RNA–Protein interactions for RNA: ENST00000262901.4

SIM1-201, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 3,999 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-201ENST00000262901 FGD1P98174 961 aa13.06□□□□□ -0.32
SIM1-201ENST00000262901 PREX2Q70Z35 1606 aa13.06□□□□□ -0.32
SIM1-201ENST00000262901 MAPKBP1O60336 1514 aa13.06□□□□□ -0.32
SIM1-201ENST00000262901 DNMT1P26358 1616 aaKnown RBP13.06□□□□□ -0.32
SIM1-201ENST00000262901 GGT6Q6P531 493 aa13.05□□□□□ -0.32
SIM1-201ENST00000262901 RTL5Q5HYW3 569 aaPredicted RBP13.05□□□□□ -0.32
SIM1-201ENST00000262901 SHANK2Q9UPX8 1470 aa13.05□□□□□ -0.32
SIM1-201ENST00000262901 PKD2Q13563 968 aa13.05□□□□□ -0.32
SIM1-201ENST00000262901 ERICH6BQ5W0A0 696 aa13.05□□□□□ -0.32
SIM1-201ENST00000262901 TRAPPC8Q9Y2L5 1435 aa13.04□□□□□ -0.32
SIM1-201ENST00000262901 CDC42BPAQ5VT25 1732 aa13.04□□□□□ -0.32
SIM1-201ENST00000262901 ARAP3Q8WWN8 1544 aa13.04□□□□□ -0.32
SIM1-201ENST00000262901 NEO1Q92859 1461 aa13.03□□□□□ -0.32
SIM1-201ENST00000262901 RTN4Q9NQC3 1192 aaKnown RBP13.03□□□□□ -0.32
SIM1-201ENST00000262901 FAM9BQ8IZU0 186 aa13.03□□□□□ -0.32
SIM1-201ENST00000262901 ZNF518AQ6AHZ1 1483 aa13.03□□□□□ -0.32
SIM1-201ENST00000262901 ABCA9Q8IUA7 1624 aa13.02□□□□□ -0.32
SIM1-201ENST00000262901 SAMD9LQ8IVG5 1584 aa13.02□□□□□ -0.33
SIM1-201ENST00000262901 IRX6P78412 446 aaPredicted RBP13.02□□□□□ -0.33
SIM1-201ENST00000262901 MBD5Q9P267 1494 aa13.01□□□□□ -0.33
SIM1-201ENST00000262901 ARHGEF5Q12774 1597 aa13.01□□□□□ -0.33
SIM1-201ENST00000262901 SIN3AQ96ST3 1273 aa13.01□□□□□ -0.33
SIM1-201ENST00000262901 CFAP74Q9C0B2 1584 aa13.01□□□□□ -0.33
SIM1-201ENST00000262901 FOXD1Q16676 465 aa12.99□□□□□ -0.33
SIM1-201ENST00000262901 ARXQ96QS3 562 aa12.99□□□□□ -0.33
SIM1-201ENST00000262901 MLECQ14165 292 aa12.99□□□□□ -0.33
SIM1-201ENST00000262901 ADGRL2O95490 1459 aa12.99□□□□□ -0.33
SIM1-201ENST00000262901 RTEL1-TNFRSF6BF6WH68 1400 aa12.99□□□□□ -0.33
SIM1-201ENST00000262901 ABCC1P33527 1531 aa12.98□□□□□ -0.33
SIM1-201ENST00000262901 ZMYND15Q9H091 742 aa12.98□□□□□ -0.33
SIM1-201ENST00000262901 WASHC2CQ9Y4E1 1318 aa12.98□□□□□ -0.33
SIM1-201ENST00000262901 MSH5O43196 834 aa12.97□□□□□ -0.33
SIM1-201ENST00000262901 SUPT16HQ9Y5B9 1047 aaKnown RBP12.97□□□□□ -0.33
SIM1-201ENST00000262901 CDC42BPBQ9Y5S2 1711 aa12.97□□□□□ -0.33
SIM1-201ENST00000262901 CHGAP10645 457 aaKnown RBP12.97□□□□□ -0.33
SIM1-201ENST00000262901 IL27Q8NEV9 243 aa12.97□□□□□ -0.33
SIM1-201ENST00000262901 POGZQ7Z3K3 1410 aa12.96□□□□□ -0.34
SIM1-201ENST00000262901 DHX29Q7Z478 1369 aaKnown RBP12.95□□□□□ -0.34
SIM1-201ENST00000262901 DUOX2Q9NRD8 1548 aa12.95□□□□□ -0.34
SIM1-201ENST00000262901 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
SIM1-201ENST00000262901 AAMPQ13685 434 aa12.94□□□□□ -0.34
SIM1-201ENST00000262901 STAG3Q9UJ98 1225 aa12.94□□□□□ -0.34
SIM1-201ENST00000262901 ARHGEF12Q9NZN5 1544 aa12.93□□□□□ -0.34
SIM1-201ENST00000262901 GLI2P10070 1586 aa12.93□□□□□ -0.34
SIM1-201ENST00000262901 ERBINQ96RT1 1412 aa12.93□□□□□ -0.34
SIM1-201ENST00000262901 ATP7AQ04656 1500 aa12.93□□□□□ -0.34
SIM1-201ENST00000262901 NPM2Q86SE8 214 aaKnown RBP12.92□□□□□ -0.34
SIM1-201ENST00000262901 ADGBQ8N7X0 1667 aa12.92□□□□□ -0.34
SIM1-201ENST00000262901 A2MP01023 1474 aa12.91□□□□□ -0.34
SIM1-201ENST00000262901 RBM10P98175 930 aaKnown RBP12.91□□□□□ -0.34
SIM1-201ENST00000262901 RGL3Q3MIN7 710 aa12.91□□□□□ -0.34
SIM1-201ENST00000262901 DIP2BQ9P265 1576 aa12.91□□□□□ -0.34
SIM1-201ENST00000262901 TSPOAP1O95153 1857 aa12.9□□□□□ -0.34
SIM1-201ENST00000262901 KDM2AQ9Y2K7 1162 aa12.89□□□□□ -0.35
SIM1-201ENST00000262901 GCC2Q8IWJ2 1684 aa12.89□□□□□ -0.35
SIM1-201ENST00000262901 CCDC144AA2RUR9 1427 aa12.88□□□□□ -0.35
SIM1-201ENST00000262901 MLH3Q9UHC1 1453 aa12.88□□□□□ -0.35
SIM1-201ENST00000262901 MRS2Q9HD23 443 aa12.88□□□□□ -0.35
SIM1-201ENST00000262901 MAST1Q9Y2H9 1570 aa12.87□□□□□ -0.35
SIM1-201ENST00000262901 DHX37Q8IY37 1157 aaKnown RBP12.87□□□□□ -0.35
SIM1-201ENST00000262901 CROCC2H7BZ55 1655 aa12.85□□□□□ -0.35
SIM1-201ENST00000262901 ZFYVE16Q7Z3T8 1539 aa12.85□□□□□ -0.35
SIM1-201ENST00000262901 VSIG10Q8N0Z9 540 aa12.85□□□□□ -0.35
SIM1-201ENST00000262901 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
SIM1-201ENST00000262901 MAGI2Q86UL8 1455 aa12.84□□□□□ -0.35
SIM1-201ENST00000262901 PLXNC1O60486 1568 aa12.83□□□□□ -0.35
SIM1-201ENST00000262901 DCAF11Q8TEB1 546 aa12.83□□□□□ -0.36
SIM1-201ENST00000262901 L3MBTL2Q969R5 705 aa12.83□□□□□ -0.36
SIM1-201ENST00000262901 HECW2Q9P2P5 1572 aa12.83□□□□□ -0.36
SIM1-201ENST00000262901 ATP10AO60312 1499 aa12.83□□□□□ -0.36
SIM1-201ENST00000262901 MAP3K4Q9Y6R4 1608 aa12.83□□□□□ -0.36
SIM1-201ENST00000262901 PPP1R15AO75807 674 aaPredicted RBP12.82□□□□□ -0.36
SIM1-201ENST00000262901 ANP32AP39687 249 aaKnown RBP12.82□□□□□ -0.36
SIM1-201ENST00000262901 PPP6R1Q9UPN7 881 aa12.82□□□□□ -0.36
SIM1-201ENST00000262901 ANKRD30BQ9BXX2 1392 aa12.82□□□□□ -0.36
SIM1-201ENST00000262901 YEATS2Q9ULM3 1422 aa12.81□□□□□ -0.36
SIM1-201ENST00000262901 TULP1O00294 542 aaPredicted RBP12.81□□□□□ -0.36
SIM1-201ENST00000262901 FAM135AQ9P2D6 1515 aa12.8□□□□□ -0.36
SIM1-201ENST00000262901 TMC1Q8TDI8 760 aa12.8□□□□□ -0.36
SIM1-201ENST00000262901 TAF7LQ5H9L4 462 aa12.8□□□□□ -0.36
SIM1-201ENST00000262901 PAXIP1Q6ZW49 1069 aaPredicted RBP12.79□□□□□ -0.36
SIM1-201ENST00000262901 KDM6BO15054 1643 aa12.79□□□□□ -0.36
SIM1-201ENST00000262901 PZPP20742 1482 aa12.79□□□□□ -0.36
SIM1-201ENST00000262901 EIF4G2P78344 907 aaKnown RBP eCLIP12.79□□□□□ -0.36
SIM1-201ENST00000262901 NBR1Q14596 966 aa12.79□□□□□ -0.36
SIM1-201ENST00000262901 CANXP27824 592 aaKnown RBP12.77□□□□□ -0.37
SIM1-201ENST00000262901 INO80Q9ULG1 1556 aaPredicted RBP12.76□□□□□ -0.37
SIM1-201ENST00000262901 KDM5CP41229 1560 aa12.76□□□□□ -0.37
SIM1-201ENST00000262901 HDGFP51858 240 aaKnown RBP12.75□□□□□ -0.37
SIM1-201ENST00000262901 CHMP4AQ9BY43 222 aa12.75□□□□□ -0.37
SIM1-201ENST00000262901 CARD11Q9BXL7 1154 aa12.74□□□□□ -0.37
SIM1-201ENST00000262901 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
SIM1-201ENST00000262901 STAC3Q96MF2 364 aa12.73□□□□□ -0.37
SIM1-201ENST00000262901 RPRD2Q5VT52 1461 aaKnown RBP12.73□□□□□ -0.37
SIM1-201ENST00000262901 KDM5DQ9BY66 1539 aa12.72□□□□□ -0.37
SIM1-201ENST00000262901 KIDINS220Q9ULH0 1771 aa12.71□□□□□ -0.37
SIM1-201ENST00000262901 DIP2CQ9Y2E4 1556 aa12.7□□□□□ -0.38
SIM1-201ENST00000262901 ZMYM4Q5VZL5 1548 aa12.7□□□□□ -0.38
SIM1-201ENST00000262901 EIF2AK4Q9P2K8 1649 aaKnown RBP12.69□□□□□ -0.38
SIM1-201ENST00000262901 COL17A1Q9UMD9 1497 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms