RNA–Protein interactions for RNA: ENST00000254644.12

MRPL35-201, Transcript of mitochondrial ribosomal protein L35, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene MRPL35, Length 1,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL35-201ENST00000254644 KIF3BO15066 747 aa20.71■□□□□ 0.91
MRPL35-201ENST00000254644 KDM5DQ9BY66 1539 aa20.7■□□□□ 0.9
MRPL35-201ENST00000254644 DNMT1P26358 1616 aaKnown RBP20.7■□□□□ 0.9
MRPL35-201ENST00000254644 MIA2Q96PC5 1412 aa20.69■□□□□ 0.9
MRPL35-201ENST00000254644 A2ML1A8K2U0 1454 aa20.69■□□□□ 0.9
MRPL35-201ENST00000254644 TSPY4P0CV99 314 aa20.68■□□□□ 0.9
MRPL35-201ENST00000254644 TSPY10P0CW01 314 aa20.68■□□□□ 0.9
MRPL35-201ENST00000254644 PKD2Q13563 968 aa20.68■□□□□ 0.9
MRPL35-201ENST00000254644 PZPP20742 1482 aa20.68■□□□□ 0.9
MRPL35-201ENST00000254644 IQSEC2Q5JU85 1478 aa20.68■□□□□ 0.9
MRPL35-201ENST00000254644 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
MRPL35-201ENST00000254644 MYOM3Q5VTT5 1437 aa20.67■□□□□ 0.9
MRPL35-201ENST00000254644 RNF17Q9BXT8 1623 aaKnown RBP20.67■□□□□ 0.9
MRPL35-201ENST00000254644 EIF2AK4Q9P2K8 1649 aaKnown RBP20.64■□□□□ 0.9
MRPL35-201ENST00000254644 FBXO31Q5XUX0 539 aaPredicted RBP20.63■□□□□ 0.89
MRPL35-201ENST00000254644 POLR1AO95602 1720 aaPredicted RBP20.62■□□□□ 0.89
MRPL35-201ENST00000254644 WASHC2CQ9Y4E1 1318 aa20.62■□□□□ 0.89
MRPL35-201ENST00000254644 TNRQ92752 1358 aa20.61■□□□□ 0.89
MRPL35-201ENST00000254644 ZC3H13Q5T200 1668 aaKnown RBP20.61■□□□□ 0.89
MRPL35-201ENST00000254644 MROH1Q8NDA8 1641 aa20.6■□□□□ 0.89
MRPL35-201ENST00000254644 ABCC3O15438 1527 aa20.58■□□□□ 0.89
MRPL35-201ENST00000254644 NEURL4Q96JN8 1562 aa20.58■□□□□ 0.88
MRPL35-201ENST00000254644 CROCC2H7BZ55 1655 aa20.58■□□□□ 0.88
MRPL35-201ENST00000254644 ZNF335Q9H4Z2 1342 aaPredicted RBP20.57■□□□□ 0.88
MRPL35-201ENST00000254644 CFAP65Q6ZU64 1925 aaKnown RBP20.57■□□□□ 0.88
MRPL35-201ENST00000254644 NLRP1Q9C000 1473 aa20.56■□□□□ 0.88
MRPL35-201ENST00000254644 PTPN23Q9H3S7 1636 aa20.56■□□□□ 0.88
MRPL35-201ENST00000254644 SPATA31D1Q6ZQQ2 1576 aa20.55■□□□□ 0.88
MRPL35-201ENST00000254644 DUOX2Q9NRD8 1548 aa20.55■□□□□ 0.88
MRPL35-201ENST00000254644 CEP152O94986 1710 aa20.54■□□□□ 0.88
MRPL35-201ENST00000254644 SHANK2Q9UPX8 1470 aa20.54■□□□□ 0.88
MRPL35-201ENST00000254644 ABCC5O15440 1437 aa20.53■□□□□ 0.88
MRPL35-201ENST00000254644 UGGT1Q9NYU2 1555 aa20.52■□□□□ 0.88
MRPL35-201ENST00000254644 DEPDC5O75140 1603 aa20.52■□□□□ 0.88
MRPL35-201ENST00000254644 THEMISQ8N1K5 641 aaPredicted RBP20.5■□□□□ 0.87
MRPL35-201ENST00000254644 MED14O60244 1454 aa20.5■□□□□ 0.87
MRPL35-201ENST00000254644 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.49■□□□□ 0.87
MRPL35-201ENST00000254644 ERVK-7P63135 1459 aa20.49■□□□□ 0.87
MRPL35-201ENST00000254644 PRDM15P57071 1507 aaPredicted RBP20.48■□□□□ 0.87
MRPL35-201ENST00000254644 KIF15Q9NS87 1388 aa20.47■□□□□ 0.87
MRPL35-201ENST00000254644 DAPK1P53355 1430 aa20.47■□□□□ 0.87
MRPL35-201ENST00000254644 FGD6Q6ZV73 1430 aa20.47■□□□□ 0.87
MRPL35-201ENST00000254644 ERBINQ96RT1 1412 aa20.47■□□□□ 0.87
MRPL35-201ENST00000254644 APLP2Q06481 763 aa20.47■□□□□ 0.87
MRPL35-201ENST00000254644 ANKLE2Q86XL3 938 aa20.47■□□□□ 0.87
MRPL35-201ENST00000254644 UBR1Q8IWV7 1749 aa20.46■□□□□ 0.87
MRPL35-201ENST00000254644 ARHGAP31Q2M1Z3 1444 aa20.45■□□□□ 0.86
MRPL35-201ENST00000254644 VWDEQ8N2E2 1590 aa20.45■□□□□ 0.86
MRPL35-201ENST00000254644 CPS1P31327 1500 aa20.44■□□□□ 0.86
MRPL35-201ENST00000254644 IQGAP1P46940 1657 aa20.44■□□□□ 0.86
MRPL35-201ENST00000254644 RRP7BPQ9NSQ0 103 aa20.42■□□□□ 0.86
MRPL35-201ENST00000254644 NPHP4O75161 1426 aaPredicted RBP20.42■□□□□ 0.86
MRPL35-201ENST00000254644 STRCP1A6NGW2 1772 aa20.4■□□□□ 0.86
MRPL35-201ENST00000254644 UBAP1LF5GYI3 381 aa20.4■□□□□ 0.86
MRPL35-201ENST00000254644 LMTK2Q8IWU2 1503 aa20.37■□□□□ 0.85
MRPL35-201ENST00000254644 ADGRL2O95490 1459 aa20.37■□□□□ 0.85
MRPL35-201ENST00000254644 ARHGAP23Q9P227 1491 aa20.37■□□□□ 0.85
MRPL35-201ENST00000254644 ANKRD30AQ9BXX3 1397 aa20.36■□□□□ 0.85
MRPL35-201ENST00000254644 DISP3Q9P2K9 1392 aa20.36■□□□□ 0.85
MRPL35-201ENST00000254644 SLIT1O75093 1534 aa20.36■□□□□ 0.85
MRPL35-201ENST00000254644 KDM5AP29375 1690 aaKnown RBP20.35■□□□□ 0.85
MRPL35-201ENST00000254644 PIK3C2BO00750 1634 aa20.34■□□□□ 0.85
MRPL35-201ENST00000254644 ALKQ9UM73 1620 aa20.33■□□□□ 0.84
MRPL35-201ENST00000254644 CHIC2Q9UKJ5 165 aa20.32■□□□□ 0.84
MRPL35-201ENST00000254644 KANK1Q14678 1352 aa20.32■□□□□ 0.84
MRPL35-201ENST00000254644 SCAF11Q99590 1463 aaKnown RBP20.31■□□□□ 0.84
MRPL35-201ENST00000254644 LTKP29376 864 aa20.31■□□□□ 0.84
MRPL35-201ENST00000254644 ILDR2Q71H61 639 aa20.31■□□□□ 0.84
MRPL35-201ENST00000254644 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.3■□□□□ 0.84
MRPL35-201ENST00000254644 TOM1O60784 492 aa20.29■□□□□ 0.84
MRPL35-201ENST00000254644 SYNMO15061 1565 aa20.29■□□□□ 0.84
MRPL35-201ENST00000254644 EFCAB6Q5THR3 1501 aa20.28■□□□□ 0.84
MRPL35-201ENST00000254644 LRRC7Q96NW7 1537 aa20.28■□□□□ 0.84
MRPL35-201ENST00000254644 NOS1P29475 1434 aa20.27■□□□□ 0.84
MRPL35-201ENST00000254644 XIRP1Q702N8 1843 aaKnown RBP20.27■□□□□ 0.84
MRPL35-201ENST00000254644 TMEM2Q9UHN6 1383 aa20.25■□□□□ 0.83
MRPL35-201ENST00000254644 IDI1Q13907 227 aa20.25■□□□□ 0.83
MRPL35-201ENST00000254644 TXNDC2Q86VQ3 553 aa20.25■□□□□ 0.83
MRPL35-201ENST00000254644 ANKRD50Q9ULJ7 1429 aa20.24■□□□□ 0.83
MRPL35-201ENST00000254644 HSPA1LP34931 641 aa20.22■□□□□ 0.83
MRPL35-201ENST00000254644 FAM50AQ14320 339 aaKnown RBP20.22■□□□□ 0.83
MRPL35-201ENST00000254644 EID1Q9Y6B2 187 aa20.21■□□□□ 0.83
MRPL35-201ENST00000254644 RPRD2Q5VT52 1461 aaKnown RBP20.21■□□□□ 0.83
MRPL35-201ENST00000254644 TET3O43151 1660 aa20.21■□□□□ 0.83
MRPL35-201ENST00000254644 PIP4K2BP78356 416 aa20.2■□□□□ 0.82
MRPL35-201ENST00000254644 MYO5BQ9ULV0 1848 aa20.2■□□□□ 0.82
MRPL35-201ENST00000254644 GCC2Q8IWJ2 1684 aa20.19■□□□□ 0.82
MRPL35-201ENST00000254644 UNC13BO14795 1591 aa20.19■□□□□ 0.82
MRPL35-201ENST00000254644 ADGRB3O60242 1522 aa20.18■□□□□ 0.82
MRPL35-201ENST00000254644 SOCS7O14512 581 aa20.18■□□□□ 0.82
MRPL35-201ENST00000254644 SLC52A1Q9NWF4 448 aa20.18■□□□□ 0.82
MRPL35-201ENST00000254644 SCAF1Q9H7N4 1312 aaKnown RBP20.17■□□□□ 0.82
MRPL35-201ENST00000254644 STAG3Q9UJ98 1225 aa20.16■□□□□ 0.82
MRPL35-201ENST00000254644 ROCK1Q13464 1354 aa20.15■□□□□ 0.82
MRPL35-201ENST00000254644 E9PCH4 1651 aa20.13■□□□□ 0.81
MRPL35-201ENST00000254644 TMEM131LA2VDJ0 1609 aa20.13■□□□□ 0.81
MRPL35-201ENST00000254644 MED1Q15648 1581 aaPredicted RBP20.12■□□□□ 0.81
MRPL35-201ENST00000254644 IQGAP3Q86VI3 1631 aa20.12■□□□□ 0.81
MRPL35-201ENST00000254644 ZFYVE9O95405 1425 aa20.1■□□□□ 0.81
MRPL35-201ENST00000254644 NWD1Q149M9 1564 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms