ5 165 aa35.81■■■■□ 3.32
HMG20B-201ENST00000262949 KANK1Q14678 1352 aa35.79■■■■□ 3.32
HMG20B-201ENST00000262949 CEP152O94986 1710 aa35.78■■■■□ 3.32
HMG20B-201ENST00000262949 NEURL4Q96JN8 1562 aa35.77■■■■□ 3.32
HMG20B-201ENST00000262949 PRDM15P57071 1507 aaPredicted RBP35.75■■■■□ 3.31
HMG20B-201ENST00000262949 FAM50AQ14320 339 aaKnown RBP35.74■■■■□ 3.31
HMG20B-201ENST00000262949 NPHP4O75161 1426 aaPredicted RBP35.74■■■■□ 3.31
HMG20B-201ENST00000262949 ARHGAP31Q2M1Z3 1444 aa35.72■■■■□ 3.31
HMG20B-201ENST00000262949 DEPDC5O75140 1603 aa35.71■■■■□ 3.31
HMG20B-201ENST00000262949 CFAP65Q6ZU64 1925 aaKnown RBP35.71■■■■□ 3.31
HMG20B-201ENST00000262949 MED14O60244 1454 aa35.7■■■■□ 3.31
HMG20B-201ENST00000262949 CPS1P31327 1500 aa35.7■■■■□ 3.31
HMG20B-201ENST00000262949 DISP3Q9P2K9 1392 aa35.66■■■■□ 3.3
HMG20B-201ENST00000262949 TOM1O60784 492 aa35.61■■■■□ 3.29
HMG20B-201ENST00000262949 STAG3Q9UJ98 1225 aa35.61■■■■□ 3.29
HMG20B-201ENST00000262949 IQGAP1P46940 1657 aa35.61■■■■□ 3.29
HMG20B-201ENST00000262949 ADGRL2O95490 1459 aa35.59■■■■□ 3.29
HMG20B-201ENST00000262949 SCAF1Q9H7N4 1312 aaKnown RBP35.58■■■■□ 3.29
HMG20B-201ENST00000262949 UBR1Q8IWV7 1749 aa35.58■■■■□ 3.29
HMG20B-201ENST00000262949 EID1Q9Y6B2 187 aa35.58■■■■□ 3.29
HMG20B-201ENST00000262949 VWDEQ8N2E2 1590 aa35.57■■■■□ 3.28
HMG20B-201ENST00000262949 TXNDC2Q86VQ3 553 aa35.57■■■■□ 3.28
HMG20B-201ENST00000262949 SCAF11Q99590 1463 aaKnown RBP35.55■■■■□ 3.28
HMG20B-201ENST00000262949 LMTK2Q8IWU2 1503 aa35.55■■■■□ 3.28
HMG20B-201ENST00000262949 PIP4K2BP78356 416 aa35.52■■■■□ 3.28
HMG20B-201ENST00000262949 ANKRD50Q9ULJ7 1429 aa35.5■■■■□ 3.27
HMG20B-201ENST00000262949 SLIT1O75093 1534 aa35.49■■■■□ 3.27
HMG20B-201ENST00000262949 LTKP29376 864 aa35.49■■■■□ 3.27
HMG20B-201ENST00000262949 ARHGAP23Q9P227 1491 aa35.48■■■■□ 3.27
HMG20B-201ENST00000262949 IDI1Q13907 227 aa35.47■■■■□ 3.27
HMG20B-201ENST00000262949 TMEM2Q9UHN6 1383 aa35.45■■■■□ 3.27
HMG20B-201ENST00000262949 PIK3C2BO00750 1634 aa35.45■■■■□ 3.27
HMG20B-201ENST00000262949 EFCAB6Q5THR3 1501 aa35.42■■■■□ 3.26
HMG20B-201ENST00000262949 SLC52A1Q9NWF4 448 aa35.41■■■■□ 3.26
HMG20B-201ENST00000262949 NOS1P29475 1434 aa35.39■■■■□ 3.26
HMG20B-201ENST00000262949 LRRC7Q96NW7 1537 aa35.37■■■■□ 3.25
HMG20B-201ENST00000262949 HSPA1LP34931 641 aa35.37■■■■□ 3.25
HMG20B-201ENST00000262949 RPRD2Q5VT52 1461 aaKnown RBP35.36■■■■□ 3.25
HMG20B-201ENST00000262949 KDM5AP29375 1690 aaKnown RBP35.36■■■■□ 3.25
HMG20B-201ENST00000262949 SYNMO15061 1565 aa35.35■■■■□ 3.25
HMG20B-201ENST00000262949 ILDR2Q71H61 639 aa35.34■■■■□ 3.25
HMG20B-201ENST00000262949 ROCK1Q13464 1354 aa35.33■■■■□ 3.25
HMG20B-201ENST00000262949 STRCP1A6NGW2 1772 aa35.33■■■■□ 3.25
HMG20B-201ENST00000262949 ITGAEP38570 1179 aa35.31■■■■□ 3.24
HMG20B-201ENST00000262949 PPARGC1BQ86YN6 1023 aaKnown RBP35.29■■■■□ 3.24
HMG20B-201ENST00000262949 ADGRB3O60242 1522 aa35.28■■■■□ 3.24
HMG20B-201ENST00000262949 BCANQ96GW7 911 aa35.28■■■■□ 3.24
HMG20B-201ENST00000262949 TET3O43151 1660 aa35.27■■■■□ 3.24
HMG20B-201ENST00000262949 HDGFP51858 240 aaKnown RBP35.25■■■■□ 3.23
HMG20B-201ENST00000262949 UNC13BO14795 1591 aa35.22■■■■□ 3.23
HMG20B-201ENST00000262949 SLC26A8Q96RN1 970 aa35.22■■■■□ 3.23
HMG20B-201ENST00000262949 KCNA6P17658 529 aa35.2■■■■□ 3.23
HMG20B-201ENST00000262949 PPP1R15AO75807 674 aaPredicted RBP35.19■■■■□ 3.22
HMG20B-201ENST00000262949 GCC2Q8IWJ2 1684 aa35.18■■■■□ 3.22
HMG20B-201ENST00000262949 ALKQ9UM73 1620 aa35.18■■■■□ 3.22
HMG20B-201ENST00000262949 SOCS7O14512 581 aa35.18■■■■□ 3.22
HMG20B-201ENST00000262949 CHGAP10645 457 aaKnown RBP35.18■■■■□ 3.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms