RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 PLEKHH2Q8IVE3 1493 aa30.89■■■□□ 2.53
MCF2L-201ENST00000261963 FAM9BQ8IZU0 186 aa30.88■■■□□ 2.53
MCF2L-201ENST00000261963 KDM2AQ9Y2K7 1162 aa30.88■■■□□ 2.53
MCF2L-201ENST00000261963 DCAF11Q8TEB1 546 aa30.88■■■□□ 2.53
MCF2L-201ENST00000261963 CLASP1Q7Z460 1538 aa30.88■■■□□ 2.53
MCF2L-201ENST00000261963 PLXNC1O60486 1568 aa30.87■■■□□ 2.53
MCF2L-201ENST00000261963 MYT1LQ9UL68 1186 aa30.86■■■□□ 2.53
MCF2L-201ENST00000261963 PLA2R1Q13018 1463 aa30.84■■■□□ 2.53
MCF2L-201ENST00000261963 POLR3GLQ9BT43 218 aa30.84■■■□□ 2.53
MCF2L-201ENST00000261963 UHRF1BP1LA0JNW5 1464 aa30.82■■■□□ 2.52
MCF2L-201ENST00000261963 PLCH2O75038 1416 aa30.82■■■□□ 2.52
MCF2L-201ENST00000261963 ZCCHC11Q5TAX3 1644 aaKnown RBP30.82■■■□□ 2.52
MCF2L-201ENST00000261963 CCDC144AA2RUR9 1427 aa30.81■■■□□ 2.52
MCF2L-201ENST00000261963 ROCK2O75116 1388 aaKnown RBP30.79■■■□□ 2.52
MCF2L-201ENST00000261963 ZBED9Q6R2W3 1325 aa30.79■■■□□ 2.52
MCF2L-201ENST00000261963 ST20-MTHFSA0A0A6YYL1 179 aa30.78■■■□□ 2.52
MCF2L-201ENST00000261963 GRWD1Q9BQ67 446 aaKnown RBP eCLIP30.78■■■□□ 2.528e-7■■□□□ 13.6
MCF2L-201ENST00000261963 IQGAP3Q86VI3 1631 aa30.77■■■□□ 2.52
MCF2L-201ENST00000261963 DUOX2Q9NRD8 1548 aa30.77■■■□□ 2.52
MCF2L-201ENST00000261963 PRAG1Q86YV5 1406 aa30.76■■■□□ 2.51
MCF2L-201ENST00000261963 MAGI2Q86UL8 1455 aa30.74■■■□□ 2.51
MCF2L-201ENST00000261963 EFCAB2Q5VUJ9 269 aa30.73■■■□□ 2.51
MCF2L-201ENST00000261963 ERBINQ96RT1 1412 aa30.72■■■□□ 2.51
MCF2L-201ENST00000261963 ABCC1P33527 1531 aa30.71■■■□□ 2.51
MCF2L-201ENST00000261963 TRPM1Q7Z4N2 1603 aa30.7■■■□□ 2.51
MCF2L-201ENST00000261963 A2MP01023 1474 aa30.7■■■□□ 2.51
MCF2L-201ENST00000261963 CNGB1Q14028 1251 aaPredicted RBP30.69■■■□□ 2.5
MCF2L-201ENST00000261963 TRAPPC8Q9Y2L5 1435 aa30.69■■■□□ 2.5
MCF2L-201ENST00000261963 IRX6P78412 446 aaPredicted RBP30.68■■■□□ 2.5
MCF2L-201ENST00000261963 RGL3Q3MIN7 710 aa30.68■■■□□ 2.5
MCF2L-201ENST00000261963 ATP10AO60312 1499 aa30.66■■■□□ 2.5
MCF2L-201ENST00000261963 GPRASP1Q5JY77 1395 aa30.65■■■□□ 2.5
MCF2L-201ENST00000261963 ERICH6BQ5W0A0 696 aa30.64■■■□□ 2.5
MCF2L-201ENST00000261963 NBPF1Q3BBV0 1214 aa30.63■■■□□ 2.49
MCF2L-201ENST00000261963 DEKP35659 375 aaKnown RBP30.61■■■□□ 2.49
MCF2L-201ENST00000261963 E9PCH4 1651 aa30.6■■■□□ 2.49
MCF2L-201ENST00000261963 ARAP3Q8WWN8 1544 aa30.57■■■□□ 2.48
MCF2L-201ENST00000261963 PNISRQ8TF01 805 aaKnown RBP30.56■■■□□ 2.48
MCF2L-201ENST00000261963 PPP4R2Q9NY27 417 aa30.55■■■□□ 2.48
MCF2L-201ENST00000261963 LAMC1P11047 1609 aa30.55■■■□□ 2.48
MCF2L-201ENST00000261963 SPAG9O60271 1321 aaKnown RBP30.54■■■□□ 2.48
MCF2L-201ENST00000261963 PRDM15P57071 1507 aaPredicted RBP30.54■■■□□ 2.48
MCF2L-201ENST00000261963 RTEL1-TNFRSF6BF6WH68 1400 aa30.53■■■□□ 2.48
MCF2L-201ENST00000261963 AFAP1Q8N556 730 aa30.53■■■□□ 2.48
MCF2L-201ENST00000261963 ZFYVE16Q7Z3T8 1539 aa30.52■■■□□ 2.48
MCF2L-201ENST00000261963 KTN1Q86UP2 1357 aaKnown RBP30.51■■■□□ 2.48
MCF2L-201ENST00000261963 PRKCSHP14314 528 aaPredicted RBP30.51■■■□□ 2.47
MCF2L-201ENST00000261963 TMC1Q8TDI8 760 aa30.5■■■□□ 2.47
MCF2L-201ENST00000261963 EIF2AK4Q9P2K8 1649 aaKnown RBP30.49■■■□□ 2.47
MCF2L-201ENST00000261963 SMG6Q86US8 1419 aaKnown RBP30.49■■■□□ 2.47
MCF2L-201ENST00000261963 WDR7Q9Y4E6 1490 aa30.49■■■□□ 2.47
MCF2L-201ENST00000261963 RALBP1Q15311 655 aa30.49■■■□□ 2.47
MCF2L-201ENST00000261963 TESK2Q96S53 571 aa30.48■■■□□ 2.47
MCF2L-201ENST00000261963 MYBBP1AQ9BQG0 1328 aaKnown RBP30.48■■■□□ 2.47
MCF2L-201ENST00000261963 COL17A1Q9UMD9 1497 aaPredicted RBP30.48■■■□□ 2.47
MCF2L-201ENST00000261963 BRD4O60885 1362 aaPredicted RBP30.47■■■□□ 2.47
MCF2L-201ENST00000261963 LRPPRCP42704 1394 aaKnown RBP30.45■■■□□ 2.47
MCF2L-201ENST00000261963 DISP3Q9P2K9 1392 aa30.44■■■□□ 2.46
MCF2L-201ENST00000261963 PER1O15534 1290 aaPredicted RBP30.42■■■□□ 2.46
MCF2L-201ENST00000261963 ABCA9Q8IUA7 1624 aa30.41■■■□□ 2.46
MCF2L-201ENST00000261963 PARD3Q8TEW0 1356 aa30.41■■■□□ 2.46
MCF2L-201ENST00000261963 NUDCQ9Y266 331 aa30.41■■■□□ 2.46
MCF2L-201ENST00000261963 RNF17Q9BXT8 1623 aaKnown RBP30.4■■■□□ 2.46
MCF2L-201ENST00000261963 FANCAO15360 1455 aa30.4■■■□□ 2.46
MCF2L-201ENST00000261963 DEPDC5O75140 1603 aa30.4■■■□□ 2.46
MCF2L-201ENST00000261963 TRPM2O94759 1503 aa30.39■■■□□ 2.46
MCF2L-201ENST00000261963 PTPRTO14522 1441 aa30.39■■■□□ 2.45
MCF2L-201ENST00000261963 INO80Q9ULG1 1556 aaPredicted RBP30.37■■■□□ 2.45
MCF2L-201ENST00000261963 NOP58Q9Y2X3 529 aaKnown RBP30.37■■■□□ 2.45
MCF2L-201ENST00000261963 ATP7AQ04656 1500 aa30.37■■■□□ 2.45
MCF2L-201ENST00000261963 SENP3-EIF4A1A0A087X0R7 540 aa30.35■■■□□ 2.45
MCF2L-201ENST00000261963 MADDQ8WXG6 1647 aa30.34■■■□□ 2.45
MCF2L-201ENST00000261963 NLRP13Q86W25 1043 aa30.33■■■□□ 2.45
MCF2L-201ENST00000261963 VWDEQ8N2E2 1590 aa30.32■■■□□ 2.44
MCF2L-201ENST00000261963 RNF123Q5XPI4 1314 aa30.32■■■□□ 2.44
MCF2L-201ENST00000261963 SPHKAPQ2M3C7 1700 aa30.31■■■□□ 2.44
MCF2L-201ENST00000261963 CLTCL1P53675 1640 aa30.3■■■□□ 2.44
MCF2L-201ENST00000261963 TET3O43151 1660 aa30.3■■■□□ 2.44
MCF2L-201ENST00000261963 ADGRL1O94910 1474 aa30.3■■■□□ 2.44
MCF2L-201ENST00000261963 TMF1P82094 1093 aa30.3■■■□□ 2.44
MCF2L-201ENST00000261963 SCAPERQ9BY12 1400 aa30.3■■■□□ 2.44
MCF2L-201ENST00000261963 B4GALNT3Q6L9W6 998 aa30.29■■■□□ 2.44
MCF2L-201ENST00000261963 ASXL2Q76L83 1435 aa30.29■■■□□ 2.44
MCF2L-201ENST00000261963 WASHC2CQ9Y4E1 1318 aa30.29■■■□□ 2.44
MCF2L-201ENST00000261963 CEP152O94986 1710 aa30.28■■■□□ 2.44
MCF2L-201ENST00000261963 PANK3Q9H999 370 aa30.27■■■□□ 2.44
MCF2L-201ENST00000261963 NBR1Q14596 966 aa30.26■■■□□ 2.44
MCF2L-201ENST00000261963 KANK1Q14678 1352 aa30.25■■■□□ 2.43
MCF2L-201ENST00000261963 KIF3BO15066 747 aa30.24■■■□□ 2.43
MCF2L-201ENST00000261963 IQGAP1P46940 1657 aa30.23■■■□□ 2.43
MCF2L-201ENST00000261963 MROH1Q8NDA8 1641 aa30.23■■■□□ 2.43
MCF2L-201ENST00000261963 STAC3Q96MF2 364 aa30.22■■■□□ 2.43
MCF2L-201ENST00000261963 CC2D1BQ5T0F9 858 aaKnown RBP30.21■■■□□ 2.43
MCF2L-201ENST00000261963 PAK3O75914 559 aaPredicted RBP30.2■■■□□ 2.42
MCF2L-201ENST00000261963 SCAF11Q99590 1463 aaKnown RBP30.17■■■□□ 2.42
MCF2L-201ENST00000261963 NEURL4Q96JN8 1562 aa30.14■■■□□ 2.42
MCF2L-201ENST00000261963 KIDINS220Q9ULH0 1771 aa30.13■■■□□ 2.41
MCF2L-201ENST00000261963 UGGT1Q9NYU2 1555 aa30.11■■■□□ 2.41
MCF2L-201ENST00000261963 INSRP06213 1382 aa30.09■■■□□ 2.41
MCF2L-201ENST00000261963 EFCAB6Q5THR3 1501 aa30.09■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms