RNA–Protein interactions for RNA: ENST00000259003.14

CSHL1-201, Transcript of chorionic somatomammotropin hormone like 1, humanhuman

TSL 1 (best) BASIC

Gene CSHL1, Length 739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSHL1-201ENST00000259003 PKD2Q13563 968 aa20.43■□□□□ 0.86
CSHL1-201ENST00000259003 CAMSAP2Q08AD1 1489 aa20.43■□□□□ 0.86
CSHL1-201ENST00000259003 KIF3BO15066 747 aa20.42■□□□□ 0.86
CSHL1-201ENST00000259003 RTEL1-TNFRSF6BF6WH68 1400 aa20.42■□□□□ 0.86
CSHL1-201ENST00000259003 NCOA2Q15596 1464 aa20.42■□□□□ 0.86
CSHL1-201ENST00000259003 PPP6R1Q9UPN7 881 aa20.4■□□□□ 0.86
CSHL1-201ENST00000259003 CCDC141Q6ZP82 1450 aa20.39■□□□□ 0.85
CSHL1-201ENST00000259003 TNRQ92752 1358 aa20.37■□□□□ 0.85
CSHL1-201ENST00000259003 KDM5DQ9BY66 1539 aa20.37■□□□□ 0.85
CSHL1-201ENST00000259003 PZPP20742 1482 aa20.36■□□□□ 0.85
CSHL1-201ENST00000259003 STRCP1A6NGW2 1772 aa20.34■□□□□ 0.85
CSHL1-201ENST00000259003 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.33■□□□□ 0.84
CSHL1-201ENST00000259003 ARHGEF5Q12774 1597 aa20.32■□□□□ 0.84
CSHL1-201ENST00000259003 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
CSHL1-201ENST00000259003 VWDEQ8N2E2 1590 aa20.31■□□□□ 0.84
CSHL1-201ENST00000259003 CEP152O94986 1710 aa20.3■□□□□ 0.84
CSHL1-201ENST00000259003 ALKQ9UM73 1620 aa20.29■□□□□ 0.84
CSHL1-201ENST00000259003 PIP4K2BP78356 416 aa20.29■□□□□ 0.84
CSHL1-201ENST00000259003 SHANK2Q9UPX8 1470 aa20.29■□□□□ 0.84
CSHL1-201ENST00000259003 SCAF1Q9H7N4 1312 aaKnown RBP20.28■□□□□ 0.84
CSHL1-201ENST00000259003 MIA2Q96PC5 1412 aa20.28■□□□□ 0.84
CSHL1-201ENST00000259003 LOC105371045A0A1W2PR82 267 aa20.28■□□□□ 0.84
CSHL1-201ENST00000259003 HSPA1LP34931 641 aa20.28■□□□□ 0.84
CSHL1-201ENST00000259003 RNF17Q9BXT8 1623 aaKnown RBP20.27■□□□□ 0.84
CSHL1-201ENST00000259003 KANK4Q5T7N3 995 aaPredicted RBP20.27■□□□□ 0.84
CSHL1-201ENST00000259003 MROH1Q8NDA8 1641 aa20.27■□□□□ 0.83
CSHL1-201ENST00000259003 UGGT1Q9NYU2 1555 aa20.26■□□□□ 0.83
CSHL1-201ENST00000259003 ABCC3O15438 1527 aa20.26■□□□□ 0.83
CSHL1-201ENST00000259003 LRRC9Q6ZRR7 1453 aa20.25■□□□□ 0.83
CSHL1-201ENST00000259003 FAM135AQ9P2D6 1515 aa20.25■□□□□ 0.83
CSHL1-201ENST00000259003 IQGAP1P46940 1657 aa20.25■□□□□ 0.83
CSHL1-201ENST00000259003 CPS1P31327 1500 aa20.24■□□□□ 0.83
CSHL1-201ENST00000259003 RSPH4AQ5TD94 716 aa20.24■□□□□ 0.83
CSHL1-201ENST00000259003 MAST1Q9Y2H9 1570 aa20.24■□□□□ 0.83
CSHL1-201ENST00000259003 DEPDC5O75140 1603 aa20.24■□□□□ 0.83
CSHL1-201ENST00000259003 ANKLE2Q86XL3 938 aa20.23■□□□□ 0.83
CSHL1-201ENST00000259003 NLRP1Q9C000 1473 aa20.23■□□□□ 0.83
CSHL1-201ENST00000259003 MED1Q15648 1581 aaPredicted RBP20.22■□□□□ 0.83
CSHL1-201ENST00000259003 NPHP4O75161 1426 aaPredicted RBP20.22■□□□□ 0.83
CSHL1-201ENST00000259003 TSPY4P0CV99 314 aa20.22■□□□□ 0.83
CSHL1-201ENST00000259003 TSPY10P0CW01 314 aa20.22■□□□□ 0.83
CSHL1-201ENST00000259003 THEMISQ8N1K5 641 aaPredicted RBP20.21■□□□□ 0.83
CSHL1-201ENST00000259003 UBR1Q8IWV7 1749 aa20.21■□□□□ 0.83
CSHL1-201ENST00000259003 VPS8Q8N3P4 1428 aa20.2■□□□□ 0.82
CSHL1-201ENST00000259003 ZC3H13Q5T200 1668 aaKnown RBP20.2■□□□□ 0.82
CSHL1-201ENST00000259003 MED14O60244 1454 aa20.2■□□□□ 0.82
CSHL1-201ENST00000259003 ERVK-7P63135 1459 aa20.19■□□□□ 0.82
CSHL1-201ENST00000259003 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
CSHL1-201ENST00000259003 EIF2AK4Q9P2K8 1649 aaKnown RBP20.19■□□□□ 0.82
CSHL1-201ENST00000259003 XIRP1Q702N8 1843 aaKnown RBP20.18■□□□□ 0.82
CSHL1-201ENST00000259003 TOM1O60784 492 aa20.17■□□□□ 0.82
CSHL1-201ENST00000259003 LRRC7Q96NW7 1537 aa20.14■□□□□ 0.81
CSHL1-201ENST00000259003 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
CSHL1-201ENST00000259003 MYOM3Q5VTT5 1437 aa20.13■□□□□ 0.81
CSHL1-201ENST00000259003 LTKP29376 864 aa20.11■□□□□ 0.81
CSHL1-201ENST00000259003 DUOX2Q9NRD8 1548 aa20.09■□□□□ 0.81
CSHL1-201ENST00000259003 PIK3C2BO00750 1634 aa20.09■□□□□ 0.81
CSHL1-201ENST00000259003 MAP3K1Q13233 1512 aa20.07■□□□□ 0.8
CSHL1-201ENST00000259003 PTPN23Q9H3S7 1636 aa20.07■□□□□ 0.8
CSHL1-201ENST00000259003 RRP7BPQ9NSQ0 103 aa20.07■□□□□ 0.8
CSHL1-201ENST00000259003 ABCC5O15440 1437 aa20.07■□□□□ 0.8
CSHL1-201ENST00000259003 SYNMO15061 1565 aa20.07■□□□□ 0.8
CSHL1-201ENST00000259003 PRDM15P57071 1507 aaPredicted RBP20.07■□□□□ 0.8
CSHL1-201ENST00000259003 KIF15Q9NS87 1388 aa20.06■□□□□ 0.8
CSHL1-201ENST00000259003 SCAF11Q99590 1463 aaKnown RBP20.05■□□□□ 0.8
CSHL1-201ENST00000259003 ARHGAP23Q9P227 1491 aa20.05■□□□□ 0.8
CSHL1-201ENST00000259003 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.04■□□□□ 0.8
CSHL1-201ENST00000259003 SLIT1O75093 1534 aa20.03■□□□□ 0.8
CSHL1-201ENST00000259003 TXNDC2Q86VQ3 553 aa20.02■□□□□ 0.8
CSHL1-201ENST00000259003 MYO5BQ9ULV0 1848 aa20.01■□□□□ 0.79
CSHL1-201ENST00000259003 DAPK1P53355 1430 aa20■□□□□ 0.79
CSHL1-201ENST00000259003 ARHGAP31Q2M1Z3 1444 aa20■□□□□ 0.79
CSHL1-201ENST00000259003 CHIC2Q9UKJ5 165 aa19.99■□□□□ 0.79
CSHL1-201ENST00000259003 ERBINQ96RT1 1412 aa19.98■□□□□ 0.79
CSHL1-201ENST00000259003 RBM33Q96EV2 1170 aaKnown RBP19.96■□□□□ 0.79
CSHL1-201ENST00000259003 PHF23Q9BUL5 403 aaPredicted RBP19.96■□□□□ 0.79
CSHL1-201ENST00000259003 IDI1Q13907 227 aa19.95■□□□□ 0.78
CSHL1-201ENST00000259003 RGS17Q9UGC6 210 aaPredicted RBP19.95■□□□□ 0.78
CSHL1-201ENST00000259003 TMEM2Q9UHN6 1383 aa19.94■□□□□ 0.78
CSHL1-201ENST00000259003 FGD6Q6ZV73 1430 aa19.93■□□□□ 0.78
CSHL1-201ENST00000259003 TET3O43151 1660 aa19.92■□□□□ 0.78
CSHL1-201ENST00000259003 EFCAB6Q5THR3 1501 aa19.92■□□□□ 0.78
CSHL1-201ENST00000259003 KDM5AP29375 1690 aaKnown RBP19.91■□□□□ 0.78
CSHL1-201ENST00000259003 SLC26A8Q96RN1 970 aa19.91■□□□□ 0.78
CSHL1-201ENST00000259003 EID1Q9Y6B2 187 aa19.91■□□□□ 0.78
CSHL1-201ENST00000259003 LMTK2Q8IWU2 1503 aa19.91■□□□□ 0.78
CSHL1-201ENST00000259003 STAG3Q9UJ98 1225 aa19.9■□□□□ 0.78
CSHL1-201ENST00000259003 ROBO1Q9Y6N7 1651 aa19.88■□□□□ 0.77
CSHL1-201ENST00000259003 TMEM94Q12767 1356 aa19.88■□□□□ 0.77
CSHL1-201ENST00000259003 NOS1P29475 1434 aa19.87■□□□□ 0.77
CSHL1-201ENST00000259003 KANK1Q14678 1352 aa19.87■□□□□ 0.77
CSHL1-201ENST00000259003 GCC2Q8IWJ2 1684 aa19.86■□□□□ 0.77
CSHL1-201ENST00000259003 ADGRB3O60242 1522 aa19.86■□□□□ 0.77
CSHL1-201ENST00000259003 ANKRD30AQ9BXX3 1397 aa19.85■□□□□ 0.77
CSHL1-201ENST00000259003 CHD2O14647 1828 aaKnown RBP19.84■□□□□ 0.77
CSHL1-201ENST00000259003 KCNA6P17658 529 aa19.84■□□□□ 0.77
CSHL1-201ENST00000259003 APLP2Q06481 763 aa19.83■□□□□ 0.77
CSHL1-201ENST00000259003 FAM135BQ49AJ0 1406 aa19.83■□□□□ 0.76
CSHL1-201ENST00000259003 NWD1Q149M9 1564 aa19.83■□□□□ 0.76
CSHL1-201ENST00000259003 PROSER2Q86WR7 435 aaPredicted RBP19.82■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms