RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 SOX12O15370 315 aa16.13■□□□□ 0.17
LIN28A-201ENST00000254231 ROCK2O75116 1388 aaKnown RBP16.12■□□□□ 0.17
LIN28A-201ENST00000254231 ROCK1Q13464 1354 aa16.12■□□□□ 0.17
LIN28A-201ENST00000254231 SAMD9LQ8IVG5 1584 aa16.12■□□□□ 0.17
LIN28A-201ENST00000254231 CC2D1BQ5T0F9 858 aaKnown RBP16.11■□□□□ 0.17
LIN28A-201ENST00000254231 CDC42BPAQ5VT25 1732 aa16.1■□□□□ 0.17
LIN28A-201ENST00000254231 CENPBP07199 599 aaPredicted RBP16.1■□□□□ 0.17
LIN28A-201ENST00000254231 YEATS2Q9ULM3 1422 aa16.1■□□□□ 0.17
LIN28A-201ENST00000254231 KIAA1107Q9UPP5 1409 aa16.09■□□□□ 0.17
LIN28A-201ENST00000254231 SHROOM2Q13796 1616 aa16.08■□□□□ 0.16
LIN28A-201ENST00000254231 RIMBP3CA6NJZ7 1639 aa16.06■□□□□ 0.16
LIN28A-201ENST00000254231 RIMBP3BA6NNM3 1639 aa16.06■□□□□ 0.16
LIN28A-201ENST00000254231 RIMBP3Q9UFD9 1639 aa16.06■□□□□ 0.16
LIN28A-201ENST00000254231 IDI1Q13907 227 aa16.06■□□□□ 0.16
LIN28A-201ENST00000254231 DNMT1P26358 1616 aaKnown RBP16.06■□□□□ 0.16
LIN28A-201ENST00000254231 SCAF1Q9H7N4 1312 aaKnown RBP16.06■□□□□ 0.16
LIN28A-201ENST00000254231 WASHC2AQ641Q2 1341 aa16.06■□□□□ 0.16
LIN28A-201ENST00000254231 PZPP20742 1482 aa16.04■□□□□ 0.16
LIN28A-201ENST00000254231 CDC42BPBQ9Y5S2 1711 aa16.04■□□□□ 0.16
LIN28A-201ENST00000254231 DENND4BO75064 1496 aaPredicted RBP16.04■□□□□ 0.16
LIN28A-201ENST00000254231 ITSN2Q9NZM3 1697 aa16.03■□□□□ 0.16
LIN28A-201ENST00000254231 ADGRF5Q8IZF2 1346 aa16.03■□□□□ 0.16
LIN28A-201ENST00000254231 MRS2Q9HD23 443 aa16.02■□□□□ 0.16
LIN28A-201ENST00000254231 ZBTB7CA1YPR0 619 aa16.02■□□□□ 0.15
LIN28A-201ENST00000254231 TIMELESSQ9UNS1 1208 aa16.02■□□□□ 0.15
LIN28A-201ENST00000254231 UHRF1BP1LA0JNW5 1464 aa16.01■□□□□ 0.15
LIN28A-201ENST00000254231 IRX6P78412 446 aaPredicted RBP16.01■□□□□ 0.15
LIN28A-201ENST00000254231 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
LIN28A-201ENST00000254231 USP47Q96K76 1375 aa16.01■□□□□ 0.15
LIN28A-201ENST00000254231 DHX29Q7Z478 1369 aaKnown RBP16.01■□□□□ 0.15
LIN28A-201ENST00000254231 PPM1GO15355 546 aaPredicted RBP16■□□□□ 0.15
LIN28A-201ENST00000254231 CCDC184Q52MB2 194 aa16■□□□□ 0.15
LIN28A-201ENST00000254231 SLC26A8Q96RN1 970 aa16■□□□□ 0.15
LIN28A-201ENST00000254231 GTF3C3Q9Y5Q9 886 aa16■□□□□ 0.15
LIN28A-201ENST00000254231 POGKQ9P215 609 aa16■□□□□ 0.15
LIN28A-201ENST00000254231 C14orf37Q86TY3 774 aa15.99■□□□□ 0.15
LIN28A-201ENST00000254231 MYO5CQ9NQX4 1742 aa15.98■□□□□ 0.15
LIN28A-201ENST00000254231 KIF7Q2M1P5 1343 aa15.97■□□□□ 0.15
LIN28A-201ENST00000254231 MINK1Q8N4C8 1332 aaPredicted RBP15.97■□□□□ 0.15
LIN28A-201ENST00000254231 DNAJC5Q9H3Z4 198 aa15.96■□□□□ 0.14
LIN28A-201ENST00000254231 SRPK2P78362 688 aaKnown RBP15.95■□□□□ 0.14
LIN28A-201ENST00000254231 FAM135AQ9P2D6 1515 aa15.95■□□□□ 0.14
LIN28A-201ENST00000254231 LMOD2Q6P5Q4 547 aa15.95■□□□□ 0.14
LIN28A-201ENST00000254231 A2MP01023 1474 aa15.94■□□□□ 0.14
LIN28A-201ENST00000254231 BCL11AQ9H165 835 aa15.94■□□□□ 0.14
LIN28A-201ENST00000254231 UGGT1Q9NYU2 1555 aa15.94■□□□□ 0.14
LIN28A-201ENST00000254231 PREX2Q70Z35 1606 aa15.93■□□□□ 0.14
LIN28A-201ENST00000254231 ZNF518AQ6AHZ1 1483 aa15.93■□□□□ 0.14
LIN28A-201ENST00000254231 RPRD2Q5VT52 1461 aaKnown RBP15.91■□□□□ 0.14
LIN28A-201ENST00000254231 PANK3Q9H999 370 aa15.91■□□□□ 0.14
LIN28A-201ENST00000254231 ERBINQ96RT1 1412 aa15.91■□□□□ 0.14
LIN28A-201ENST00000254231 NEUROD2Q15784 382 aa15.91■□□□□ 0.14
LIN28A-201ENST00000254231 WAPLQ7Z5K2 1190 aa15.91■□□□□ 0.14
LIN28A-201ENST00000254231 COL17A1Q9UMD9 1497 aaPredicted RBP15.91■□□□□ 0.14
LIN28A-201ENST00000254231 ATP7AQ04656 1500 aa15.9■□□□□ 0.14
LIN28A-201ENST00000254231 CABP2Q9NPB3 220 aa15.9■□□□□ 0.14
LIN28A-201ENST00000254231 TXNDC2Q86VQ3 553 aa15.89■□□□□ 0.13
LIN28A-201ENST00000254231 ABCC1P33527 1531 aa15.89■□□□□ 0.13
LIN28A-201ENST00000254231 ACIN1Q9UKV3 1341 aaKnown RBP15.88■□□□□ 0.13
LIN28A-201ENST00000254231 TMF1P82094 1093 aa15.88■□□□□ 0.13
LIN28A-201ENST00000254231 POGZQ7Z3K3 1410 aa15.88■□□□□ 0.13
LIN28A-201ENST00000254231 SLC24A1O60721 1099 aa15.87■□□□□ 0.13
LIN28A-201ENST00000254231 HSPA2P54652 639 aa15.87■□□□□ 0.13
LIN28A-201ENST00000254231 ADGRL2O95490 1459 aa15.86■□□□□ 0.13
LIN28A-201ENST00000254231 DUOX2Q9NRD8 1548 aa15.86■□□□□ 0.13
LIN28A-201ENST00000254231 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.85■□□□□ 0.13
LIN28A-201ENST00000254231 FBLN1P23142 703 aa15.85■□□□□ 0.13
LIN28A-201ENST00000254231 SLC12A5Q9H2X9 1139 aa15.85■□□□□ 0.13
LIN28A-201ENST00000254231 PELP1Q8IZL8 1130 aaKnown RBP15.84■□□□□ 0.13
LIN28A-201ENST00000254231 KNSTRNQ9Y448 316 aa15.84■□□□□ 0.13
LIN28A-201ENST00000254231 PLA2R1Q13018 1463 aa15.84■□□□□ 0.13
LIN28A-201ENST00000254231 VGFO15240 615 aaPredicted RBP15.84■□□□□ 0.13
LIN28A-201ENST00000254231 NUTM2GQ5VZR2 741 aa15.84■□□□□ 0.13
LIN28A-201ENST00000254231 NOS1P29475 1434 aa15.83■□□□□ 0.13
LIN28A-201ENST00000254231 PRAM1Q96QH2 718 aa15.83■□□□□ 0.12
LIN28A-201ENST00000254231 CCDC7Q96M83 1385 aa15.83■□□□□ 0.12
LIN28A-201ENST00000254231 SHANK2Q9UPX8 1470 aa15.82■□□□□ 0.12
LIN28A-201ENST00000254231 NCKAP5LQ9HCH0 1330 aa15.81■□□□□ 0.12
LIN28A-201ENST00000254231 GCC2Q8IWJ2 1684 aa15.8■□□□□ 0.12
LIN28A-201ENST00000254231 PRKRIP1Q9H875 184 aaPredicted RBP15.79■□□□□ 0.12
LIN28A-201ENST00000254231 NPATQ14207 1427 aa15.79■□□□□ 0.12
LIN28A-201ENST00000254231 ZFYVE16Q7Z3T8 1539 aa15.79■□□□□ 0.12
LIN28A-201ENST00000254231 XPCQ01831 940 aaPredicted RBP15.78■□□□□ 0.12
LIN28A-201ENST00000254231 ARHGEF5Q12774 1597 aa15.77■□□□□ 0.12
LIN28A-201ENST00000254231 PAK3O75914 559 aaPredicted RBP15.77■□□□□ 0.12
LIN28A-201ENST00000254231 ABCA9Q8IUA7 1624 aa15.76■□□□□ 0.11
LIN28A-201ENST00000254231 ZMYM3Q14202 1370 aa15.76■□□□□ 0.11
LIN28A-201ENST00000254231 RTEL1-TNFRSF6BF6WH68 1400 aa15.76■□□□□ 0.11
LIN28A-201ENST00000254231 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
LIN28A-201ENST00000254231 DISP3Q9P2K9 1392 aa15.75■□□□□ 0.11
LIN28A-201ENST00000254231 TEX14Q8IWB6 1497 aa15.75■□□□□ 0.11
LIN28A-201ENST00000254231 CCDC146Q8IYE0 955 aa15.74■□□□□ 0.11
LIN28A-201ENST00000254231 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
LIN28A-201ENST00000254231 SLC52A1Q9NWF4 448 aa15.74■□□□□ 0.11
LIN28A-201ENST00000254231 CENPJQ9HC77 1338 aaPredicted RBP15.74■□□□□ 0.11
LIN28A-201ENST00000254231 ADGBQ8N7X0 1667 aa15.74■□□□□ 0.11
LIN28A-201ENST00000254231 GGNBP2Q9H3C7 697 aa15.73■□□□□ 0.11
LIN28A-201ENST00000254231 ATP10AO60312 1499 aa15.72■□□□□ 0.11
LIN28A-201ENST00000254231 NEO1Q92859 1461 aa15.71■□□□□ 0.1
LIN28A-201ENST00000254231 FKBP8Q14318 412 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms