RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 BCORL1Q5H9F3 1711 aa18.18■□□□□ 0.5
THSD1-201ENST00000258613 FKBP8Q14318 412 aa18.17■□□□□ 0.5
THSD1-201ENST00000258613 PLA2R1Q13018 1463 aa18.16■□□□□ 0.5
THSD1-201ENST00000258613 SPAG9O60271 1321 aaKnown RBP18.15■□□□□ 0.5
THSD1-201ENST00000258613 KDM5DQ9BY66 1539 aa18.14■□□□□ 0.49
THSD1-201ENST00000258613 MRS2Q9HD23 443 aa18.14■□□□□ 0.49
THSD1-201ENST00000258613 CCDC144AA2RUR9 1427 aa18.14■□□□□ 0.49
THSD1-201ENST00000258613 UHRF1BP1LA0JNW5 1464 aa18.13■□□□□ 0.49
THSD1-201ENST00000258613 OSCARQ8IYS5 282 aa18.11■□□□□ 0.49
THSD1-201ENST00000258613 ROCK2O75116 1388 aaKnown RBP18.1■□□□□ 0.49
THSD1-201ENST00000258613 IRX6P78412 446 aaPredicted RBP18.09■□□□□ 0.49
THSD1-201ENST00000258613 ABCC1P33527 1531 aa18.09■□□□□ 0.49
THSD1-201ENST00000258613 KDM5CP41229 1560 aa18.08■□□□□ 0.49
THSD1-201ENST00000258613 WDR7Q9Y4E6 1490 aa18.08■□□□□ 0.48
THSD1-201ENST00000258613 KIF3BO15066 747 aa18.07■□□□□ 0.48
THSD1-201ENST00000258613 SCAPERQ9BY12 1400 aa18.07■□□□□ 0.48
THSD1-201ENST00000258613 MAST1Q9Y2H9 1570 aa18.07■□□□□ 0.48
THSD1-201ENST00000258613 UHRF1BP1Q6BDS2 1440 aa18.06■□□□□ 0.48
THSD1-201ENST00000258613 ASXL2Q76L83 1435 aa18.06■□□□□ 0.48
THSD1-201ENST00000258613 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
THSD1-201ENST00000258613 FANCAO15360 1455 aa18.06■□□□□ 0.48
THSD1-201ENST00000258613 DUOX2Q9NRD8 1548 aa18.05■□□□□ 0.48
THSD1-201ENST00000258613 DHX29Q7Z478 1369 aaKnown RBP18.05■□□□□ 0.48
THSD1-201ENST00000258613 UNC13BO14795 1591 aa18.04■□□□□ 0.48
THSD1-201ENST00000258613 PLXNC1O60486 1568 aa18.04■□□□□ 0.48
THSD1-201ENST00000258613 A2MP01023 1474 aa18.04■□□□□ 0.48
THSD1-201ENST00000258613 PRAG1Q86YV5 1406 aa18.01■□□□□ 0.47
THSD1-201ENST00000258613 NPM1P06748 294 aaKnown RBP eCLIP18.01■□□□□ 0.47
THSD1-201ENST00000258613 ERBINQ96RT1 1412 aa18■□□□□ 0.47
THSD1-201ENST00000258613 ADGRL1O94910 1474 aa18■□□□□ 0.47
THSD1-201ENST00000258613 IQGAP3Q86VI3 1631 aa18■□□□□ 0.47
THSD1-201ENST00000258613 POLR1AO95602 1720 aaPredicted RBP17.99■□□□□ 0.47
THSD1-201ENST00000258613 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
THSD1-201ENST00000258613 NEFLP07196 543 aa17.96■□□□□ 0.47
THSD1-201ENST00000258613 CFAP65Q6ZU64 1925 aaKnown RBP17.96■□□□□ 0.47
THSD1-201ENST00000258613 SENP3Q9H4L4 574 aaPredicted RBP17.94■□□□□ 0.46
THSD1-201ENST00000258613 E9PCH4 1651 aa17.94■□□□□ 0.46
THSD1-201ENST00000258613 MAGI2Q86UL8 1455 aa17.93■□□□□ 0.46
THSD1-201ENST00000258613 ATP7AQ04656 1500 aa17.93■□□□□ 0.46
THSD1-201ENST00000258613 TRPM1Q7Z4N2 1603 aa17.93■□□□□ 0.46
THSD1-201ENST00000258613 RAPGEF3O95398 923 aa17.93■□□□□ 0.46
THSD1-201ENST00000258613 DISP3Q9P2K9 1392 aa17.93■□□□□ 0.46
THSD1-201ENST00000258613 GGT6Q6P531 493 aa17.93■□□□□ 0.46
THSD1-201ENST00000258613 ABCA9Q8IUA7 1624 aa17.92■□□□□ 0.46
THSD1-201ENST00000258613 TESK2Q96S53 571 aa17.92■□□□□ 0.46
THSD1-201ENST00000258613 CYB5RLQ6IPT4 315 aa17.91■□□□□ 0.46
THSD1-201ENST00000258613 UGGT1Q9NYU2 1555 aa17.91■□□□□ 0.46
THSD1-201ENST00000258613 ATP10AO60312 1499 aa17.91■□□□□ 0.46
THSD1-201ENST00000258613 CC2D1BQ5T0F9 858 aaKnown RBP17.91■□□□□ 0.46
THSD1-201ENST00000258613 RTEL1-TNFRSF6BF6WH68 1400 aa17.9■□□□□ 0.46
THSD1-201ENST00000258613 TMC1Q8TDI8 760 aa17.9■□□□□ 0.46
THSD1-201ENST00000258613 SALL2Q9Y467 1007 aaPredicted RBP17.9■□□□□ 0.46
THSD1-201ENST00000258613 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
THSD1-201ENST00000258613 CD109Q6YHK3 1445 aa17.88■□□□□ 0.45
THSD1-201ENST00000258613 ARID4BQ4LE39 1312 aaPredicted RBP17.86■□□□□ 0.45
THSD1-201ENST00000258613 PANK3Q9H999 370 aa17.86■□□□□ 0.45
THSD1-201ENST00000258613 ARAP3Q8WWN8 1544 aa17.86■□□□□ 0.45
THSD1-201ENST00000258613 INO80Q9ULG1 1556 aaPredicted RBP17.85■□□□□ 0.45
THSD1-201ENST00000258613 PNISRQ8TF01 805 aaKnown RBP17.85■□□□□ 0.45
THSD1-201ENST00000258613 KANK1Q14678 1352 aa17.84■□□□□ 0.45
THSD1-201ENST00000258613 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
THSD1-201ENST00000258613 CFAP70Q5T0N1 1121 aa17.84■□□□□ 0.45
THSD1-201ENST00000258613 NUTM2DQ5VT03 806 aaPredicted RBP17.84■□□□□ 0.45
THSD1-201ENST00000258613 TSHZ2Q9NRE2 1034 aa17.84■□□□□ 0.45
THSD1-201ENST00000258613 KIDINS220Q9ULH0 1771 aa17.84■□□□□ 0.45
THSD1-201ENST00000258613 GPRASP1Q5JY77 1395 aa17.84■□□□□ 0.45
THSD1-201ENST00000258613 PER1O15534 1290 aaPredicted RBP17.83■□□□□ 0.44
THSD1-201ENST00000258613 ZBED9Q6R2W3 1325 aa17.82■□□□□ 0.44
THSD1-201ENST00000258613 ADGRF5Q8IZF2 1346 aa17.82■□□□□ 0.44
THSD1-201ENST00000258613 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
THSD1-201ENST00000258613 TMF1P82094 1093 aa17.79■□□□□ 0.44
THSD1-201ENST00000258613 PRDM15P57071 1507 aaPredicted RBP17.79■□□□□ 0.44
THSD1-201ENST00000258613 PTPRTO14522 1441 aa17.79■□□□□ 0.44
THSD1-201ENST00000258613 MROH1Q8NDA8 1641 aa17.79■□□□□ 0.44
THSD1-201ENST00000258613 TRPM2O94759 1503 aa17.79■□□□□ 0.44
THSD1-201ENST00000258613 DEPDC5O75140 1603 aa17.79■□□□□ 0.44
THSD1-201ENST00000258613 MYBBP1AQ9BQG0 1328 aaKnown RBP17.77■□□□□ 0.44
THSD1-201ENST00000258613 ZNF518AQ6AHZ1 1483 aa17.77■□□□□ 0.44
THSD1-201ENST00000258613 COL17A1Q9UMD9 1497 aaPredicted RBP17.77■□□□□ 0.43
THSD1-201ENST00000258613 TET3O43151 1660 aa17.77■□□□□ 0.43
THSD1-201ENST00000258613 MADDQ8WXG6 1647 aa17.75■□□□□ 0.43
THSD1-201ENST00000258613 WASHC2CQ9Y4E1 1318 aa17.75■□□□□ 0.43
THSD1-201ENST00000258613 CEP152O94986 1710 aa17.75■□□□□ 0.43
THSD1-201ENST00000258613 KTN1Q86UP2 1357 aaKnown RBP17.74■□□□□ 0.43
THSD1-201ENST00000258613 POGZQ7Z3K3 1410 aa17.74■□□□□ 0.43
THSD1-201ENST00000258613 RALBP1Q15311 655 aa17.74■□□□□ 0.43
THSD1-201ENST00000258613 VWDEQ8N2E2 1590 aa17.74■□□□□ 0.43
THSD1-201ENST00000258613 TMEM132EQ6IEE7 984 aa17.73■□□□□ 0.43
THSD1-201ENST00000258613 PPRC1Q5VV67 1664 aaKnown RBP17.73■□□□□ 0.43
THSD1-201ENST00000258613 EIF2AK4Q9P2K8 1649 aaKnown RBP17.71■□□□□ 0.43
THSD1-201ENST00000258613 FRMPD1Q5SYB0 1578 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 B4GALNT3Q6L9W6 998 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 ANP32EQ9BTT0 268 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 PARD3Q8TEW0 1356 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 ERICH6Q7L0X2 663 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 NLRP13Q86W25 1043 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 NPATQ14207 1427 aa17.7■□□□□ 0.42
THSD1-201ENST00000258613 TRAK1Q9UPV9 953 aa17.69■□□□□ 0.42
THSD1-201ENST00000258613 NOS1P29475 1434 aa17.68■□□□□ 0.42
THSD1-201ENST00000258613 RNF17Q9BXT8 1623 aaKnown RBP17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms