RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 FANCIQ9NVI1 1328 aa19.59■□□□□ 0.73
SFSWAP-201ENST00000261674 NUP155O75694 1391 aa19.58■□□□□ 0.73
SFSWAP-201ENST00000261674 GGT6Q6P531 493 aa19.58■□□□□ 0.73
SFSWAP-201ENST00000261674 MLECQ14165 292 aa19.58■□□□□ 0.72
SFSWAP-201ENST00000261674 KIF3BO15066 747 aa19.57■□□□□ 0.72
SFSWAP-201ENST00000261674 CARD11Q9BXL7 1154 aa19.57■□□□□ 0.72
SFSWAP-201ENST00000261674 ERICH6BQ5W0A0 696 aa19.56■□□□□ 0.72
SFSWAP-201ENST00000261674 SAMD9LQ8IVG5 1584 aa19.56■□□□□ 0.72
SFSWAP-201ENST00000261674 AKNAQ7Z591 1439 aa19.56■□□□□ 0.72
SFSWAP-201ENST00000261674 RPRD2Q5VT52 1461 aaKnown RBP19.55■□□□□ 0.72
SFSWAP-201ENST00000261674 CDC42BPBQ9Y5S2 1711 aa19.55■□□□□ 0.72
SFSWAP-201ENST00000261674 MBD5Q9P267 1494 aa19.55■□□□□ 0.72
SFSWAP-201ENST00000261674 NBR1Q14596 966 aa19.55■□□□□ 0.72
SFSWAP-201ENST00000261674 ANKRD50Q9ULJ7 1429 aa19.54■□□□□ 0.72
SFSWAP-201ENST00000261674 USP47Q96K76 1375 aa19.54■□□□□ 0.72
SFSWAP-201ENST00000261674 RGL3Q3MIN7 710 aa19.53■□□□□ 0.72
SFSWAP-201ENST00000261674 ADGRL1O94910 1474 aa19.52■□□□□ 0.72
SFSWAP-201ENST00000261674 DCAF11Q8TEB1 546 aa19.51■□□□□ 0.71
SFSWAP-201ENST00000261674 ITSN2Q9NZM3 1697 aa19.5■□□□□ 0.71
SFSWAP-201ENST00000261674 CCDC141Q6ZP82 1450 aa19.5■□□□□ 0.71
SFSWAP-201ENST00000261674 ST20-MTHFSA0A0A6YYL1 179 aa19.49■□□□□ 0.71
SFSWAP-201ENST00000261674 NUDCQ9Y266 331 aa19.49■□□□□ 0.71
SFSWAP-201ENST00000261674 DNMT1P26358 1616 aaKnown RBP19.48■□□□□ 0.71
SFSWAP-201ENST00000261674 TSPOAP1O95153 1857 aa19.48■□□□□ 0.71
SFSWAP-201ENST00000261674 GCC2Q8IWJ2 1684 aa19.48■□□□□ 0.71
SFSWAP-201ENST00000261674 ROCK1Q13464 1354 aa19.48■□□□□ 0.71
SFSWAP-201ENST00000261674 PLEKHH2Q8IVE3 1493 aa19.47■□□□□ 0.71
SFSWAP-201ENST00000261674 TEX14Q8IWB6 1497 aa19.47■□□□□ 0.71
SFSWAP-201ENST00000261674 RSPH4AQ5TD94 716 aa19.46■□□□□ 0.71
SFSWAP-201ENST00000261674 SPATA31E1Q6ZUB1 1445 aa19.46■□□□□ 0.71
SFSWAP-201ENST00000261674 PREX2Q70Z35 1606 aa19.46■□□□□ 0.71
SFSWAP-201ENST00000261674 MYO5CQ9NQX4 1742 aa19.45■□□□□ 0.7
SFSWAP-201ENST00000261674 NPM2Q86SE8 214 aaKnown RBP19.44■□□□□ 0.7
SFSWAP-201ENST00000261674 DNAJC5Q9H3Z4 198 aa19.43■□□□□ 0.7
SFSWAP-201ENST00000261674 PAK3O75914 559 aaPredicted RBP19.42■□□□□ 0.7
SFSWAP-201ENST00000261674 PNISRQ8TF01 805 aaKnown RBP19.42■□□□□ 0.7
SFSWAP-201ENST00000261674 CHGAP10645 457 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-201ENST00000261674 DHX29Q7Z478 1369 aaKnown RBP19.41■□□□□ 0.7
SFSWAP-201ENST00000261674 NOP58Q9Y2X3 529 aaKnown RBP19.4■□□□□ 0.7
SFSWAP-201ENST00000261674 ARID4BQ4LE39 1312 aaPredicted RBP19.4■□□□□ 0.7
SFSWAP-201ENST00000261674 KIAA1107Q9UPP5 1409 aa19.39■□□□□ 0.69
SFSWAP-201ENST00000261674 PZPP20742 1482 aa19.39■□□□□ 0.69
SFSWAP-201ENST00000261674 ANP32AP39687 249 aaKnown RBP19.38■□□□□ 0.69
SFSWAP-201ENST00000261674 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
SFSWAP-201ENST00000261674 SMG6Q86US8 1419 aaKnown RBP19.35■□□□□ 0.69
SFSWAP-201ENST00000261674 NUTM2DQ5VT03 806 aaPredicted RBP19.34■□□□□ 0.69
SFSWAP-201ENST00000261674 ABCC1P33527 1531 aa19.34■□□□□ 0.69
SFSWAP-201ENST00000261674 DEKP35659 375 aaKnown RBP19.34■□□□□ 0.69
SFSWAP-201ENST00000261674 EXOC6Q8TAG9 804 aa19.34■□□□□ 0.69
SFSWAP-201ENST00000261674 ABCA9Q8IUA7 1624 aa19.33■□□□□ 0.69
SFSWAP-201ENST00000261674 YEATS2Q9ULM3 1422 aa19.32■□□□□ 0.68
SFSWAP-201ENST00000261674 ZBTB47Q9UFB7 747 aaPredicted RBP19.32■□□□□ 0.68
SFSWAP-201ENST00000261674 ROCK2O75116 1388 aaKnown RBP19.32■□□□□ 0.68
SFSWAP-201ENST00000261674 NBPF1Q3BBV0 1214 aa19.31■□□□□ 0.68
SFSWAP-201ENST00000261674 WASHC2CQ9Y4E1 1318 aa19.3■□□□□ 0.68
SFSWAP-201ENST00000261674 CDCA7LQ96GN5 454 aa19.29■□□□□ 0.68
SFSWAP-201ENST00000261674 PLIN1O60240 522 aa19.29■□□□□ 0.68
SFSWAP-201ENST00000261674 RCAN3Q9UKA8 241 aa19.29■□□□□ 0.68
SFSWAP-201ENST00000261674 MYBBP1AQ9BQG0 1328 aaKnown RBP19.28■□□□□ 0.68
SFSWAP-201ENST00000261674 ADGRL2O95490 1459 aa19.27■□□□□ 0.68
SFSWAP-201ENST00000261674 BCORL1Q5H9F3 1711 aa19.27■□□□□ 0.67
SFSWAP-201ENST00000261674 COL17A1Q9UMD9 1497 aaPredicted RBP19.26■□□□□ 0.67
SFSWAP-201ENST00000261674 RALBP1Q15311 655 aa19.26■□□□□ 0.67
SFSWAP-201ENST00000261674 RRP1P56182 461 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-201ENST00000261674 RTL5Q5HYW3 569 aaPredicted RBP19.25■□□□□ 0.67
SFSWAP-201ENST00000261674 ARHGEF5Q12774 1597 aa19.25■□□□□ 0.67
SFSWAP-201ENST00000261674 IPO9Q96P70 1041 aaKnown RBP19.25■□□□□ 0.67
SFSWAP-201ENST00000261674 POGZQ7Z3K3 1410 aa19.24■□□□□ 0.67
SFSWAP-201ENST00000261674 SKAP1Q86WV1 359 aa19.23■□□□□ 0.67
SFSWAP-201ENST00000261674 ZNF518AQ6AHZ1 1483 aa19.23■□□□□ 0.67
SFSWAP-201ENST00000261674 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
SFSWAP-201ENST00000261674 ATP7AQ04656 1500 aa19.22■□□□□ 0.67
SFSWAP-201ENST00000261674 NLRP13Q86W25 1043 aa19.22■□□□□ 0.67
SFSWAP-201ENST00000261674 DIP2BQ9P265 1576 aa19.22■□□□□ 0.67
SFSWAP-201ENST00000261674 CROCC2H7BZ55 1655 aa19.22■□□□□ 0.67
SFSWAP-201ENST00000261674 FBXO31Q5XUX0 539 aaPredicted RBP19.21■□□□□ 0.67
SFSWAP-201ENST00000261674 RNF123Q5XPI4 1314 aa19.2■□□□□ 0.66
SFSWAP-201ENST00000261674 KTN1Q86UP2 1357 aaKnown RBP19.2■□□□□ 0.66
SFSWAP-201ENST00000261674 LAS1LQ9Y4W2 734 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-201ENST00000261674 CFAP65Q6ZU64 1925 aaKnown RBP19.19■□□□□ 0.66
SFSWAP-201ENST00000261674 PANK3Q9H999 370 aa19.19■□□□□ 0.66
SFSWAP-201ENST00000261674 ADGBQ8N7X0 1667 aa19.19■□□□□ 0.66
SFSWAP-201ENST00000261674 ZFYVE16Q7Z3T8 1539 aa19.19■□□□□ 0.66
SFSWAP-201ENST00000261674 BRD4O60885 1362 aaPredicted RBP19.18■□□□□ 0.66
SFSWAP-201ENST00000261674 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
SFSWAP-201ENST00000261674 A2MP01023 1474 aa19.16■□□□□ 0.66
SFSWAP-201ENST00000261674 FAM135AQ9P2D6 1515 aa19.16■□□□□ 0.66
SFSWAP-201ENST00000261674 CEBPAP49715 358 aaPredicted RBP19.16■□□□□ 0.66
SFSWAP-201ENST00000261674 KANK1Q14678 1352 aa19.16■□□□□ 0.66
SFSWAP-201ENST00000261674 DUOX2Q9NRD8 1548 aa19.15■□□□□ 0.66
SFSWAP-201ENST00000261674 CCDC144AA2RUR9 1427 aa19.14■□□□□ 0.65
SFSWAP-201ENST00000261674 KDM5CP41229 1560 aa19.14■□□□□ 0.65
SFSWAP-201ENST00000261674 PDE4AP27815 886 aa19.13■□□□□ 0.65
SFSWAP-201ENST00000261674 RALGAPBQ86X10 1494 aa19.13■□□□□ 0.65
SFSWAP-201ENST00000261674 NEO1Q92859 1461 aa19.12■□□□□ 0.65
SFSWAP-201ENST00000261674 RTEL1-TNFRSF6BF6WH68 1400 aa19.12■□□□□ 0.65
SFSWAP-201ENST00000261674 LRPPRCP42704 1394 aaKnown RBP19.1■□□□□ 0.65
SFSWAP-201ENST00000261674 CRBNQ96SW2 442 aa19.1■□□□□ 0.65
SFSWAP-201ENST00000261674 KIDINS220Q9ULH0 1771 aa19.1■□□□□ 0.65
SFSWAP-201ENST00000261674 STAG3Q9UJ98 1225 aa19.1■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms