RNA–Protein interactions for RNA: ENST00000261813.8

PFDN1-201, Transcript of prefoldin subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN1, Length 1,352 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-201ENST00000261813 DNMT1P26358 1616 aaKnown RBP17.75■□□□□ 0.43
PFDN1-201ENST00000261813 RTEL1-TNFRSF6BF6WH68 1400 aa17.74■□□□□ 0.43
PFDN1-201ENST00000261813 DAPK1P53355 1430 aa17.74■□□□□ 0.43
PFDN1-201ENST00000261813 SIGLEC1Q9BZZ2 1709 aa17.74■□□□□ 0.43
PFDN1-201ENST00000261813 CROCC2H7BZ55 1655 aa17.73■□□□□ 0.43
PFDN1-201ENST00000261813 MAST1Q9Y2H9 1570 aa17.73■□□□□ 0.43
PFDN1-201ENST00000261813 C9orf84Q5VXU9 1444 aa17.73■□□□□ 0.43
PFDN1-201ENST00000261813 RRBP1Q9P2E9 1410 aaKnown RBP17.73■□□□□ 0.43
PFDN1-201ENST00000261813 TSPY4P0CV99 314 aa17.72■□□□□ 0.43
PFDN1-201ENST00000261813 TSPY10P0CW01 314 aa17.72■□□□□ 0.43
PFDN1-201ENST00000261813 REREQ9P2R6 1566 aa17.71■□□□□ 0.43
PFDN1-201ENST00000261813 SHANK2Q9UPX8 1470 aa17.71■□□□□ 0.42
PFDN1-201ENST00000261813 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.7■□□□□ 0.421e-20■■■■■ 166.9
PFDN1-201ENST00000261813 ADGBQ8N7X0 1667 aa17.67■□□□□ 0.42
PFDN1-201ENST00000261813 A2MP01023 1474 aa17.67■□□□□ 0.42
PFDN1-201ENST00000261813 PTPRKQ15262 1439 aa17.66■□□□□ 0.42
PFDN1-201ENST00000261813 PLXNC1O60486 1568 aa17.66■□□□□ 0.42
PFDN1-201ENST00000261813 ARID4BQ4LE39 1312 aaPredicted RBP17.66■□□□□ 0.42
PFDN1-201ENST00000261813 MKRN4PQ13434 485 aaPredicted RBP17.66■□□□□ 0.42
PFDN1-201ENST00000261813 FBXO41Q8TF61 875 aa17.66■□□□□ 0.42
PFDN1-201ENST00000261813 PTPRMP28827 1452 aa17.65■□□□□ 0.42
PFDN1-201ENST00000261813 AGLP35573 1532 aa17.64■□□□□ 0.42
PFDN1-201ENST00000261813 CHIC2Q9UKJ5 165 aa17.64■□□□□ 0.41
PFDN1-201ENST00000261813 DHX29Q7Z478 1369 aaKnown RBP17.64■□□□□ 0.41
PFDN1-201ENST00000261813 BCORL1Q5H9F3 1711 aa17.63■□□□□ 0.41
PFDN1-201ENST00000261813 ADGRL2O95490 1459 aa17.63■□□□□ 0.41
PFDN1-201ENST00000261813 NCOA1Q15788 1441 aa17.61■□□□□ 0.41
PFDN1-201ENST00000261813 ITGAEP38570 1179 aa17.6■□□□□ 0.41
PFDN1-201ENST00000261813 MLECQ14165 292 aa17.6■□□□□ 0.41
PFDN1-201ENST00000261813 ADAMTSL3P82987 1691 aa17.6■□□□□ 0.41
PFDN1-201ENST00000261813 ANKRD30AQ9BXX3 1397 aa17.59■□□□□ 0.41
PFDN1-201ENST00000261813 KIF15Q9NS87 1388 aa17.59■□□□□ 0.41
PFDN1-201ENST00000261813 RBM42Q9BTD8 480 aaKnown RBP17.59■□□□□ 0.41
PFDN1-201ENST00000261813 RRP7BPQ9NSQ0 103 aa17.59■□□□□ 0.41
PFDN1-201ENST00000261813 DUOX2Q9NRD8 1548 aa17.58■□□□□ 0.41
PFDN1-201ENST00000261813 MADDQ8WXG6 1647 aa17.56■□□□□ 0.4
PFDN1-201ENST00000261813 ROCK1Q13464 1354 aa17.56■□□□□ 0.4
PFDN1-201ENST00000261813 ERBINQ96RT1 1412 aa17.54■□□□□ 0.4
PFDN1-201ENST00000261813 KIF3BO15066 747 aa17.53■□□□□ 0.4
PFDN1-201ENST00000261813 EIF2AK4Q9P2K8 1649 aaKnown RBP17.53■□□□□ 0.4
PFDN1-201ENST00000261813 GGT6Q6P531 493 aa17.52■□□□□ 0.39
PFDN1-201ENST00000261813 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
PFDN1-201ENST00000261813 RIMS1Q86UR5 1692 aaKnown RBP17.5■□□□□ 0.39
PFDN1-201ENST00000261813 RNF17Q9BXT8 1623 aaKnown RBP17.5■□□□□ 0.39
PFDN1-201ENST00000261813 LMTK3Q96Q04 1460 aa17.49■□□□□ 0.39
PFDN1-201ENST00000261813 ANKRD50Q9ULJ7 1429 aa17.49■□□□□ 0.39
PFDN1-201ENST00000261813 MROH1Q8NDA8 1641 aa17.48■□□□□ 0.39
PFDN1-201ENST00000261813 TRIM26Q12899 539 aaPredicted RBP17.47■□□□□ 0.39
PFDN1-201ENST00000261813 NAIPQ13075 1403 aa17.45■□□□□ 0.38
PFDN1-201ENST00000261813 DEPDC5O75140 1603 aa17.45■□□□□ 0.38
PFDN1-201ENST00000261813 PRDM15P57071 1507 aaPredicted RBP17.44■□□□□ 0.38
PFDN1-201ENST00000261813 CNTLNQ9NXG0 1405 aa17.44■□□□□ 0.38
PFDN1-201ENST00000261813 KDM5DQ9BY66 1539 aa17.44■□□□□ 0.38
PFDN1-201ENST00000261813 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
PFDN1-201ENST00000261813 GCC2Q8IWJ2 1684 aa17.43■□□□□ 0.38
PFDN1-201ENST00000261813 HFM1A2PYH4 1435 aa17.43■□□□□ 0.38
PFDN1-201ENST00000261813 FAM135AQ9P2D6 1515 aa17.43■□□□□ 0.38
PFDN1-201ENST00000261813 ESF1Q9H501 851 aaKnown RBP17.42■□□□□ 0.38
PFDN1-201ENST00000261813 HSPA2P54652 639 aa17.41■□□□□ 0.38
PFDN1-201ENST00000261813 MROH2AA6NES4 1674 aa17.41■□□□□ 0.38
PFDN1-201ENST00000261813 ABCC3O15438 1527 aa17.4■□□□□ 0.38
PFDN1-201ENST00000261813 WASHC2CQ9Y4E1 1318 aa17.4■□□□□ 0.38
PFDN1-201ENST00000261813 C3P01024 1663 aa17.4■□□□□ 0.38
PFDN1-201ENST00000261813 CEBPAP49715 358 aaPredicted RBP17.4■□□□□ 0.38
PFDN1-201ENST00000261813 UNC13BO14795 1591 aa17.39■□□□□ 0.37
PFDN1-201ENST00000261813 VWDEQ8N2E2 1590 aa17.39■□□□□ 0.37
PFDN1-201ENST00000261813 ZC3H13Q5T200 1668 aaKnown RBP17.39■□□□□ 0.37
PFDN1-201ENST00000261813 SPDYE2BA6NHP3 402 aa17.39■□□□□ 0.37
PFDN1-201ENST00000261813 SPDYE6P0CI01 402 aa17.39■□□□□ 0.37
PFDN1-201ENST00000261813 SPDYE2Q495Y8 402 aa17.39■□□□□ 0.37
PFDN1-201ENST00000261813 ZMYM3Q14202 1370 aa17.39■□□□□ 0.37
PFDN1-201ENST00000261813 CEP152O94986 1710 aa17.37■□□□□ 0.37
PFDN1-201ENST00000261813 KANK1Q14678 1352 aa17.35■□□□□ 0.37
PFDN1-201ENST00000261813 LMTK2Q8IWU2 1503 aa17.35■□□□□ 0.37
PFDN1-201ENST00000261813 CAMSAP1Q5T5Y3 1602 aa17.34■□□□□ 0.37
PFDN1-201ENST00000261813 CERKQ8TCT0 537 aa17.34■□□□□ 0.37
PFDN1-201ENST00000261813 AKT1S1Q96B36 256 aa17.34■□□□□ 0.37
PFDN1-201ENST00000261813 PZPP20742 1482 aa17.33■□□□□ 0.36
PFDN1-201ENST00000261813 IQGAP3Q86VI3 1631 aa17.32■□□□□ 0.36
PFDN1-201ENST00000261813 NUP155O75694 1391 aa17.31■□□□□ 0.36
PFDN1-201ENST00000261813 SETD5Q9C0A6 1442 aa17.31■□□□□ 0.36
PFDN1-201ENST00000261813 NPATQ14207 1427 aa17.3■□□□□ 0.36
PFDN1-201ENST00000261813 ARHGAP31Q2M1Z3 1444 aa17.3■□□□□ 0.36
PFDN1-201ENST00000261813 EFCAB6Q5THR3 1501 aa17.3■□□□□ 0.36
PFDN1-201ENST00000261813 FBXO31Q5XUX0 539 aaPredicted RBP17.29■□□□□ 0.36
PFDN1-201ENST00000261813 TET3O43151 1660 aa17.28■□□□□ 0.36
PFDN1-201ENST00000261813 RAB3GAP2Q9H2M9 1393 aa17.27■□□□□ 0.36
PFDN1-201ENST00000261813 PCGF6Q9BYE7 350 aa17.27■□□□□ 0.35
PFDN1-201ENST00000261813 SPATA31D1Q6ZQQ2 1576 aa17.26■□□□□ 0.35
PFDN1-201ENST00000261813 ERVK-7P63135 1459 aa17.26■□□□□ 0.35
PFDN1-201ENST00000261813 SSUH2Q9Y2M2 353 aa17.26■□□□□ 0.35
PFDN1-201ENST00000261813 TRIM52Q96A61 297 aa17.25■□□□□ 0.35
PFDN1-201ENST00000261813 PREX1Q8TCU6 1659 aa17.24■□□□□ 0.35
PFDN1-201ENST00000261813 TNRQ92752 1358 aa17.24■□□□□ 0.35
PFDN1-201ENST00000261813 E9PCH4 1651 aa17.23■□□□□ 0.35
PFDN1-201ENST00000261813 MYO3AQ8NEV4 1616 aa17.23■□□□□ 0.35
PFDN1-201ENST00000261813 RPRD2Q5VT52 1461 aaKnown RBP17.23■□□□□ 0.35
PFDN1-201ENST00000261813 UHRF1BP1Q6BDS2 1440 aa17.22■□□□□ 0.35
PFDN1-201ENST00000261813 ZNF692Q9BU19 519 aaPredicted RBP17.21■□□□□ 0.35
PFDN1-201ENST00000261813 NOS1P29475 1434 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms