RNA–Protein interactions for RNA: ENST00000261707.7

SLC6A4-201, Transcript of solute carrier family 6 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A4, Length 6,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-201ENST00000261707 SAFB2Q14151 953 aaKnown RBP eCLIP13.32□□□□□ -0.28
SLC6A4-201ENST00000261707 R3HCC1Q9Y3T6 440 aaKnown RBP13.32□□□□□ -0.28
SLC6A4-201ENST00000261707 GGT6Q6P531 493 aa13.32□□□□□ -0.28
SLC6A4-201ENST00000261707 CHMP3Q9Y3E7 222 aa13.31□□□□□ -0.28
SLC6A4-201ENST00000261707 CENPQQ7L2Z9 268 aaPredicted RBP13.3□□□□□ -0.28
SLC6A4-201ENST00000261707 PDE4CQ08493 712 aa13.3□□□□□ -0.28
SLC6A4-201ENST00000261707 STK26Q9P289 416 aa13.3□□□□□ -0.28
SLC6A4-201ENST00000261707 CCDC66A2RUB6 948 aa13.3□□□□□ -0.28
SLC6A4-201ENST00000261707 RALBP1Q15311 655 aa13.3□□□□□ -0.28
SLC6A4-201ENST00000261707 CFDP1Q9UEE9 299 aaPredicted RBP13.29□□□□□ -0.28
SLC6A4-201ENST00000261707 FBXW7Q969H0 707 aa13.29□□□□□ -0.28
SLC6A4-201ENST00000261707 BRPF3Q9ULD4 1205 aa13.29□□□□□ -0.28
SLC6A4-201ENST00000261707 GOLGA6L19H0YKK7 550 aa13.29□□□□□ -0.28
SLC6A4-201ENST00000261707 GORABQ5T7V8 394 aa13.29□□□□□ -0.28
SLC6A4-201ENST00000261707 NFKBIBQ15653 356 aa13.28□□□□□ -0.28
SLC6A4-201ENST00000261707 CCNB3Q8WWL7 1395 aa13.28□□□□□ -0.28
SLC6A4-201ENST00000261707 CCDC34Q96HJ3 373 aa13.28□□□□□ -0.28
SLC6A4-201ENST00000261707 TCEAL9Q9UHQ7 104 aa13.27□□□□□ -0.28
SLC6A4-201ENST00000261707 MORC1Q86VD1 984 aa13.27□□□□□ -0.29
SLC6A4-201ENST00000261707 CREBRFQ8IUR6 639 aa13.27□□□□□ -0.29
SLC6A4-201ENST00000261707 CCDC70Q6NSX1 233 aa13.26□□□□□ -0.29
SLC6A4-201ENST00000261707 PDE3BQ13370 1112 aa13.26□□□□□ -0.29
SLC6A4-201ENST00000261707 CWC15Q9P013 229 aaKnown RBP13.26□□□□□ -0.29
SLC6A4-201ENST00000261707 TRIM6-TRIM34B2RNG4 842 aa13.26□□□□□ -0.29
SLC6A4-201ENST00000261707 MRE11P49959 708 aa13.25□□□□□ -0.29
SLC6A4-201ENST00000261707 CHMP5Q9NZZ3 219 aa13.24□□□□□ -0.29
SLC6A4-201ENST00000261707 BECN2A8MW95 431 aa13.24□□□□□ -0.29
SLC6A4-201ENST00000261707 ARGLU1Q9NWB6 273 aaPredicted RBP13.24□□□□□ -0.29
SLC6A4-201ENST00000261707 RBM10P98175 930 aaKnown RBP13.24□□□□□ -0.29
SLC6A4-201ENST00000261707 SETD5Q9C0A6 1442 aa13.24□□□□□ -0.29
SLC6A4-201ENST00000261707 DCAF11Q8TEB1 546 aa13.24□□□□□ -0.29
SLC6A4-201ENST00000261707 EXOC6Q8TAG9 804 aa13.23□□□□□ -0.29
SLC6A4-201ENST00000261707 RAD21O60216 631 aa13.23□□□□□ -0.29
SLC6A4-201ENST00000261707 MARCH6O60337 910 aa13.23□□□□□ -0.29
SLC6A4-201ENST00000261707 CCDC39Q9UFE4 941 aa13.23□□□□□ -0.29
SLC6A4-201ENST00000261707 DIAPH3Q9NSV4 1193 aa13.23□□□□□ -0.29
SLC6A4-201ENST00000261707 FOXD4L6Q3SYB3 417 aaPredicted RBP13.22□□□□□ -0.29
SLC6A4-201ENST00000261707 FOXD4L3Q6VB84 417 aaPredicted RBP13.22□□□□□ -0.29
SLC6A4-201ENST00000261707 SMC4Q9NTJ3 1288 aa13.22□□□□□ -0.29
SLC6A4-201ENST00000261707 CENPJQ9HC77 1338 aaPredicted RBP13.22□□□□□ -0.29
SLC6A4-201ENST00000261707 RRP1P56182 461 aaKnown RBP13.22□□□□□ -0.29
SLC6A4-201ENST00000261707 ATP6V1DQ9Y5K8 247 aa13.22□□□□□ -0.29
SLC6A4-201ENST00000261707 CEP164Q9UPV0 1460 aa13.21□□□□□ -0.29
SLC6A4-201ENST00000261707 HOMER1Q86YM7 354 aa13.21□□□□□ -0.29
SLC6A4-201ENST00000261707 RRP9O43818 475 aaKnown RBP13.21□□□□□ -0.3
SLC6A4-201ENST00000261707 WWC1Q8IX03 1113 aa13.21□□□□□ -0.3
SLC6A4-201ENST00000261707 CLUAP1Q96AJ1 413 aa13.21□□□□□ -0.3
SLC6A4-201ENST00000261707 CCAR1Q8IX12 1150 aaKnown RBP13.2□□□□□ -0.3
SLC6A4-201ENST00000261707 FBXO3Q9UK99 471 aa13.2□□□□□ -0.3
SLC6A4-201ENST00000261707 SF3A1Q15459 793 aaKnown RBP13.2□□□□□ -0.3
SLC6A4-201ENST00000261707 TSR1Q2NL82 804 aaKnown RBP13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 HDGFL2Q7Z4V5 671 aaPredicted RBP13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 NGDNQ8NEJ9 315 aaKnown RBP13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 SYTL4Q96C24 671 aaPredicted RBP13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 IFT57Q9NWB7 429 aa13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 RDXP35241 583 aaKnown RBP13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 NASPP49321 788 aaPredicted RBP13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 CRBNQ96SW2 442 aa13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 ACBD3Q9H3P7 528 aa13.19□□□□□ -0.3
SLC6A4-201ENST00000261707 RRP12Q5JTH9 1297 aaKnown RBP13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 GPATCH3Q96I76 525 aa13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 TPM1P09493 284 aa13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 MNS1Q8NEH6 495 aa13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 AK7Q96M32 723 aa13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 TPD52L1Q16890 204 aaPredicted RBP13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 HMMRO75330 724 aa13.18□□□□□ -0.3
SLC6A4-201ENST00000261707 H3BQV1 296 aa13.17□□□□□ -0.3
SLC6A4-201ENST00000261707 PLIN1O60240 522 aa13.17□□□□□ -0.3
SLC6A4-201ENST00000261707 IFFO2Q5TF58 517 aa13.17□□□□□ -0.3
SLC6A4-201ENST00000261707 NOL10Q9BSC4 688 aaKnown RBP13.17□□□□□ -0.3
SLC6A4-201ENST00000261707 PES1O00541 588 aaKnown RBP13.17□□□□□ -0.3
SLC6A4-201ENST00000261707 RASSF8Q8NHQ8 419 aa13.17□□□□□ -0.3
SLC6A4-201ENST00000261707 BCL11BQ9C0K0 894 aaPredicted RBP13.16□□□□□ -0.3
SLC6A4-201ENST00000261707 HSP90B2PQ58FF3 399 aa13.16□□□□□ -0.3
SLC6A4-201ENST00000261707 KIF3AQ9Y496 699 aa13.16□□□□□ -0.3
SLC6A4-201ENST00000261707 CEP89Q96ST8 783 aa13.16□□□□□ -0.3
SLC6A4-201ENST00000261707 H0YHG0 523 aa13.16□□□□□ -0.3
SLC6A4-201ENST00000261707 ZBED9Q6R2W3 1325 aa13.16□□□□□ -0.3
SLC6A4-201ENST00000261707 MCTP1Q6DN14 999 aa13.15□□□□□ -0.3
SLC6A4-201ENST00000261707 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.3
SLC6A4-201ENST00000261707 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.3
SLC6A4-201ENST00000261707 RUFY1Q96T51 708 aa13.15□□□□□ -0.3
SLC6A4-201ENST00000261707 CCDC146Q8IYE0 955 aa13.15□□□□□ -0.3
SLC6A4-201ENST00000261707 BAZ1BQ9UIG0 1483 aaKnown RBP13.14□□□□□ -0.31
SLC6A4-201ENST00000261707 CYB5RLQ6IPT4 315 aa13.14□□□□□ -0.31
SLC6A4-201ENST00000261707 LTV1Q96GA3 475 aaPredicted RBP13.14□□□□□ -0.31
SLC6A4-201ENST00000261707 CCDC173Q0VFZ6 552 aa13.13□□□□□ -0.31
SLC6A4-201ENST00000261707 SAMD1Q6SPF0 538 aaPredicted RBP13.13□□□□□ -0.31
SLC6A4-201ENST00000261707 PHLDB1Q86UU1 1377 aa13.13□□□□□ -0.31
SLC6A4-201ENST00000261707 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
SLC6A4-201ENST00000261707 LEKR1Q6ZMV7 388 aa13.12□□□□□ -0.31
SLC6A4-201ENST00000261707 NLRP13Q86W25 1043 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 FAM184AQ8NB25 1140 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 CCDC191Q8NCU4 936 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 UBE2Q2Q8WVN8 375 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 TRAK2O60296 914 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 PAXIP1Q6ZW49 1069 aaPredicted RBP13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 ANKRD45Q5TZF3 282 aa13.11□□□□□ -0.31
SLC6A4-201ENST00000261707 RAB3GAP2Q9H2M9 1393 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms