RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 SPATA31E1Q6ZUB1 1445 aa14.78□□□□□ -0.04
CHRNA1-201ENST00000261007 IQGAP3Q86VI3 1631 aa14.78□□□□□ -0.04
CHRNA1-201ENST00000261007 WASHC2AQ641Q2 1341 aa14.77□□□□□ -0.04
CHRNA1-201ENST00000261007 WDR7Q9Y4E6 1490 aa14.77□□□□□ -0.04
CHRNA1-201ENST00000261007 CNTLNQ9NXG0 1405 aa14.77□□□□□ -0.05
CHRNA1-201ENST00000261007 RTEL1-TNFRSF6BF6WH68 1400 aa14.76□□□□□ -0.05
CHRNA1-201ENST00000261007 MAGI2Q86UL8 1455 aa14.76□□□□□ -0.05
CHRNA1-201ENST00000261007 CCDC7Q96M83 1385 aa14.76□□□□□ -0.05
CHRNA1-201ENST00000261007 RALGAPBQ86X10 1494 aa14.75□□□□□ -0.05
CHRNA1-201ENST00000261007 ARID4BQ4LE39 1312 aaPredicted RBP14.74□□□□□ -0.05
CHRNA1-201ENST00000261007 ABCA9Q8IUA7 1624 aa14.73□□□□□ -0.05
CHRNA1-201ENST00000261007 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
CHRNA1-201ENST00000261007 CCDC144AA2RUR9 1427 aa14.72□□□□□ -0.05
CHRNA1-201ENST00000261007 ATP10AO60312 1499 aa14.72□□□□□ -0.05
CHRNA1-201ENST00000261007 KDM5CP41229 1560 aa14.7□□□□□ -0.06
CHRNA1-201ENST00000261007 DEKP35659 375 aaKnown RBP14.7□□□□□ -0.06
CHRNA1-201ENST00000261007 USP47Q96K76 1375 aa14.7□□□□□ -0.06
CHRNA1-201ENST00000261007 IRX6P78412 446 aaPredicted RBP14.69□□□□□ -0.06
CHRNA1-201ENST00000261007 TRAPPC8Q9Y2L5 1435 aa14.68□□□□□ -0.06
CHRNA1-201ENST00000261007 ZFYVE16Q7Z3T8 1539 aa14.68□□□□□ -0.06
CHRNA1-201ENST00000261007 SPAG9O60271 1321 aaKnown RBP14.67□□□□□ -0.06
CHRNA1-201ENST00000261007 ROCK2O75116 1388 aaKnown RBP14.67□□□□□ -0.06
CHRNA1-201ENST00000261007 OSCARQ8IYS5 282 aa14.67□□□□□ -0.06
CHRNA1-201ENST00000261007 FANCAO15360 1455 aa14.67□□□□□ -0.06
CHRNA1-201ENST00000261007 KIF7Q2M1P5 1343 aa14.66□□□□□ -0.06
CHRNA1-201ENST00000261007 ZBED9Q6R2W3 1325 aa14.65□□□□□ -0.06
CHRNA1-201ENST00000261007 EIF2AK4Q9P2K8 1649 aaKnown RBP14.65□□□□□ -0.06
CHRNA1-201ENST00000261007 INO80Q9ULG1 1556 aaPredicted RBP14.65□□□□□ -0.06
CHRNA1-201ENST00000261007 NOP58Q9Y2X3 529 aaKnown RBP14.65□□□□□ -0.06
CHRNA1-201ENST00000261007 LAMC1P11047 1609 aa14.64□□□□□ -0.07
CHRNA1-201ENST00000261007 ASXL2Q76L83 1435 aa14.64□□□□□ -0.07
CHRNA1-201ENST00000261007 DEPDC5O75140 1603 aa14.64□□□□□ -0.07
CHRNA1-201ENST00000261007 CFAP74Q9C0B2 1584 aa14.64□□□□□ -0.07
CHRNA1-201ENST00000261007 ATP7AQ04656 1500 aa14.63□□□□□ -0.07
CHRNA1-201ENST00000261007 C11orf95C9JLR9 678 aaPredicted RBP14.63□□□□□ -0.07
CHRNA1-201ENST00000261007 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
CHRNA1-201ENST00000261007 ZNF326Q5BKZ1 582 aaKnown RBP14.63□□□□□ -0.07
CHRNA1-201ENST00000261007 PLA2R1Q13018 1463 aa14.63□□□□□ -0.07
CHRNA1-201ENST00000261007 CARD11Q9BXL7 1154 aa14.62□□□□□ -0.07
CHRNA1-201ENST00000261007 PRAG1Q86YV5 1406 aa14.62□□□□□ -0.07
CHRNA1-201ENST00000261007 DCAF11Q8TEB1 546 aa14.62□□□□□ -0.07
CHRNA1-201ENST00000261007 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.62□□□□□ -0.07
CHRNA1-201ENST00000261007 ADGRL1O94910 1474 aa14.61□□□□□ -0.07
CHRNA1-201ENST00000261007 TRPM1Q7Z4N2 1603 aa14.61□□□□□ -0.07
CHRNA1-201ENST00000261007 STAC3Q96MF2 364 aa14.61□□□□□ -0.07
CHRNA1-201ENST00000261007 PRKRIP1Q9H875 184 aaPredicted RBP14.6□□□□□ -0.07
CHRNA1-201ENST00000261007 KANK1Q14678 1352 aa14.6□□□□□ -0.07
CHRNA1-201ENST00000261007 BCORL1Q5H9F3 1711 aa14.6□□□□□ -0.07
CHRNA1-201ENST00000261007 TET3O43151 1660 aa14.59□□□□□ -0.07
CHRNA1-201ENST00000261007 GPRASP1Q5JY77 1395 aa14.59□□□□□ -0.07
CHRNA1-201ENST00000261007 B4GALNT3Q6L9W6 998 aa14.58□□□□□ -0.07
CHRNA1-201ENST00000261007 A2MP01023 1474 aa14.58□□□□□ -0.08
CHRNA1-201ENST00000261007 SCAPERQ9BY12 1400 aa14.58□□□□□ -0.08
CHRNA1-201ENST00000261007 TRPM2O94759 1503 aa14.58□□□□□ -0.08
CHRNA1-201ENST00000261007 VWDEQ8N2E2 1590 aa14.58□□□□□ -0.08
CHRNA1-201ENST00000261007 KDM2AQ9Y2K7 1162 aa14.57□□□□□ -0.08
CHRNA1-201ENST00000261007 E9PCH4 1651 aa14.57□□□□□ -0.08
CHRNA1-201ENST00000261007 NEURL4Q96JN8 1562 aa14.57□□□□□ -0.08
CHRNA1-201ENST00000261007 ZNF518AQ6AHZ1 1483 aa14.56□□□□□ -0.08
CHRNA1-201ENST00000261007 AFAP1Q8N556 730 aa14.56□□□□□ -0.08
CHRNA1-201ENST00000261007 DHX29Q7Z478 1369 aaKnown RBP14.56□□□□□ -0.08
CHRNA1-201ENST00000261007 PRDM15P57071 1507 aaPredicted RBP14.56□□□□□ -0.08
CHRNA1-201ENST00000261007 PTPRTO14522 1441 aa14.56□□□□□ -0.08
CHRNA1-201ENST00000261007 SMG6Q86US8 1419 aaKnown RBP14.56□□□□□ -0.08
CHRNA1-201ENST00000261007 SPHKAPQ2M3C7 1700 aa14.55□□□□□ -0.08
CHRNA1-201ENST00000261007 KTN1Q86UP2 1357 aaKnown RBP14.55□□□□□ -0.08
CHRNA1-201ENST00000261007 CEP152O94986 1710 aa14.54□□□□□ -0.08
CHRNA1-201ENST00000261007 CCDC184Q52MB2 194 aa14.54□□□□□ -0.08
CHRNA1-201ENST00000261007 RNF123Q5XPI4 1314 aa14.54□□□□□ -0.08
CHRNA1-201ENST00000261007 MRS2Q9HD23 443 aa14.53□□□□□ -0.08
CHRNA1-201ENST00000261007 IPO9Q96P70 1041 aaKnown RBP14.53□□□□□ -0.08
CHRNA1-201ENST00000261007 ANP32AP39687 249 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 RNF17Q9BXT8 1623 aaKnown RBP14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 CD109Q6YHK3 1445 aa14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 FAM9BQ8IZU0 186 aa14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 KIDINS220Q9ULH0 1771 aa14.51□□□□□ -0.09
CHRNA1-201ENST00000261007 RGL3Q3MIN7 710 aa14.5□□□□□ -0.09
CHRNA1-201ENST00000261007 LMTK2Q8IWU2 1503 aa14.5□□□□□ -0.09
CHRNA1-201ENST00000261007 MLH3Q9UHC1 1453 aa14.49□□□□□ -0.09
CHRNA1-201ENST00000261007 PRKCSHP14314 528 aaPredicted RBP14.49□□□□□ -0.09
CHRNA1-201ENST00000261007 POGZQ7Z3K3 1410 aa14.49□□□□□ -0.09
CHRNA1-201ENST00000261007 MROH1Q8NDA8 1641 aa14.49□□□□□ -0.09
CHRNA1-201ENST00000261007 NEO1Q92859 1461 aa14.49□□□□□ -0.09
CHRNA1-201ENST00000261007 KIF3BO15066 747 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 NBR1Q14596 966 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 RTL5Q5HYW3 569 aaPredicted RBP14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 CLTCL1P53675 1640 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 MADDQ8WXG6 1647 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 ZBTB47Q9UFB7 747 aaPredicted RBP14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 NUDCQ9Y266 331 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 HECW2Q9P2P5 1572 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 EFCAB6Q5THR3 1501 aa14.47□□□□□ -0.09
CHRNA1-201ENST00000261007 COL17A1Q9UMD9 1497 aaPredicted RBP14.46□□□□□ -0.09
CHRNA1-201ENST00000261007 KIAA1210Q9ULL0 1709 aa14.46□□□□□ -0.09
CHRNA1-201ENST00000261007 POLR3GLQ9BT43 218 aa14.45□□□□□ -0.1
CHRNA1-201ENST00000261007 RALBP1Q15311 655 aa14.45□□□□□ -0.1
CHRNA1-201ENST00000261007 WASHC2CQ9Y4E1 1318 aa14.44□□□□□ -0.1
CHRNA1-201ENST00000261007 CCDC136Q96JN2 1154 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms