RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 YEATS2Q9ULM3 1422 aa26.17■■□□□ 1.78
CCDC115-201ENST00000259229 MROH1Q8NDA8 1641 aa26.16■■□□□ 1.78
CCDC115-201ENST00000259229 ZEB1P37275 1124 aaPredicted RBP26.14■■□□□ 1.78
CCDC115-201ENST00000259229 MPHOSPH9Q99550 1183 aa26.14■■□□□ 1.77
CCDC115-201ENST00000259229 FAM135AQ9P2D6 1515 aa26.13■■□□□ 1.77
CCDC115-201ENST00000259229 RNF17Q9BXT8 1623 aaKnown RBP26.13■■□□□ 1.77
CCDC115-201ENST00000259229 MYT1LQ9UL68 1186 aa26.12■■□□□ 1.77
CCDC115-201ENST00000259229 NUP155O75694 1391 aa26.12■■□□□ 1.77
CCDC115-201ENST00000259229 PRDM15P57071 1507 aaPredicted RBP26.12■■□□□ 1.77
CCDC115-201ENST00000259229 VWDEQ8N2E2 1590 aa26.11■■□□□ 1.77
CCDC115-201ENST00000259229 ARHGEF40Q8TER5 1519 aa26.1■■□□□ 1.77
CCDC115-201ENST00000259229 REREQ9P2R6 1566 aa26.09■■□□□ 1.77
CCDC115-201ENST00000259229 SIGLEC1Q9BZZ2 1709 aa26.06■■□□□ 1.76
CCDC115-201ENST00000259229 SLC4A1APQ9BWU0 796 aaKnown RBP26.06■■□□□ 1.76
CCDC115-201ENST00000259229 ATP10AO60312 1499 aa26.02■■□□□ 1.76
CCDC115-201ENST00000259229 FOXD1Q16676 465 aa26.01■■□□□ 1.75
CCDC115-201ENST00000259229 ANKRD30BQ9BXX2 1392 aa26■■□□□ 1.75
CCDC115-201ENST00000259229 KIF3BO15066 747 aa26■■□□□ 1.75
CCDC115-201ENST00000259229 TET3O43151 1660 aa25.99■■□□□ 1.75
CCDC115-201ENST00000259229 SIN3AQ96ST3 1273 aa25.99■■□□□ 1.75
CCDC115-201ENST00000259229 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.98■■□□□ 1.75
CCDC115-201ENST00000259229 AGLP35573 1532 aa25.98■■□□□ 1.75
CCDC115-201ENST00000259229 CEP152O94986 1710 aa25.98■■□□□ 1.75
CCDC115-201ENST00000259229 E9PCH4 1651 aa25.97■■□□□ 1.75
CCDC115-201ENST00000259229 PKD2Q13563 968 aa25.97■■□□□ 1.75
CCDC115-201ENST00000259229 LMTK2Q8IWU2 1503 aa25.96■■□□□ 1.75
CCDC115-201ENST00000259229 EFCAB6Q5THR3 1501 aa25.92■■□□□ 1.74
CCDC115-201ENST00000259229 KANK1Q14678 1352 aa25.9■■□□□ 1.74
CCDC115-201ENST00000259229 ABCC3O15438 1527 aa25.9■■□□□ 1.74
CCDC115-201ENST00000259229 ZC3H13Q5T200 1668 aaKnown RBP25.9■■□□□ 1.74
CCDC115-201ENST00000259229 RPRD2Q5VT52 1461 aaKnown RBP25.89■■□□□ 1.73
CCDC115-201ENST00000259229 PLA2R1Q13018 1463 aa25.88■■□□□ 1.73
CCDC115-201ENST00000259229 CAMSAP1Q5T5Y3 1602 aa25.86■■□□□ 1.73
CCDC115-201ENST00000259229 NEUROD1Q13562 356 aa25.86■■□□□ 1.73
CCDC115-201ENST00000259229 SPHKAPQ2M3C7 1700 aa25.85■■□□□ 1.73
CCDC115-201ENST00000259229 GGT6Q6P531 493 aa25.82■■□□□ 1.72
CCDC115-201ENST00000259229 TRPM2O94759 1503 aa25.81■■□□□ 1.72
CCDC115-201ENST00000259229 PTPRTO14522 1441 aa25.8■■□□□ 1.72
CCDC115-201ENST00000259229 TIMELESSQ9UNS1 1208 aa25.79■■□□□ 1.72
CCDC115-201ENST00000259229 NPATQ14207 1427 aa25.77■■□□□ 1.72
CCDC115-201ENST00000259229 TONSLQ96HA7 1378 aa25.76■■□□□ 1.71
CCDC115-201ENST00000259229 CLTCQ00610 1675 aaKnown RBP25.74■■□□□ 1.71
CCDC115-201ENST00000259229 CLTCL1P53675 1640 aa25.74■■□□□ 1.71
CCDC115-201ENST00000259229 WASHC2CQ9Y4E1 1318 aa25.73■■□□□ 1.71
CCDC115-201ENST00000259229 ARHGAP31Q2M1Z3 1444 aa25.73■■□□□ 1.71
CCDC115-201ENST00000259229 CCDC144AA2RUR9 1427 aa25.72■■□□□ 1.71
CCDC115-201ENST00000259229 UGGT1Q9NYU2 1555 aa25.67■■□□□ 1.7
CCDC115-201ENST00000259229 PREX1Q8TCU6 1659 aa25.67■■□□□ 1.7
CCDC115-201ENST00000259229 PPP6R1Q9UPN7 881 aa25.66■■□□□ 1.7
CCDC115-201ENST00000259229 SYNMO15061 1565 aa25.66■■□□□ 1.7
CCDC115-201ENST00000259229 NOS1P29475 1434 aa25.66■■□□□ 1.7
CCDC115-201ENST00000259229 CFAP65Q6ZU64 1925 aaKnown RBP25.65■■□□□ 1.7
CCDC115-201ENST00000259229 PPP1R15AO75807 674 aaPredicted RBP25.65■■□□□ 1.7
CCDC115-201ENST00000259229 L3MBTL2Q969R5 705 aa25.65■■□□□ 1.7
CCDC115-201ENST00000259229 PIK3C2BO00750 1634 aa25.64■■□□□ 1.7
CCDC115-201ENST00000259229 CNTLNQ9NXG0 1405 aa25.64■■□□□ 1.69
CCDC115-201ENST00000259229 SPATA31E1Q6ZUB1 1445 aa25.62■■□□□ 1.69
CCDC115-201ENST00000259229 NEURL4Q96JN8 1562 aa25.62■■□□□ 1.69
CCDC115-201ENST00000259229 MROH2AA6NES4 1674 aa25.61■■□□□ 1.69
CCDC115-201ENST00000259229 MLECQ14165 292 aa25.61■■□□□ 1.69
CCDC115-201ENST00000259229 ARID4BQ4LE39 1312 aaPredicted RBP25.58■■□□□ 1.69
CCDC115-201ENST00000259229 KIF1BO60333 1816 aa25.58■■□□□ 1.69
CCDC115-201ENST00000259229 ERVK-7P63135 1459 aa25.58■■□□□ 1.68
CCDC115-201ENST00000259229 FER1L4A9Z1Z3 1794 aa25.57■■□□□ 1.68
CCDC115-201ENST00000259229 SPATA31D1Q6ZQQ2 1576 aa25.57■■□□□ 1.68
CCDC115-201ENST00000259229 ADGRB3O60242 1522 aa25.55■■□□□ 1.68
CCDC115-201ENST00000259229 IFT172Q9UG01 1749 aa25.52■■□□□ 1.68
CCDC115-201ENST00000259229 UHRF1BP1Q6BDS2 1440 aa25.51■■□□□ 1.67
CCDC115-201ENST00000259229 ZMYM3Q14202 1370 aa25.49■■□□□ 1.67
CCDC115-201ENST00000259229 C3P01024 1663 aa25.49■■□□□ 1.67
CCDC115-201ENST00000259229 NBPF8Q3BBV2 869 aa25.48■■□□□ 1.67
CCDC115-201ENST00000259229 FBXO31Q5XUX0 539 aaPredicted RBP25.48■■□□□ 1.67
CCDC115-201ENST00000259229 ADAMTSL3P82987 1691 aa25.47■■□□□ 1.67
CCDC115-201ENST00000259229 MADDQ8WXG6 1647 aa25.47■■□□□ 1.67
CCDC115-201ENST00000259229 RGL3Q3MIN7 710 aa25.45■■□□□ 1.66
CCDC115-201ENST00000259229 TMEM131LA2VDJ0 1609 aa25.44■■□□□ 1.66
CCDC115-201ENST00000259229 MYO5BQ9ULV0 1848 aa25.44■■□□□ 1.66
CCDC115-201ENST00000259229 PPLO60437 1756 aa25.42■■□□□ 1.66
CCDC115-201ENST00000259229 DCAF11Q8TEB1 546 aa25.42■■□□□ 1.66
CCDC115-201ENST00000259229 ESF1Q9H501 851 aaKnown RBP25.42■■□□□ 1.66
CCDC115-201ENST00000259229 PRAG1Q86YV5 1406 aa25.42■■□□□ 1.66
CCDC115-201ENST00000259229 TRPM1Q7Z4N2 1603 aa25.42■■□□□ 1.66
CCDC115-201ENST00000259229 RIMS1Q86UR5 1692 aaKnown RBP25.41■■□□□ 1.66
CCDC115-201ENST00000259229 RALGAPBQ86X10 1494 aa25.39■■□□□ 1.66
CCDC115-201ENST00000259229 IDI1Q13907 227 aa25.39■■□□□ 1.66
CCDC115-201ENST00000259229 SLC52A1Q9NWF4 448 aa25.39■■□□□ 1.66
CCDC115-201ENST00000259229 MYOM2P54296 1465 aa25.39■■□□□ 1.65
CCDC115-201ENST00000259229 NEXMIFQ5QGS0 1516 aa25.37■■□□□ 1.65
CCDC115-201ENST00000259229 KDM2AQ9Y2K7 1162 aa25.37■■□□□ 1.65
CCDC115-201ENST00000259229 NRXN1Q9ULB1 1477 aa25.34■■□□□ 1.65
CCDC115-201ENST00000259229 KDM5AP29375 1690 aaKnown RBP25.33■■□□□ 1.65
CCDC115-201ENST00000259229 TNRQ92752 1358 aa25.33■■□□□ 1.64
CCDC115-201ENST00000259229 ZNF326Q5BKZ1 582 aaKnown RBP25.31■■□□□ 1.64
CCDC115-201ENST00000259229 ZNF316A6NFI3 1004 aaPredicted RBP25.3■■□□□ 1.64
CCDC115-201ENST00000259229 A2ML1A8K2U0 1454 aa25.3■■□□□ 1.64
CCDC115-201ENST00000259229 CEBPAP49715 358 aaPredicted RBP25.3■■□□□ 1.64
CCDC115-201ENST00000259229 UBR1Q8IWV7 1749 aa25.29■■□□□ 1.64
CCDC115-201ENST00000259229 KIAA1210Q9ULL0 1709 aa25.29■■□□□ 1.64
CCDC115-201ENST00000259229 LAMC1P11047 1609 aa25.29■■□□□ 1.64
CCDC115-201ENST00000259229 CHGAP10645 457 aaKnown RBP25.29■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms