RNA–Protein interactions for RNA: ENST00000262675.11

TTC39A-201, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TTC39A, Length 2,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-201ENST00000262675 KDM5DQ9BY66 1539 aa14.68□□□□□ -0.06
TTC39A-201ENST00000262675 ARHGEF5Q12774 1597 aa14.67□□□□□ -0.06
TTC39A-201ENST00000262675 SPATA31D1Q6ZQQ2 1576 aa14.67□□□□□ -0.06
TTC39A-201ENST00000262675 NCKAP5LQ9HCH0 1330 aa14.67□□□□□ -0.06
TTC39A-201ENST00000262675 PZPP20742 1482 aa14.66□□□□□ -0.06
TTC39A-201ENST00000262675 CAMSAP2Q08AD1 1489 aa14.66□□□□□ -0.06
TTC39A-201ENST00000262675 NCOA2Q15596 1464 aa14.66□□□□□ -0.06
TTC39A-201ENST00000262675 DNMT1P26358 1616 aaKnown RBP14.66□□□□□ -0.06
TTC39A-201ENST00000262675 ZNF644Q9H582 1327 aaPredicted RBP14.66□□□□□ -0.06
TTC39A-201ENST00000262675 POLR1AO95602 1720 aaPredicted RBP14.65□□□□□ -0.06
TTC39A-201ENST00000262675 TNRQ92752 1358 aa14.64□□□□□ -0.07
TTC39A-201ENST00000262675 TSPY4P0CV99 314 aa14.63□□□□□ -0.07
TTC39A-201ENST00000262675 TSPY10P0CW01 314 aa14.63□□□□□ -0.07
TTC39A-201ENST00000262675 CPS1P31327 1500 aa14.63□□□□□ -0.07
TTC39A-201ENST00000262675 NLRP1Q9C000 1473 aa14.63□□□□□ -0.07
TTC39A-201ENST00000262675 KIF3BO15066 747 aa14.63□□□□□ -0.07
TTC39A-201ENST00000262675 ZNF335Q9H4Z2 1342 aaPredicted RBP14.62□□□□□ -0.07
TTC39A-201ENST00000262675 ZC3H13Q5T200 1668 aaKnown RBP14.62□□□□□ -0.07
TTC39A-201ENST00000262675 SOCS7O14512 581 aa14.61□□□□□ -0.07
TTC39A-201ENST00000262675 WASHC2CQ9Y4E1 1318 aa14.61□□□□□ -0.07
TTC39A-201ENST00000262675 UBAP1LF5GYI3 381 aa14.61□□□□□ -0.07
TTC39A-201ENST00000262675 MAST1Q9Y2H9 1570 aa14.61□□□□□ -0.07
TTC39A-201ENST00000262675 EIF2AK4Q9P2K8 1649 aaKnown RBP14.6□□□□□ -0.07
TTC39A-201ENST00000262675 THEMISQ8N1K5 641 aaPredicted RBP14.6□□□□□ -0.07
TTC39A-201ENST00000262675 MAP3K1Q13233 1512 aa14.6□□□□□ -0.07
TTC39A-201ENST00000262675 RNF17Q9BXT8 1623 aaKnown RBP14.59□□□□□ -0.07
TTC39A-201ENST00000262675 DEPDC5O75140 1603 aa14.59□□□□□ -0.07
TTC39A-201ENST00000262675 ANKLE2Q86XL3 938 aa14.58□□□□□ -0.07
TTC39A-201ENST00000262675 MIA2Q96PC5 1412 aa14.58□□□□□ -0.08
TTC39A-201ENST00000262675 LRRC9Q6ZRR7 1453 aa14.57□□□□□ -0.08
TTC39A-201ENST00000262675 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
TTC39A-201ENST00000262675 NEURL4Q96JN8 1562 aa14.57□□□□□ -0.08
TTC39A-201ENST00000262675 UGGT1Q9NYU2 1555 aa14.56□□□□□ -0.08
TTC39A-201ENST00000262675 MED14O60244 1454 aa14.56□□□□□ -0.08
TTC39A-201ENST00000262675 SHANK2Q9UPX8 1470 aa14.56□□□□□ -0.08
TTC39A-201ENST00000262675 TOM1O60784 492 aa14.55□□□□□ -0.08
TTC39A-201ENST00000262675 ILDR2Q71H61 639 aa14.55□□□□□ -0.08
TTC39A-201ENST00000262675 FBXO31Q5XUX0 539 aaPredicted RBP14.54□□□□□ -0.08
TTC39A-201ENST00000262675 ABCC3O15438 1527 aa14.53□□□□□ -0.08
TTC39A-201ENST00000262675 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.08
TTC39A-201ENST00000262675 MYOM3Q5VTT5 1437 aa14.52□□□□□ -0.08
TTC39A-201ENST00000262675 DUOX2Q9NRD8 1548 aa14.52□□□□□ -0.09
TTC39A-201ENST00000262675 IQGAP1P46940 1657 aa14.52□□□□□ -0.09
TTC39A-201ENST00000262675 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.51□□□□□ -0.09
TTC39A-201ENST00000262675 VWDEQ8N2E2 1590 aa14.51□□□□□ -0.09
TTC39A-201ENST00000262675 ERVK-7P63135 1459 aa14.49□□□□□ -0.09
TTC39A-201ENST00000262675 SYNMO15061 1565 aa14.49□□□□□ -0.09
TTC39A-201ENST00000262675 ARHGAP31Q2M1Z3 1444 aa14.47□□□□□ -0.09
TTC39A-201ENST00000262675 ERBINQ96RT1 1412 aa14.47□□□□□ -0.09
TTC39A-201ENST00000262675 MROH1Q8NDA8 1641 aa14.47□□□□□ -0.09
TTC39A-201ENST00000262675 CEP152O94986 1710 aa14.45□□□□□ -0.1
TTC39A-201ENST00000262675 PRDM15P57071 1507 aaPredicted RBP14.45□□□□□ -0.1
TTC39A-201ENST00000262675 CROCC2H7BZ55 1655 aa14.45□□□□□ -0.1
TTC39A-201ENST00000262675 UBR1Q8IWV7 1749 aa14.45□□□□□ -0.1
TTC39A-201ENST00000262675 SCAF1Q9H7N4 1312 aaKnown RBP14.45□□□□□ -0.1
TTC39A-201ENST00000262675 SLIT1O75093 1534 aa14.43□□□□□ -0.1
TTC39A-201ENST00000262675 HSPA1LP34931 641 aa14.43□□□□□ -0.1
TTC39A-201ENST00000262675 PIP4K2BP78356 416 aa14.43□□□□□ -0.1
TTC39A-201ENST00000262675 APLP2Q06481 763 aa14.43□□□□□ -0.1
TTC39A-201ENST00000262675 SCAF11Q99590 1463 aaKnown RBP14.43□□□□□ -0.1
TTC39A-201ENST00000262675 MED1Q15648 1581 aaPredicted RBP14.43□□□□□ -0.1
TTC39A-201ENST00000262675 KDM5AP29375 1690 aaKnown RBP14.43□□□□□ -0.1
TTC39A-201ENST00000262675 KANK1Q14678 1352 aa14.42□□□□□ -0.1
TTC39A-201ENST00000262675 KIF15Q9NS87 1388 aa14.42□□□□□ -0.1
TTC39A-201ENST00000262675 ARHGAP23Q9P227 1491 aa14.42□□□□□ -0.1
TTC39A-201ENST00000262675 PTPN23Q9H3S7 1636 aa14.41□□□□□ -0.1
TTC39A-201ENST00000262675 KANK4Q5T7N3 995 aaPredicted RBP14.41□□□□□ -0.1
TTC39A-201ENST00000262675 LRRC7Q96NW7 1537 aa14.4□□□□□ -0.1
TTC39A-201ENST00000262675 EID1Q9Y6B2 187 aa14.4□□□□□ -0.1
TTC39A-201ENST00000262675 ABCC5O15440 1437 aa14.39□□□□□ -0.11
TTC39A-201ENST00000262675 CFAP65Q6ZU64 1925 aaKnown RBP14.39□□□□□ -0.11
TTC39A-201ENST00000262675 STRCP1A6NGW2 1772 aa14.38□□□□□ -0.11
TTC39A-201ENST00000262675 LMTK2Q8IWU2 1503 aa14.38□□□□□ -0.11
TTC39A-201ENST00000262675 ANKRD30AQ9BXX3 1397 aa14.37□□□□□ -0.11
TTC39A-201ENST00000262675 DAPK1P53355 1430 aa14.37□□□□□ -0.11
TTC39A-201ENST00000262675 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
TTC39A-201ENST00000262675 CCER1Q8TC90 406 aaPredicted RBP14.37□□□□□ -0.11
TTC39A-201ENST00000262675 TXNDC2Q86VQ3 553 aa14.36□□□□□ -0.11
TTC39A-201ENST00000262675 FGD6Q6ZV73 1430 aa14.35□□□□□ -0.11
TTC39A-201ENST00000262675 PIK3C2BO00750 1634 aa14.35□□□□□ -0.11
TTC39A-201ENST00000262675 RRP7BPQ9NSQ0 103 aa14.34□□□□□ -0.11
TTC39A-201ENST00000262675 TMEM2Q9UHN6 1383 aa14.34□□□□□ -0.11
TTC39A-201ENST00000262675 PHF23Q9BUL5 403 aaPredicted RBP14.34□□□□□ -0.11
TTC39A-201ENST00000262675 EFCAB6Q5THR3 1501 aa14.34□□□□□ -0.11
TTC39A-201ENST00000262675 STAG3Q9UJ98 1225 aa14.33□□□□□ -0.11
TTC39A-201ENST00000262675 LTKP29376 864 aa14.32□□□□□ -0.12
TTC39A-201ENST00000262675 ADGRL2O95490 1459 aa14.3□□□□□ -0.12
TTC39A-201ENST00000262675 RPRD2Q5VT52 1461 aaKnown RBP14.3□□□□□ -0.12
TTC39A-201ENST00000262675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.3□□□□□ -0.12
TTC39A-201ENST00000262675 SLC52A1Q9NWF4 448 aa14.3□□□□□ -0.12
TTC39A-201ENST00000262675 XIRP1Q702N8 1843 aaKnown RBP14.29□□□□□ -0.12
TTC39A-201ENST00000262675 ADGRB3O60242 1522 aa14.29□□□□□ -0.12
TTC39A-201ENST00000262675 NOS1P29475 1434 aa14.29□□□□□ -0.12
TTC39A-201ENST00000262675 FAM135BQ49AJ0 1406 aa14.28□□□□□ -0.12
TTC39A-201ENST00000262675 NKTRP30414 1462 aaKnown RBP14.27□□□□□ -0.12
TTC39A-201ENST00000262675 KCNA6P17658 529 aa14.27□□□□□ -0.12
TTC39A-201ENST00000262675 HDGFP51858 240 aaKnown RBP14.27□□□□□ -0.12
TTC39A-201ENST00000262675 IDI1Q13907 227 aa14.26□□□□□ -0.13
TTC39A-201ENST00000262675 TET3O43151 1660 aa14.26□□□□□ -0.13
TTC39A-201ENST00000262675 NWD1Q149M9 1564 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms