RNA–Protein interactions for RNA: ENST00000254109.9

CLUHP3-201, Transcript of clustered mitochondria homolog pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CLUHP3, Length 1,812 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLUHP3-201ENST00000254109 ERBINQ96RT1 1412 aa16.38■□□□□ 0.21
CLUHP3-201ENST00000254109 MIER1Q8N108 512 aa16.38■□□□□ 0.21
CLUHP3-201ENST00000254109 KIF3BO15066 747 aa16.35■□□□□ 0.21
CLUHP3-201ENST00000254109 ATP10AO60312 1499 aa16.35■□□□□ 0.21
CLUHP3-201ENST00000254109 ACIN1Q9UKV3 1341 aaKnown RBP16.35■□□□□ 0.21
CLUHP3-201ENST00000254109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.35■□□□□ 0.214e-8■□□□□ 11
CLUHP3-201ENST00000254109 ARHGEF40Q8TER5 1519 aa16.34■□□□□ 0.21
CLUHP3-201ENST00000254109 SIGLEC1Q9BZZ2 1709 aa16.33■□□□□ 0.21
CLUHP3-201ENST00000254109 EIF2AK4Q9P2K8 1649 aaKnown RBP16.31■□□□□ 0.2
CLUHP3-201ENST00000254109 NUP155O75694 1391 aa16.31■□□□□ 0.2
CLUHP3-201ENST00000254109 UNC13BO14795 1591 aa16.31■□□□□ 0.2
CLUHP3-201ENST00000254109 GGT6Q6P531 493 aa16.3■□□□□ 0.2
CLUHP3-201ENST00000254109 TONSLQ96HA7 1378 aa16.29■□□□□ 0.2
CLUHP3-201ENST00000254109 MPHOSPH9Q99550 1183 aa16.29■□□□□ 0.2
CLUHP3-201ENST00000254109 PZPP20742 1482 aa16.29■□□□□ 0.2
CLUHP3-201ENST00000254109 DEPDC5O75140 1603 aa16.28■□□□□ 0.2
CLUHP3-201ENST00000254109 MROH1Q8NDA8 1641 aa16.28■□□□□ 0.2
CLUHP3-201ENST00000254109 REREQ9P2R6 1566 aa16.28■□□□□ 0.2
CLUHP3-201ENST00000254109 PPP1R15AO75807 674 aaPredicted RBP16.27■□□□□ 0.2
CLUHP3-201ENST00000254109 SLC4A1APQ9BWU0 796 aaKnown RBP16.27■□□□□ 0.2
CLUHP3-201ENST00000254109 SCAF1Q9H7N4 1312 aaKnown RBP16.27■□□□□ 0.19
CLUHP3-201ENST00000254109 BCORL1Q5H9F3 1711 aa16.27■□□□□ 0.19
CLUHP3-201ENST00000254109 FOXD1Q16676 465 aa16.26■□□□□ 0.19
CLUHP3-201ENST00000254109 RNF17Q9BXT8 1623 aaKnown RBP16.26■□□□□ 0.19
CLUHP3-201ENST00000254109 KDM5DQ9BY66 1539 aa16.26■□□□□ 0.19
CLUHP3-201ENST00000254109 MLECQ14165 292 aa16.25■□□□□ 0.19
CLUHP3-201ENST00000254109 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
CLUHP3-201ENST00000254109 AGLP35573 1532 aa16.24■□□□□ 0.19
CLUHP3-201ENST00000254109 ARID4BQ4LE39 1312 aaPredicted RBP16.24■□□□□ 0.19
CLUHP3-201ENST00000254109 PRDM15P57071 1507 aaPredicted RBP16.24■□□□□ 0.19
CLUHP3-201ENST00000254109 IQGAP3Q86VI3 1631 aa16.24■□□□□ 0.19
CLUHP3-201ENST00000254109 YTHDC1Q96MU7 727 aaKnown RBP16.23■□□□□ 0.19
CLUHP3-201ENST00000254109 PKD2Q13563 968 aa16.22■□□□□ 0.19
CLUHP3-201ENST00000254109 VWDEQ8N2E2 1590 aa16.22■□□□□ 0.19
CLUHP3-201ENST00000254109 KANK1Q14678 1352 aa16.22■□□□□ 0.19
CLUHP3-201ENST00000254109 CEP152O94986 1710 aa16.21■□□□□ 0.19
CLUHP3-201ENST00000254109 WASHC2CQ9Y4E1 1318 aa16.19■□□□□ 0.18
CLUHP3-201ENST00000254109 ABCC3O15438 1527 aa16.17■□□□□ 0.18
CLUHP3-201ENST00000254109 TET3O43151 1660 aa16.16■□□□□ 0.18
CLUHP3-201ENST00000254109 E9PCH4 1651 aa16.16■□□□□ 0.18
CLUHP3-201ENST00000254109 CFAP65Q6ZU64 1925 aaKnown RBP16.15■□□□□ 0.18
CLUHP3-201ENST00000254109 LMTK2Q8IWU2 1503 aa16.14■□□□□ 0.18
CLUHP3-201ENST00000254109 CLTCQ00610 1675 aaKnown RBP16.13■□□□□ 0.17
CLUHP3-201ENST00000254109 ANKRD30BQ9BXX2 1392 aa16.13■□□□□ 0.17
CLUHP3-201ENST00000254109 CAMSAP1Q5T5Y3 1602 aa16.13■□□□□ 0.17
CLUHP3-201ENST00000254109 EFCAB6Q5THR3 1501 aa16.12■□□□□ 0.17
CLUHP3-201ENST00000254109 ZC3H13Q5T200 1668 aaKnown RBP16.12■□□□□ 0.17
CLUHP3-201ENST00000254109 PPP6R1Q9UPN7 881 aa16.11■□□□□ 0.17
CLUHP3-201ENST00000254109 NPATQ14207 1427 aa16.1■□□□□ 0.17
CLUHP3-201ENST00000254109 PLA2R1Q13018 1463 aa16.1■□□□□ 0.17
CLUHP3-201ENST00000254109 ESF1Q9H501 851 aaKnown RBP16.1■□□□□ 0.17
CLUHP3-201ENST00000254109 GTF3C3Q9Y5Q9 886 aa16.1■□□□□ 0.17
CLUHP3-201ENST00000254109 DDX10Q13206 875 aaKnown RBP16.08■□□□□ 0.17
CLUHP3-201ENST00000254109 FER1L4A9Z1Z3 1794 aa16.07■□□□□ 0.16
CLUHP3-201ENST00000254109 FBXO31Q5XUX0 539 aaPredicted RBP16.07■□□□□ 0.16
CLUHP3-201ENST00000254109 SPHKAPQ2M3C7 1700 aa16.06■□□□□ 0.16
CLUHP3-201ENST00000254109 ZMYM3Q14202 1370 aa16.06■□□□□ 0.16
CLUHP3-201ENST00000254109 HIRIP3Q9BW71 556 aaPredicted RBP16.05■□□□□ 0.16
CLUHP3-201ENST00000254109 ARHGAP31Q2M1Z3 1444 aa16.05■□□□□ 0.16
CLUHP3-201ENST00000254109 PTPRTO14522 1441 aa16.05■□□□□ 0.16
CLUHP3-201ENST00000254109 RPRD2Q5VT52 1461 aaKnown RBP16.05■□□□□ 0.16
CLUHP3-201ENST00000254109 CEBPAP49715 358 aaPredicted RBP16.03■□□□□ 0.16
CLUHP3-201ENST00000254109 PLPPR3Q6T4P5 718 aa16.03■□□□□ 0.16
CLUHP3-201ENST00000254109 MADDQ8WXG6 1647 aa16.03■□□□□ 0.16
CLUHP3-201ENST00000254109 ADAMTSL3P82987 1691 aa16.03■□□□□ 0.16
CLUHP3-201ENST00000254109 UGGT1Q9NYU2 1555 aa16.03■□□□□ 0.16
CLUHP3-201ENST00000254109 PREX1Q8TCU6 1659 aa16.02■□□□□ 0.16
CLUHP3-201ENST00000254109 TRPM2O94759 1503 aa16.02■□□□□ 0.16
CLUHP3-201ENST00000254109 CCDC144AA2RUR9 1427 aa16.02■□□□□ 0.16
CLUHP3-201ENST00000254109 CNTLNQ9NXG0 1405 aa16.02■□□□□ 0.16
CLUHP3-201ENST00000254109 L3MBTL2Q969R5 705 aa16.02■□□□□ 0.16
CLUHP3-201ENST00000254109 MROH2AA6NES4 1674 aa16.01■□□□□ 0.15
CLUHP3-201ENST00000254109 RIMS1Q86UR5 1692 aaKnown RBP16.01■□□□□ 0.15
CLUHP3-201ENST00000254109 NOS1P29475 1434 aa16.01■□□□□ 0.15
CLUHP3-201ENST00000254109 CLTCL1P53675 1640 aa16.01■□□□□ 0.15
CLUHP3-201ENST00000254109 SYNMO15061 1565 aa16.01■□□□□ 0.15
CLUHP3-201ENST00000254109 ERVK-7P63135 1459 aa16■□□□□ 0.15
CLUHP3-201ENST00000254109 C3P01024 1663 aa16■□□□□ 0.15
CLUHP3-201ENST00000254109 ANP32CO43423 234 aa15.97■□□□□ 0.15
CLUHP3-201ENST00000254109 EIF4G2P78344 907 aaKnown RBP eCLIP15.97■□□□□ 0.15
CLUHP3-201ENST00000254109 SPATA31D1Q6ZQQ2 1576 aa15.97■□□□□ 0.15
CLUHP3-201ENST00000254109 IDI1Q13907 227 aa15.96■□□□□ 0.14
CLUHP3-201ENST00000254109 RGL3Q3MIN7 710 aa15.96■□□□□ 0.14
CLUHP3-201ENST00000254109 CHGAP10645 457 aaKnown RBP15.94■□□□□ 0.14
CLUHP3-201ENST00000254109 HSPA5P11021 654 aaKnown RBP15.94■□□□□ 0.14
CLUHP3-201ENST00000254109 PIK3C2BO00750 1634 aa15.94■□□□□ 0.14
CLUHP3-201ENST00000254109 KIF1BO60333 1816 aa15.93■□□□□ 0.14
CLUHP3-201ENST00000254109 CCER2I3L3R5 266 aa15.92■□□□□ 0.14
CLUHP3-201ENST00000254109 TNRQ92752 1358 aa15.92■□□□□ 0.14
CLUHP3-201ENST00000254109 KDM4FA0A1W2PPD8 638 aa15.91■□□□□ 0.14
CLUHP3-201ENST00000254109 SPATA31E1Q6ZUB1 1445 aa15.91■□□□□ 0.14
CLUHP3-201ENST00000254109 SLC52A1Q9NWF4 448 aa15.91■□□□□ 0.14
CLUHP3-201ENST00000254109 PTPRMP28827 1452 aa15.9■□□□□ 0.14
CLUHP3-201ENST00000254109 MYO5BQ9ULV0 1848 aa15.9■□□□□ 0.14
CLUHP3-201ENST00000254109 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
CLUHP3-201ENST00000254109 NBPF8Q3BBV2 869 aa15.89■□□□□ 0.13
CLUHP3-201ENST00000254109 DCAF11Q8TEB1 546 aa15.89■□□□□ 0.13
CLUHP3-201ENST00000254109 ADGRB3O60242 1522 aa15.88■□□□□ 0.13
CLUHP3-201ENST00000254109 ZNF326Q5BKZ1 582 aaKnown RBP15.87■□□□□ 0.13
CLUHP3-201ENST00000254109 TMEM131LA2VDJ0 1609 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms