RNA–Protein interactions for RNA: ENST00000255465.6

CCNA1-201, Transcript of cyclin A1, humanhuman

TSL 1 (best) BASIC

Gene CCNA1, Length 1,879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1-201ENST00000255465 KDM4FA0A1W2PPD8 638 aa16.35■□□□□ 0.21
CCNA1-201ENST00000255465 ARID4BQ4LE39 1312 aaPredicted RBP16.35■□□□□ 0.21
CCNA1-201ENST00000255465 BCORL1Q5H9F3 1711 aa16.34■□□□□ 0.21
CCNA1-201ENST00000255465 REREQ9P2R6 1566 aa16.34■□□□□ 0.21
CCNA1-201ENST00000255465 RTEL1-TNFRSF6BF6WH68 1400 aa16.34■□□□□ 0.21
CCNA1-201ENST00000255465 CROCC2H7BZ55 1655 aa16.33■□□□□ 0.2
CCNA1-201ENST00000255465 ADGBQ8N7X0 1667 aa16.33■□□□□ 0.2
CCNA1-201ENST00000255465 RSPH6AQ9H0K4 717 aa16.33■□□□□ 0.2
CCNA1-201ENST00000255465 DNMT1P26358 1616 aaKnown RBP16.33■□□□□ 0.2
CCNA1-201ENST00000255465 TSPY4P0CV99 314 aa16.32■□□□□ 0.2
CCNA1-201ENST00000255465 TSPY10P0CW01 314 aa16.32■□□□□ 0.2
CCNA1-201ENST00000255465 MAST1Q9Y2H9 1570 aa16.32■□□□□ 0.2
CCNA1-201ENST00000255465 ADAMTSL3P82987 1691 aa16.31■□□□□ 0.2
CCNA1-201ENST00000255465 FAM50AQ14320 339 aaKnown RBP16.3■□□□□ 0.2
CCNA1-201ENST00000255465 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.3■□□□□ 0.2
CCNA1-201ENST00000255465 ABCC5O15440 1437 aa16.29■□□□□ 0.2
CCNA1-201ENST00000255465 ILDR1Q86SU0 546 aaPredicted RBP16.29■□□□□ 0.2
CCNA1-201ENST00000255465 DAPK1P53355 1430 aa16.29■□□□□ 0.2
CCNA1-201ENST00000255465 RTL5Q5HYW3 569 aaPredicted RBP16.29■□□□□ 0.2
CCNA1-201ENST00000255465 AGLP35573 1532 aa16.28■□□□□ 0.2
CCNA1-201ENST00000255465 A2MP01023 1474 aa16.28■□□□□ 0.2
CCNA1-201ENST00000255465 NOP58Q9Y2X3 529 aaKnown RBP16.28■□□□□ 0.2
CCNA1-201ENST00000255465 PLXNC1O60486 1568 aa16.28■□□□□ 0.2
CCNA1-201ENST00000255465 SHANK2Q9UPX8 1470 aa16.26■□□□□ 0.19
CCNA1-201ENST00000255465 MADDQ8WXG6 1647 aa16.26■□□□□ 0.19
CCNA1-201ENST00000255465 MLECQ14165 292 aa16.26■□□□□ 0.19
CCNA1-201ENST00000255465 IL27Q8NEV9 243 aa16.26■□□□□ 0.19
CCNA1-201ENST00000255465 FER1L4A9Z1Z3 1794 aa16.25■□□□□ 0.19
CCNA1-201ENST00000255465 BCANQ96GW7 911 aa16.25■□□□□ 0.19
CCNA1-201ENST00000255465 DHX29Q7Z478 1369 aaKnown RBP16.24■□□□□ 0.19
CCNA1-201ENST00000255465 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
CCNA1-201ENST00000255465 RRBP1Q9P2E9 1410 aaKnown RBP16.23■□□□□ 0.19
CCNA1-201ENST00000255465 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.22■□□□□ 0.19
CCNA1-201ENST00000255465 CHIC2Q9UKJ5 165 aa16.21■□□□□ 0.19
CCNA1-201ENST00000255465 USP35Q9P2H5 1018 aa16.2■□□□□ 0.18
CCNA1-201ENST00000255465 WASHC2AQ641Q2 1341 aa16.19■□□□□ 0.18
CCNA1-201ENST00000255465 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
CCNA1-201ENST00000255465 DUOX2Q9NRD8 1548 aa16.19■□□□□ 0.18
CCNA1-201ENST00000255465 PTPRKQ15262 1439 aa16.18■□□□□ 0.18
CCNA1-201ENST00000255465 RRP7BPQ9NSQ0 103 aa16.18■□□□□ 0.18
CCNA1-201ENST00000255465 ADGRL2O95490 1459 aa16.18■□□□□ 0.18
CCNA1-201ENST00000255465 PTPRMP28827 1452 aa16.18■□□□□ 0.18
CCNA1-201ENST00000255465 ANKRD30AQ9BXX3 1397 aa16.18■□□□□ 0.18
CCNA1-201ENST00000255465 NCOA1Q15788 1441 aa16.18■□□□□ 0.18
CCNA1-201ENST00000255465 KIF15Q9NS87 1388 aa16.17■□□□□ 0.18
CCNA1-201ENST00000255465 EIF2AK4Q9P2K8 1649 aaKnown RBP16.17■□□□□ 0.18
CCNA1-201ENST00000255465 KIF3BO15066 747 aa16.16■□□□□ 0.18
CCNA1-201ENST00000255465 ITGAEP38570 1179 aa16.16■□□□□ 0.18
CCNA1-201ENST00000255465 GGT6Q6P531 493 aa16.16■□□□□ 0.18
CCNA1-201ENST00000255465 ZMYND15Q9H091 742 aa16.14■□□□□ 0.17
CCNA1-201ENST00000255465 CLTCQ00610 1675 aaKnown RBP16.14■□□□□ 0.17
CCNA1-201ENST00000255465 RNF17Q9BXT8 1623 aaKnown RBP16.13■□□□□ 0.17
CCNA1-201ENST00000255465 MROH2AA6NES4 1674 aa16.12■□□□□ 0.17
CCNA1-201ENST00000255465 C3P01024 1663 aa16.12■□□□□ 0.17
CCNA1-201ENST00000255465 ERBINQ96RT1 1412 aa16.12■□□□□ 0.17
CCNA1-201ENST00000255465 ESF1Q9H501 851 aaKnown RBP16.12■□□□□ 0.17
CCNA1-201ENST00000255465 CNTLNQ9NXG0 1405 aa16.11■□□□□ 0.17
CCNA1-201ENST00000255465 ROCK1Q13464 1354 aa16.11■□□□□ 0.17
CCNA1-201ENST00000255465 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
CCNA1-201ENST00000255465 PLPPR3Q6T4P5 718 aa16.1■□□□□ 0.17
CCNA1-201ENST00000255465 MROH1Q8NDA8 1641 aa16.09■□□□□ 0.17
CCNA1-201ENST00000255465 CEBPAP49715 358 aaPredicted RBP16.08■□□□□ 0.17
CCNA1-201ENST00000255465 DEPDC5O75140 1603 aa16.08■□□□□ 0.16
CCNA1-201ENST00000255465 SETD1BQ9UPS6 1966 aaKnown RBP16.08■□□□□ 0.16
CCNA1-201ENST00000255465 ANKRD50Q9ULJ7 1429 aa16.07■□□□□ 0.16
CCNA1-201ENST00000255465 FAM135AQ9P2D6 1515 aa16.07■□□□□ 0.16
CCNA1-201ENST00000255465 KDM5DQ9BY66 1539 aa16.07■□□□□ 0.16
CCNA1-201ENST00000255465 CEP152O94986 1710 aa16.06■□□□□ 0.16
CCNA1-201ENST00000255465 NBR1Q14596 966 aa16.06■□□□□ 0.16
CCNA1-201ENST00000255465 ZC3H13Q5T200 1668 aaKnown RBP16.06■□□□□ 0.16
CCNA1-201ENST00000255465 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
CCNA1-201ENST00000255465 PRDM15P57071 1507 aaPredicted RBP16.06■□□□□ 0.16
CCNA1-201ENST00000255465 RTN4Q9NQC3 1192 aaKnown RBP16.05■□□□□ 0.16
CCNA1-201ENST00000255465 CFAP65Q6ZU64 1925 aaKnown RBP16.03■□□□□ 0.16
CCNA1-201ENST00000255465 ABCC3O15438 1527 aa16.03■□□□□ 0.16
CCNA1-201ENST00000255465 GCC2Q8IWJ2 1684 aa16.03■□□□□ 0.16
CCNA1-201ENST00000255465 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.02■□□□□ 0.16
CCNA1-201ENST00000255465 FGD1P98174 961 aa16.01■□□□□ 0.15
CCNA1-201ENST00000255465 FAM43AQ8N2R8 423 aa16.01■□□□□ 0.15
CCNA1-201ENST00000255465 PDE4CQ08493 712 aa16.01■□□□□ 0.15
CCNA1-201ENST00000255465 VSIG10Q8N0Z9 540 aa16.01■□□□□ 0.15
CCNA1-201ENST00000255465 CAMSAP1Q5T5Y3 1602 aa16.01■□□□□ 0.15
CCNA1-201ENST00000255465 PREX1Q8TCU6 1659 aa16■□□□□ 0.15
CCNA1-201ENST00000255465 UNC13BO14795 1591 aa16■□□□□ 0.15
CCNA1-201ENST00000255465 VWDEQ8N2E2 1590 aa16■□□□□ 0.15
CCNA1-201ENST00000255465 NAIPQ13075 1403 aa16■□□□□ 0.15
CCNA1-201ENST00000255465 KANK1Q14678 1352 aa15.99■□□□□ 0.15
CCNA1-201ENST00000255465 CCER2I3L3R5 266 aa15.99■□□□□ 0.15
CCNA1-201ENST00000255465 IPO9Q96P70 1041 aaKnown RBP15.99■□□□□ 0.15
CCNA1-201ENST00000255465 HFM1A2PYH4 1435 aa15.98■□□□□ 0.15
CCNA1-201ENST00000255465 NPATQ14207 1427 aa15.98■□□□□ 0.15
CCNA1-201ENST00000255465 PZPP20742 1482 aa15.98■□□□□ 0.15
CCNA1-201ENST00000255465 PPP4R2Q9NY27 417 aa15.97■□□□□ 0.15
CCNA1-201ENST00000255465 RRP9O43818 475 aaKnown RBP15.96■□□□□ 0.15
CCNA1-201ENST00000255465 LMTK3Q96Q04 1460 aa15.96■□□□□ 0.15
CCNA1-201ENST00000255465 LMTK2Q8IWU2 1503 aa15.96■□□□□ 0.15
CCNA1-201ENST00000255465 ANP32AP39687 249 aaKnown RBP15.95■□□□□ 0.14
CCNA1-201ENST00000255465 FBXO31Q5XUX0 539 aaPredicted RBP15.95■□□□□ 0.14
CCNA1-201ENST00000255465 PDIA4P13667 645 aaKnown RBP15.95■□□□□ 0.14
CCNA1-201ENST00000255465 AAMPQ13685 434 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms