RNA–Protein interactions for RNA: ENST00000262396.10

TRAF4-202, Transcript of TNF receptor associated factor 4, humanhuman

TSL 1 (best) BASIC

Gene TRAF4, Length 683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-202ENST00000262396 CEP170BQ9Y4F5 1589 aaPredicted RBP19.13■□□□□ 0.65
TRAF4-202ENST00000262396 ARHGEF5Q12774 1597 aa19.12■□□□□ 0.65
TRAF4-202ENST00000262396 KDM5DQ9BY66 1539 aa19.12■□□□□ 0.65
TRAF4-202ENST00000262396 A2ML1A8K2U0 1454 aa19.1■□□□□ 0.65
TRAF4-202ENST00000262396 PLA2R1Q13018 1463 aa19.1■□□□□ 0.65
TRAF4-202ENST00000262396 MYOM3Q5VTT5 1437 aa19.1■□□□□ 0.65
TRAF4-202ENST00000262396 ZNF335Q9H4Z2 1342 aaPredicted RBP19.1■□□□□ 0.65
TRAF4-202ENST00000262396 MAP3K1Q13233 1512 aa19.1■□□□□ 0.65
TRAF4-202ENST00000262396 MIA2Q96PC5 1412 aa19.09■□□□□ 0.65
TRAF4-202ENST00000262396 THEMISQ8N1K5 641 aaPredicted RBP19.09■□□□□ 0.65
TRAF4-202ENST00000262396 UBAP1LF5GYI3 381 aa19.08■□□□□ 0.64
TRAF4-202ENST00000262396 ANKLE2Q86XL3 938 aa19.08■□□□□ 0.64
TRAF4-202ENST00000262396 FAM135AQ9P2D6 1515 aa19.07■□□□□ 0.64
TRAF4-202ENST00000262396 PZPP20742 1482 aa19.07■□□□□ 0.64
TRAF4-202ENST00000262396 ZNF142P52746 1687 aaPredicted RBP19.07■□□□□ 0.64
TRAF4-202ENST00000262396 SCAF1Q9H7N4 1312 aaKnown RBP19.04■□□□□ 0.64
TRAF4-202ENST00000262396 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.04■□□□□ 0.649e-7■■■□□ 14.9
TRAF4-202ENST00000262396 RRP7BPQ9NSQ0 103 aa19.04■□□□□ 0.64
TRAF4-202ENST00000262396 DISP3Q9P2K9 1392 aa19.04■□□□□ 0.64
TRAF4-202ENST00000262396 LTBP4Q8N2S1 1624 aa19.03■□□□□ 0.64
TRAF4-202ENST00000262396 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
TRAF4-202ENST00000262396 IQSEC2Q5JU85 1478 aa19.03■□□□□ 0.64
TRAF4-202ENST00000262396 DNMT1P26358 1616 aaKnown RBP19.02■□□□□ 0.64
TRAF4-202ENST00000262396 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.02■□□□□ 0.641e-7■■□□□ 12.7
TRAF4-202ENST00000262396 NLRP1Q9C000 1473 aa19.01■□□□□ 0.63
TRAF4-202ENST00000262396 MAST1Q9Y2H9 1570 aa19.01■□□□□ 0.63
TRAF4-202ENST00000262396 KIF15Q9NS87 1388 aa19■□□□□ 0.63
TRAF4-202ENST00000262396 CHIC2Q9UKJ5 165 aa18.99■□□□□ 0.63
TRAF4-202ENST00000262396 DUOX2Q9NRD8 1548 aa18.99■□□□□ 0.63
TRAF4-202ENST00000262396 UGGT1Q9NYU2 1555 aa18.98■□□□□ 0.63
TRAF4-202ENST00000262396 KANK1Q14678 1352 aa18.98■□□□□ 0.63
TRAF4-202ENST00000262396 STAG3Q9UJ98 1225 aa18.98■□□□□ 0.63
TRAF4-202ENST00000262396 ABCC3O15438 1527 aa18.96■□□□□ 0.63
TRAF4-202ENST00000262396 FAM50AQ14320 339 aaKnown RBP18.96■□□□□ 0.63
TRAF4-202ENST00000262396 TOM1O60784 492 aa18.95■□□□□ 0.62
TRAF4-202ENST00000262396 PIP4K2BP78356 416 aa18.95■□□□□ 0.62
TRAF4-202ENST00000262396 PTPN23Q9H3S7 1636 aa18.95■□□□□ 0.62
TRAF4-202ENST00000262396 EIF2AK4Q9P2K8 1649 aaKnown RBP18.95■□□□□ 0.62
TRAF4-202ENST00000262396 ANKRD30AQ9BXX3 1397 aa18.94■□□□□ 0.62
TRAF4-202ENST00000262396 ABCC5O15440 1437 aa18.94■□□□□ 0.62
TRAF4-202ENST00000262396 RNF17Q9BXT8 1623 aaKnown RBP18.94■□□□□ 0.62
TRAF4-202ENST00000262396 ZC3H13Q5T200 1668 aaKnown RBP18.94■□□□□ 0.62
TRAF4-202ENST00000262396 NPHP4O75161 1426 aaPredicted RBP18.93■□□□□ 0.62
TRAF4-202ENST00000262396 FGD6Q6ZV73 1430 aa18.93■□□□□ 0.62
TRAF4-202ENST00000262396 DAPK1P53355 1430 aa18.92■□□□□ 0.62
TRAF4-202ENST00000262396 ERBINQ96RT1 1412 aa18.92■□□□□ 0.62
TRAF4-202ENST00000262396 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
TRAF4-202ENST00000262396 ERVK-7P63135 1459 aa18.91■□□□□ 0.62
TRAF4-202ENST00000262396 EID1Q9Y6B2 187 aa18.91■□□□□ 0.62
TRAF4-202ENST00000262396 POLR1AO95602 1720 aaPredicted RBP18.91■□□□□ 0.62
TRAF4-202ENST00000262396 CPS1P31327 1500 aa18.9■□□□□ 0.62
TRAF4-202ENST00000262396 TXNDC2Q86VQ3 553 aa18.88■□□□□ 0.61
TRAF4-202ENST00000262396 SPATA31D1Q6ZQQ2 1576 aa18.88■□□□□ 0.61
TRAF4-202ENST00000262396 CEP152O94986 1710 aa18.86■□□□□ 0.61
TRAF4-202ENST00000262396 NEURL4Q96JN8 1562 aa18.85■□□□□ 0.61
TRAF4-202ENST00000262396 BCANQ96GW7 911 aa18.85■□□□□ 0.61
TRAF4-202ENST00000262396 CFAP65Q6ZU64 1925 aaKnown RBP18.84■□□□□ 0.61
TRAF4-202ENST00000262396 CROCC2H7BZ55 1655 aa18.84■□□□□ 0.61
TRAF4-202ENST00000262396 MROH1Q8NDA8 1641 aa18.83■□□□□ 0.61
TRAF4-202ENST00000262396 SENP3Q9H4L4 574 aaPredicted RBP18.83■□□□□ 0.6
TRAF4-202ENST00000262396 MED14O60244 1454 aa18.83■□□□□ 0.6
TRAF4-202ENST00000262396 DEPDC5O75140 1603 aa18.82■□□□□ 0.6
TRAF4-202ENST00000262396 PRDM15P57071 1507 aaPredicted RBP18.82■□□□□ 0.6
TRAF4-202ENST00000262396 ARHGAP31Q2M1Z3 1444 aa18.82■□□□□ 0.6
TRAF4-202ENST00000262396 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
TRAF4-202ENST00000262396 SCAF11Q99590 1463 aaKnown RBP18.8■□□□□ 0.6
TRAF4-202ENST00000262396 HSPA1LP34931 641 aa18.79■□□□□ 0.6
TRAF4-202ENST00000262396 ILDR2Q71H61 639 aa18.79■□□□□ 0.6
TRAF4-202ENST00000262396 LTKP29376 864 aa18.78■□□□□ 0.6
TRAF4-202ENST00000262396 VWDEQ8N2E2 1590 aa18.77■□□□□ 0.6
TRAF4-202ENST00000262396 ITGAEP38570 1179 aa18.76■□□□□ 0.59
TRAF4-202ENST00000262396 IDI1Q13907 227 aa18.76■□□□□ 0.59
TRAF4-202ENST00000262396 ANKRD50Q9ULJ7 1429 aa18.75■□□□□ 0.59
TRAF4-202ENST00000262396 UBR1Q8IWV7 1749 aa18.74■□□□□ 0.59
TRAF4-202ENST00000262396 TMEM2Q9UHN6 1383 aa18.74■□□□□ 0.59
TRAF4-202ENST00000262396 SOCS7O14512 581 aa18.74■□□□□ 0.59
TRAF4-202ENST00000262396 PPP1R15AO75807 674 aaPredicted RBP18.74■□□□□ 0.59
TRAF4-202ENST00000262396 CHGAP10645 457 aaKnown RBP18.74■□□□□ 0.59
TRAF4-202ENST00000262396 SLC52A1Q9NWF4 448 aa18.74■□□□□ 0.59
TRAF4-202ENST00000262396 HDGFP51858 240 aaKnown RBP18.73■□□□□ 0.59
TRAF4-202ENST00000262396 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
TRAF4-202ENST00000262396 PPARGC1BQ86YN6 1023 aaKnown RBP18.72■□□□□ 0.59
TRAF4-202ENST00000262396 ADGRL2O95490 1459 aa18.71■□□□□ 0.59
TRAF4-202ENST00000262396 SLIT1O75093 1534 aa18.71■□□□□ 0.59
TRAF4-202ENST00000262396 EFCAB6Q5THR3 1501 aa18.71■□□□□ 0.59
TRAF4-202ENST00000262396 LMTK2Q8IWU2 1503 aa18.71■□□□□ 0.59
TRAF4-202ENST00000262396 PIK3C2BO00750 1634 aa18.71■□□□□ 0.58
TRAF4-202ENST00000262396 LRRC7Q96NW7 1537 aa18.7■□□□□ 0.58
TRAF4-202ENST00000262396 SLC26A8Q96RN1 970 aa18.7■□□□□ 0.58
TRAF4-202ENST00000262396 ARHGAP23Q9P227 1491 aa18.7■□□□□ 0.58
TRAF4-202ENST00000262396 PROSER2Q86WR7 435 aaPredicted RBP18.68■□□□□ 0.58
TRAF4-202ENST00000262396 SYNMO15061 1565 aa18.68■□□□□ 0.58
TRAF4-202ENST00000262396 KCNA6P17658 529 aa18.65■□□□□ 0.58
TRAF4-202ENST00000262396 NOS1P29475 1434 aa18.65■□□□□ 0.58
TRAF4-202ENST00000262396 RPRD2Q5VT52 1461 aaKnown RBP18.64■□□□□ 0.57
TRAF4-202ENST00000262396 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.62■□□□□ 0.57
TRAF4-202ENST00000262396 ADGRB3O60242 1522 aa18.62■□□□□ 0.57
TRAF4-202ENST00000262396 NUP155O75694 1391 aa18.61■□□□□ 0.57
TRAF4-202ENST00000262396 C14orf37Q86TY3 774 aa18.61■□□□□ 0.57
TRAF4-202ENST00000262396 STRCP1A6NGW2 1772 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms