RNA–Protein interactions for RNA: ENST00000262768.11

TIMP2-201, Transcript of TIMP metallopeptidase inhibitor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP2, Length 3,652 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP2-201ENST00000262768 CFAP70Q5T0N1 1121 aa20.23■□□□□ 0.83
TIMP2-201ENST00000262768 LRRIQ1Q96JM4 1722 aa20.22■□□□□ 0.83
TIMP2-201ENST00000262768 CNTLNQ9NXG0 1405 aa20.22■□□□□ 0.83
TIMP2-201ENST00000262768 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
TIMP2-201ENST00000262768 PPM1GO15355 546 aaPredicted RBP20.19■□□□□ 0.82
TIMP2-201ENST00000262768 CCDC141Q6ZP82 1450 aa20.19■□□□□ 0.82
TIMP2-201ENST00000262768 NPM2Q86SE8 214 aaKnown RBP20.19■□□□□ 0.82
TIMP2-201ENST00000262768 FAM69CQ0P6D2 419 aa20.18■□□□□ 0.82
TIMP2-201ENST00000262768 CCDC146Q8IYE0 955 aa20.17■□□□□ 0.82
TIMP2-201ENST00000262768 ERCC6L2Q5T890 1561 aa20.16■□□□□ 0.82
TIMP2-201ENST00000262768 SYCP2Q9BX26 1530 aa20.15■□□□□ 0.82
TIMP2-201ENST00000262768 CANXP27824 592 aaKnown RBP20.14■□□□□ 0.82
TIMP2-201ENST00000262768 TSHZ2Q9NRE2 1034 aa20.14■□□□□ 0.82
TIMP2-201ENST00000262768 KTN1Q86UP2 1357 aaKnown RBP20.14■□□□□ 0.81
TIMP2-201ENST00000262768 PZPP20742 1482 aa20.13■□□□□ 0.81
TIMP2-201ENST00000262768 TRAPPC8Q9Y2L5 1435 aa20.12■□□□□ 0.81
TIMP2-201ENST00000262768 POGKQ9P215 609 aa20.12■□□□□ 0.81
TIMP2-201ENST00000262768 SRPK2P78362 688 aaKnown RBP20.12■□□□□ 0.81
TIMP2-201ENST00000262768 TRHP20396 242 aaPredicted RBP20.09■□□□□ 0.81
TIMP2-201ENST00000262768 PLIN1O60240 522 aa20.08■□□□□ 0.81
TIMP2-201ENST00000262768 CDCA8Q53HL2 280 aa20.08■□□□□ 0.81
TIMP2-201ENST00000262768 NUTM2FA1L443 756 aa20.08■□□□□ 0.8
TIMP2-201ENST00000262768 NLRP13Q86W25 1043 aa20.07■□□□□ 0.8
TIMP2-201ENST00000262768 DNMT1P26358 1616 aaKnown RBP20.07■□□□□ 0.8
TIMP2-201ENST00000262768 DENND4BO75064 1496 aaPredicted RBP20.07■□□□□ 0.8
TIMP2-201ENST00000262768 SOX12O15370 315 aa20.06■□□□□ 0.8
TIMP2-201ENST00000262768 RALBP1Q15311 655 aa20.06■□□□□ 0.8
TIMP2-201ENST00000262768 MYBBP1AQ9BQG0 1328 aaKnown RBP20.05■□□□□ 0.8
TIMP2-201ENST00000262768 CDCA7LQ96GN5 454 aa20.05■□□□□ 0.8
TIMP2-201ENST00000262768 PPP4R2Q9NY27 417 aa20.04■□□□□ 0.8
TIMP2-201ENST00000262768 SLC24A1O60721 1099 aa20.02■□□□□ 0.8
TIMP2-201ENST00000262768 RRP7AQ9Y3A4 280 aaKnown RBP20.02■□□□□ 0.8
TIMP2-201ENST00000262768 U2SURPO15042 1029 aaKnown RBP20.01■□□□□ 0.79
TIMP2-201ENST00000262768 MORC1Q86VD1 984 aa20.01■□□□□ 0.79
TIMP2-201ENST00000262768 RBM19Q9Y4C8 960 aaKnown RBP20■□□□□ 0.79
TIMP2-201ENST00000262768 NUDCQ9Y266 331 aa20■□□□□ 0.79
TIMP2-201ENST00000262768 ZBED9Q6R2W3 1325 aa20■□□□□ 0.79
TIMP2-201ENST00000262768 ADGRF5Q8IZF2 1346 aa20■□□□□ 0.79
TIMP2-201ENST00000262768 FANCAO15360 1455 aa19.99■□□□□ 0.79
TIMP2-201ENST00000262768 MINK1Q8N4C8 1332 aaPredicted RBP19.99■□□□□ 0.79
TIMP2-201ENST00000262768 PLCH2O75038 1416 aa19.98■□□□□ 0.79
TIMP2-201ENST00000262768 PNISRQ8TF01 805 aaKnown RBP19.98■□□□□ 0.79
TIMP2-201ENST00000262768 ADGRL1O94910 1474 aa19.98■□□□□ 0.79
TIMP2-201ENST00000262768 ABCC10Q5T3U5 1492 aa19.98■□□□□ 0.79
TIMP2-201ENST00000262768 ITSN2Q9NZM3 1697 aa19.97■□□□□ 0.79
TIMP2-201ENST00000262768 SLC12A5Q9H2X9 1139 aa19.97■□□□□ 0.79
TIMP2-201ENST00000262768 CHD1O14646 1710 aa19.97■□□□□ 0.79
TIMP2-201ENST00000262768 ABCA8O94911 1581 aa19.96■□□□□ 0.79
TIMP2-201ENST00000262768 CD109Q6YHK3 1445 aa19.96■□□□□ 0.79
TIMP2-201ENST00000262768 ASXL2Q76L83 1435 aa19.96■□□□□ 0.79
TIMP2-201ENST00000262768 RCAN3Q9UKA8 241 aa19.96■□□□□ 0.79
TIMP2-201ENST00000262768 TEX14Q8IWB6 1497 aa19.96■□□□□ 0.79
TIMP2-201ENST00000262768 FRAT1Q92837 279 aaPredicted RBP19.96■□□□□ 0.79
TIMP2-201ENST00000262768 ADAMTS8Q9UP79 889 aa19.96■□□□□ 0.79
TIMP2-201ENST00000262768 MBD5Q9P267 1494 aa19.95■□□□□ 0.78
TIMP2-201ENST00000262768 CABP2Q9NPB3 220 aa19.95■□□□□ 0.78
TIMP2-201ENST00000262768 DISP3Q9P2K9 1392 aa19.94■□□□□ 0.78
TIMP2-201ENST00000262768 FAM135AQ9P2D6 1515 aa19.94■□□□□ 0.78
TIMP2-201ENST00000262768 FBXO31Q5XUX0 539 aaPredicted RBP19.93■□□□□ 0.78
TIMP2-201ENST00000262768 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.92■□□□□ 0.78
TIMP2-201ENST00000262768 ABCC2Q92887 1545 aa19.91■□□□□ 0.78
TIMP2-201ENST00000262768 APAF1O14727 1248 aa19.91■□□□□ 0.78
TIMP2-201ENST00000262768 LAS1LQ9Y4W2 734 aaKnown RBP19.91■□□□□ 0.78
TIMP2-201ENST00000262768 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.9■□□□□ 0.78
TIMP2-201ENST00000262768 GCC2Q8IWJ2 1684 aa19.89■□□□□ 0.78
TIMP2-201ENST00000262768 EXOC6Q8TAG9 804 aa19.89■□□□□ 0.78
TIMP2-201ENST00000262768 U2AF1L5P0DN76 240 aaPredicted RBP19.89■□□□□ 0.77
TIMP2-201ENST00000262768 U2AF1Q01081 240 aaKnown RBP eCLIP19.89■□□□□ 0.77
TIMP2-201ENST00000262768 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
TIMP2-201ENST00000262768 CFAP65Q6ZU64 1925 aaKnown RBP19.88■□□□□ 0.77
TIMP2-201ENST00000262768 TTC37Q6PGP7 1564 aa19.88■□□□□ 0.77
TIMP2-201ENST00000262768 CENPJQ9HC77 1338 aaPredicted RBP19.87■□□□□ 0.77
TIMP2-201ENST00000262768 ZBTB7CA1YPR0 619 aa19.87■□□□□ 0.77
TIMP2-201ENST00000262768 C14orf37Q86TY3 774 aa19.87■□□□□ 0.77
TIMP2-201ENST00000262768 NEFMP07197 916 aa19.86■□□□□ 0.77
TIMP2-201ENST00000262768 BCL2L13Q9BXK5 485 aa19.86■□□□□ 0.77
TIMP2-201ENST00000262768 RGS3P49796 1198 aa19.85■□□□□ 0.77
TIMP2-201ENST00000262768 DAXXQ9UER7 740 aaPredicted RBP19.85■□□□□ 0.77
TIMP2-201ENST00000262768 ADGRL2O95490 1459 aa19.85■□□□□ 0.77
TIMP2-201ENST00000262768 VGFO15240 615 aaPredicted RBP19.85■□□□□ 0.77
TIMP2-201ENST00000262768 SAMD9LQ8IVG5 1584 aa19.85■□□□□ 0.77
TIMP2-201ENST00000262768 ARHGEF12Q9NZN5 1544 aa19.85■□□□□ 0.77
TIMP2-201ENST00000262768 EIF3AQ14152 1382 aaKnown RBP19.84■□□□□ 0.77
TIMP2-201ENST00000262768 TESK2Q96S53 571 aa19.84■□□□□ 0.77
TIMP2-201ENST00000262768 PPP2R1AP30153 589 aa19.84■□□□□ 0.77
TIMP2-201ENST00000262768 IDI1Q13907 227 aa19.84■□□□□ 0.77
TIMP2-201ENST00000262768 NBR1Q14596 966 aa19.84■□□□□ 0.77
TIMP2-201ENST00000262768 GGNBP2Q9H3C7 697 aa19.84■□□□□ 0.77
TIMP2-201ENST00000262768 WDR7Q9Y4E6 1490 aa19.83■□□□□ 0.77
TIMP2-201ENST00000262768 CFAP53Q96M91 514 aa19.83■□□□□ 0.77
TIMP2-201ENST00000262768 CDC42BPAQ5VT25 1732 aa19.81■□□□□ 0.76
TIMP2-201ENST00000262768 PRAG1Q86YV5 1406 aa19.81■□□□□ 0.76
TIMP2-201ENST00000262768 CLUAP1Q96AJ1 413 aa19.8■□□□□ 0.76
TIMP2-201ENST00000262768 SKAP1Q86WV1 359 aa19.8■□□□□ 0.76
TIMP2-201ENST00000262768 DHX29Q7Z478 1369 aaKnown RBP19.79■□□□□ 0.76
TIMP2-201ENST00000262768 ANP32AP39687 249 aaKnown RBP19.79■□□□□ 0.76
TIMP2-201ENST00000262768 SPATA31E1Q6ZUB1 1445 aa19.78■□□□□ 0.76
TIMP2-201ENST00000262768 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
TIMP2-201ENST00000262768 SHANK2Q9UPX8 1470 aa19.77■□□□□ 0.76
TIMP2-201ENST00000262768 GOLGA2Q08379 1002 aa19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms