RNA–Protein interactions for RNA: ENST00000262650.10

ITCH-201, Transcript of itchy E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene ITCH, Length 3,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITCH-201ENST00000262650 CNTLNQ9NXG0 1405 aa8.31□□□□□ -1.08
ITCH-201ENST00000262650 GPATCH8Q9UKJ3 1502 aaKnown RBP8.31□□□□□ -1.08
ITCH-201ENST00000262650 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.31□□□□□ -1.08
ITCH-201ENST00000262650 FKBP8Q14318 412 aa8.31□□□□□ -1.08
ITCH-201ENST00000262650 HNRNPUL2Q1KMD3 747 aaKnown RBP8.31□□□□□ -1.08
ITCH-201ENST00000262650 NPATQ14207 1427 aa8.31□□□□□ -1.08
ITCH-201ENST00000262650 PTPRTO14522 1441 aa8.3□□□□□ -1.08
ITCH-201ENST00000262650 TRAPPC8Q9Y2L5 1435 aa8.3□□□□□ -1.08
ITCH-201ENST00000262650 TIAM1Q13009 1591 aa8.29□□□□□ -1.08
ITCH-201ENST00000262650 ATP7AQ04656 1500 aa8.29□□□□□ -1.08
ITCH-201ENST00000262650 EHBP1L1Q8N3D4 1523 aa8.28□□□□□ -1.08
ITCH-201ENST00000262650 SYCP2Q9BX26 1530 aa8.27□□□□□ -1.08
ITCH-201ENST00000262650 ARID4BQ4LE39 1312 aaPredicted RBP8.27□□□□□ -1.09
ITCH-201ENST00000262650 LTBP4Q8N2S1 1624 aa8.27□□□□□ -1.09
ITCH-201ENST00000262650 RTEL1-TNFRSF6BF6WH68 1400 aa8.27□□□□□ -1.09
ITCH-201ENST00000262650 SUPT6HQ7KZ85 1726 aaKnown RBP8.27□□□□□ -1.09
ITCH-201ENST00000262650 MYO3AQ8NEV4 1616 aa8.26□□□□□ -1.09
ITCH-201ENST00000262650 CEP162Q5TB80 1403 aa8.26□□□□□ -1.09
ITCH-201ENST00000262650 CLTCQ00610 1675 aaKnown RBP8.26□□□□□ -1.09
ITCH-201ENST00000262650 ARHGEF5Q12774 1597 aa8.26□□□□□ -1.09
ITCH-201ENST00000262650 PUS7Q96PZ0 661 aaKnown RBP8.26□□□□□ -1.09
ITCH-201ENST00000262650 CCDC9Q9Y3X0 531 aaKnown RBP8.26□□□□□ -1.09
ITCH-201ENST00000262650 UHRF1BP1Q6BDS2 1440 aa8.25□□□□□ -1.09
ITCH-201ENST00000262650 MBD5Q9P267 1494 aa8.25□□□□□ -1.09
ITCH-201ENST00000262650 MAST1Q9Y2H9 1570 aa8.25□□□□□ -1.09
ITCH-201ENST00000262650 CENPBP07199 599 aaPredicted RBP8.25□□□□□ -1.09
ITCH-201ENST00000262650 PLA2R1Q13018 1463 aa8.25□□□□□ -1.09
ITCH-201ENST00000262650 NCOA1Q15788 1441 aa8.25□□□□□ -1.09
ITCH-201ENST00000262650 MAP3K1Q13233 1512 aa8.24□□□□□ -1.09
ITCH-201ENST00000262650 AFAP1Q8N556 730 aa8.24□□□□□ -1.09
ITCH-201ENST00000262650 PCGF6Q9BYE7 350 aa8.23□□□□□ -1.09
ITCH-201ENST00000262650 RNF17Q9BXT8 1623 aaKnown RBP8.23□□□□□ -1.09
ITCH-201ENST00000262650 RSPH4AQ5TD94 716 aa8.23□□□□□ -1.09
ITCH-201ENST00000262650 A2MP01023 1474 aa8.23□□□□□ -1.09
ITCH-201ENST00000262650 POLR1AO95602 1720 aaPredicted RBP8.23□□□□□ -1.09
ITCH-201ENST00000262650 ANO8Q9HCE9 1232 aaPredicted RBP8.22□□□□□ -1.09
ITCH-201ENST00000262650 BCCIPQ9P287 314 aaKnown RBP eCLIP8.22□□□□□ -1.09
ITCH-201ENST00000262650 DMRT2Q9Y5R5 561 aa8.22□□□□□ -1.09
ITCH-201ENST00000262650 ZC3H13Q5T200 1668 aaKnown RBP8.22□□□□□ -1.09
ITCH-201ENST00000262650 PTPRKQ15262 1439 aa8.22□□□□□ -1.09
ITCH-201ENST00000262650 EIF2AK4Q9P2K8 1649 aaKnown RBP8.22□□□□□ -1.09
ITCH-201ENST00000262650 TCOF1Q13428 1488 aaKnown RBP8.22□□□□□ -1.09
ITCH-201ENST00000262650 CERKQ8TCT0 537 aa8.21□□□□□ -1.09
ITCH-201ENST00000262650 CEP170BQ9Y4F5 1589 aaPredicted RBP8.21□□□□□ -1.09
ITCH-201ENST00000262650 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.21□□□□□ -1.1
ITCH-201ENST00000262650 CAMSAP1Q5T5Y3 1602 aa8.2□□□□□ -1.1
ITCH-201ENST00000262650 DEPDC5O75140 1603 aa8.2□□□□□ -1.1
ITCH-201ENST00000262650 DNMT1P26358 1616 aaKnown RBP8.2□□□□□ -1.1
ITCH-201ENST00000262650 KDM5DQ9BY66 1539 aa8.19□□□□□ -1.1
ITCH-201ENST00000262650 HSPA2P54652 639 aa8.19□□□□□ -1.1
ITCH-201ENST00000262650 CCNB3Q8WWL7 1395 aa8.19□□□□□ -1.1
ITCH-201ENST00000262650 ZMYM3Q14202 1370 aa8.18□□□□□ -1.1
ITCH-201ENST00000262650 CROCC2H7BZ55 1655 aa8.18□□□□□ -1.1
ITCH-201ENST00000262650 A2ML1A8K2U0 1454 aa8.18□□□□□ -1.1
ITCH-201ENST00000262650 CFAP44Q96MT7 982 aa8.18□□□□□ -1.1
ITCH-201ENST00000262650 CCDC141Q6ZP82 1450 aa8.18□□□□□ -1.1
ITCH-201ENST00000262650 SPAG9O60271 1321 aaKnown RBP8.18□□□□□ -1.1
ITCH-201ENST00000262650 SCAF1Q9H7N4 1312 aaKnown RBP8.18□□□□□ -1.1
ITCH-201ENST00000262650 DHX29Q7Z478 1369 aaKnown RBP8.17□□□□□ -1.1
ITCH-201ENST00000262650 NEURL4Q96JN8 1562 aa8.17□□□□□ -1.1
ITCH-201ENST00000262650 PZPP20742 1482 aa8.17□□□□□ -1.1
ITCH-201ENST00000262650 ZEB1P37275 1124 aaPredicted RBP8.17□□□□□ -1.1
ITCH-201ENST00000262650 CAMSAP2Q08AD1 1489 aa8.17□□□□□ -1.1
ITCH-201ENST00000262650 MROH1Q8NDA8 1641 aa8.17□□□□□ -1.1
ITCH-201ENST00000262650 NCOA2Q15596 1464 aa8.16□□□□□ -1.1
ITCH-201ENST00000262650 KDM5AP29375 1690 aaKnown RBP8.16□□□□□ -1.1
ITCH-201ENST00000262650 CEBPAP49715 358 aaPredicted RBP8.16□□□□□ -1.1
ITCH-201ENST00000262650 MLECQ14165 292 aa8.16□□□□□ -1.1
ITCH-201ENST00000262650 SPATA31D1Q6ZQQ2 1576 aa8.15□□□□□ -1.1
ITCH-201ENST00000262650 MED14O60244 1454 aa8.15□□□□□ -1.1
ITCH-201ENST00000262650 MTUS2Q5JR59 1369 aa8.15□□□□□ -1.11
ITCH-201ENST00000262650 ATP1B4Q9UN42 357 aaPredicted RBP8.14□□□□□ -1.11
ITCH-201ENST00000262650 CFDP1Q9UEE9 299 aaPredicted RBP8.14□□□□□ -1.11
ITCH-201ENST00000262650 LRRC9Q6ZRR7 1453 aa8.14□□□□□ -1.11
ITCH-201ENST00000262650 NLRP1Q9C000 1473 aa8.14□□□□□ -1.11
ITCH-201ENST00000262650 MIA2Q96PC5 1412 aa8.14□□□□□ -1.11
ITCH-201ENST00000262650 HNRNPMP52272 730 aaKnown RBP eCLIP8.14□□□□□ -1.113e-6■■□□□ 12.1
ITCH-201ENST00000262650 PKD2Q13563 968 aa8.14□□□□□ -1.11
ITCH-201ENST00000262650 PPARGC1BQ86YN6 1023 aaKnown RBP8.13□□□□□ -1.11
ITCH-201ENST00000262650 VWDEQ8N2E2 1590 aa8.13□□□□□ -1.11
ITCH-201ENST00000262650 CPS1P31327 1500 aa8.13□□□□□ -1.11
ITCH-201ENST00000262650 SHANK2Q9UPX8 1470 aa8.13□□□□□ -1.11
ITCH-201ENST00000262650 VPS8Q8N3P4 1428 aa8.13□□□□□ -1.11
ITCH-201ENST00000262650 ADRA2BP18089 450 aa8.13□□□□□ -1.11
ITCH-201ENST00000262650 POLR3GLQ9BT43 218 aa8.13□□□□□ -1.11
ITCH-201ENST00000262650 ABCC3O15438 1527 aa8.12□□□□□ -1.11
ITCH-201ENST00000262650 ZNF326Q5BKZ1 582 aaKnown RBP8.12□□□□□ -1.11
ITCH-201ENST00000262650 RSPH6AQ9H0K4 717 aa8.12□□□□□ -1.11
ITCH-201ENST00000262650 PRDM15P57071 1507 aaPredicted RBP8.12□□□□□ -1.11
ITCH-201ENST00000262650 UBR1Q8IWV7 1749 aa8.12□□□□□ -1.11
ITCH-201ENST00000262650 CCDC136Q96JN2 1154 aa8.11□□□□□ -1.11
ITCH-201ENST00000262650 NECTIN2Q92692 538 aa8.11□□□□□ -1.11
ITCH-201ENST00000262650 SYNMO15061 1565 aa8.11□□□□□ -1.11
ITCH-201ENST00000262650 AAMPQ13685 434 aa8.11□□□□□ -1.11
ITCH-201ENST00000262650 IQGAP1P46940 1657 aa8.11□□□□□ -1.11
ITCH-201ENST00000262650 CEP152O94986 1710 aa8.1□□□□□ -1.11
ITCH-201ENST00000262650 DUOX2Q9NRD8 1548 aa8.1□□□□□ -1.11
ITCH-201ENST00000262650 ARHGAP31Q2M1Z3 1444 aa8.1□□□□□ -1.11
ITCH-201ENST00000262650 STRCP1A6NGW2 1772 aa8.1□□□□□ -1.11
ITCH-201ENST00000262650 ALKQ9UM73 1620 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms