RNA–Protein interactions for RNA: ENST00000249116.6

APOBEC3A-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3A, Length 1,444 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3A-201ENST00000249116 ARHGEF5Q12774 1597 aa20.41■□□□□ 0.86
APOBEC3A-201ENST00000249116 ZNF142P52746 1687 aaPredicted RBP20.4■□□□□ 0.86
APOBEC3A-201ENST00000249116 CEP170BQ9Y4F5 1589 aaPredicted RBP20.4■□□□□ 0.86
APOBEC3A-201ENST00000249116 PKD2Q13563 968 aa20.4■□□□□ 0.86
APOBEC3A-201ENST00000249116 PLA2R1Q13018 1463 aa20.4■□□□□ 0.86
APOBEC3A-201ENST00000249116 NCKAP5LQ9HCH0 1330 aa20.39■□□□□ 0.85
APOBEC3A-201ENST00000249116 MAP3K1Q13233 1512 aa20.38■□□□□ 0.85
APOBEC3A-201ENST00000249116 FAM135AQ9P2D6 1515 aa20.38■□□□□ 0.85
APOBEC3A-201ENST00000249116 WASHC2CQ9Y4E1 1318 aa20.37■□□□□ 0.85
APOBEC3A-201ENST00000249116 KDM5DQ9BY66 1539 aa20.37■□□□□ 0.85
APOBEC3A-201ENST00000249116 LTBP4Q8N2S1 1624 aa20.37■□□□□ 0.85
APOBEC3A-201ENST00000249116 A2ML1A8K2U0 1454 aa20.35■□□□□ 0.85
APOBEC3A-201ENST00000249116 KANK4Q5T7N3 995 aaPredicted RBP20.35■□□□□ 0.85
APOBEC3A-201ENST00000249116 IQSEC2Q5JU85 1478 aa20.34■□□□□ 0.85
APOBEC3A-201ENST00000249116 MIA2Q96PC5 1412 aa20.33■□□□□ 0.85
APOBEC3A-201ENST00000249116 PZPP20742 1482 aa20.33■□□□□ 0.85
APOBEC3A-201ENST00000249116 TCOF1Q13428 1488 aaKnown RBP20.33■□□□□ 0.85
APOBEC3A-201ENST00000249116 TNRQ92752 1358 aa20.33■□□□□ 0.84
APOBEC3A-201ENST00000249116 MYOM3Q5VTT5 1437 aa20.33■□□□□ 0.84
APOBEC3A-201ENST00000249116 FBXO31Q5XUX0 539 aaPredicted RBP20.32■□□□□ 0.84
APOBEC3A-201ENST00000249116 MAST1Q9Y2H9 1570 aa20.31■□□□□ 0.84
APOBEC3A-201ENST00000249116 APLP2Q06481 763 aa20.3■□□□□ 0.84
APOBEC3A-201ENST00000249116 DNMT1P26358 1616 aaKnown RBP20.3■□□□□ 0.84
APOBEC3A-201ENST00000249116 ZNF335Q9H4Z2 1342 aaPredicted RBP20.29■□□□□ 0.84
APOBEC3A-201ENST00000249116 RNF17Q9BXT8 1623 aaKnown RBP20.25■□□□□ 0.83
APOBEC3A-201ENST00000249116 NLRP1Q9C000 1473 aa20.24■□□□□ 0.83
APOBEC3A-201ENST00000249116 EIF2AK4Q9P2K8 1649 aaKnown RBP20.24■□□□□ 0.83
APOBEC3A-201ENST00000249116 THEMISQ8N1K5 641 aaPredicted RBP20.24■□□□□ 0.83
APOBEC3A-201ENST00000249116 ZC3H13Q5T200 1668 aaKnown RBP20.22■□□□□ 0.83
APOBEC3A-201ENST00000249116 ANKLE2Q86XL3 938 aa20.21■□□□□ 0.83
APOBEC3A-201ENST00000249116 ABCC3O15438 1527 aa20.21■□□□□ 0.83
APOBEC3A-201ENST00000249116 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
APOBEC3A-201ENST00000249116 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.2■□□□□ 0.82
APOBEC3A-201ENST00000249116 UGGT1Q9NYU2 1555 aa20.2■□□□□ 0.82
APOBEC3A-201ENST00000249116 UBAP1LF5GYI3 381 aa20.19■□□□□ 0.82
APOBEC3A-201ENST00000249116 POLR1AO95602 1720 aaPredicted RBP20.18■□□□□ 0.82
APOBEC3A-201ENST00000249116 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
APOBEC3A-201ENST00000249116 KIF15Q9NS87 1388 aa20.17■□□□□ 0.82
APOBEC3A-201ENST00000249116 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
APOBEC3A-201ENST00000249116 SPATA31D1Q6ZQQ2 1576 aa20.16■□□□□ 0.82
APOBEC3A-201ENST00000249116 NEURL4Q96JN8 1562 aa20.16■□□□□ 0.82
APOBEC3A-201ENST00000249116 PTPN23Q9H3S7 1636 aa20.16■□□□□ 0.82
APOBEC3A-201ENST00000249116 ABCC5O15440 1437 aa20.16■□□□□ 0.82
APOBEC3A-201ENST00000249116 MROH1Q8NDA8 1641 aa20.15■□□□□ 0.82
APOBEC3A-201ENST00000249116 ERVK-7P63135 1459 aa20.15■□□□□ 0.82
APOBEC3A-201ENST00000249116 ERBINQ96RT1 1412 aa20.14■□□□□ 0.81
APOBEC3A-201ENST00000249116 RRP7BPQ9NSQ0 103 aa20.14■□□□□ 0.81
APOBEC3A-201ENST00000249116 FGD6Q6ZV73 1430 aa20.13■□□□□ 0.81
APOBEC3A-201ENST00000249116 CPS1P31327 1500 aa20.13■□□□□ 0.81
APOBEC3A-201ENST00000249116 NPHP4O75161 1426 aaPredicted RBP20.13■□□□□ 0.81
APOBEC3A-201ENST00000249116 DAPK1P53355 1430 aa20.13■□□□□ 0.81
APOBEC3A-201ENST00000249116 CROCC2H7BZ55 1655 aa20.13■□□□□ 0.81
APOBEC3A-201ENST00000249116 DEPDC5O75140 1603 aa20.12■□□□□ 0.81
APOBEC3A-201ENST00000249116 MED14O60244 1454 aa20.12■□□□□ 0.81
APOBEC3A-201ENST00000249116 CEP152O94986 1710 aa20.11■□□□□ 0.81
APOBEC3A-201ENST00000249116 PRDM15P57071 1507 aaPredicted RBP20.1■□□□□ 0.81
APOBEC3A-201ENST00000249116 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.09■□□□□ 0.81
APOBEC3A-201ENST00000249116 KANK1Q14678 1352 aa20.09■□□□□ 0.81
APOBEC3A-201ENST00000249116 ANKRD30AQ9BXX3 1397 aa20.09■□□□□ 0.81
APOBEC3A-201ENST00000249116 ARHGAP31Q2M1Z3 1444 aa20.09■□□□□ 0.81
APOBEC3A-201ENST00000249116 TOM1O60784 492 aa20.06■□□□□ 0.8
APOBEC3A-201ENST00000249116 CHIC2Q9UKJ5 165 aa20.06■□□□□ 0.8
APOBEC3A-201ENST00000249116 VWDEQ8N2E2 1590 aa20.06■□□□□ 0.8
APOBEC3A-201ENST00000249116 IQGAP1P46940 1657 aa20.05■□□□□ 0.8
APOBEC3A-201ENST00000249116 SCAF1Q9H7N4 1312 aaKnown RBP20.04■□□□□ 0.8
APOBEC3A-201ENST00000249116 UBR1Q8IWV7 1749 aa20.03■□□□□ 0.8
APOBEC3A-201ENST00000249116 PIP4K2BP78356 416 aa20.02■□□□□ 0.79
APOBEC3A-201ENST00000249116 SCAF11Q99590 1463 aaKnown RBP20.01■□□□□ 0.79
APOBEC3A-201ENST00000249116 ILDR2Q71H61 639 aa20.01■□□□□ 0.79
APOBEC3A-201ENST00000249116 FAM50AQ14320 339 aaKnown RBP20■□□□□ 0.79
APOBEC3A-201ENST00000249116 TXNDC2Q86VQ3 553 aa20■□□□□ 0.79
APOBEC3A-201ENST00000249116 CFAP65Q6ZU64 1925 aaKnown RBP19.99■□□□□ 0.79
APOBEC3A-201ENST00000249116 STAG3Q9UJ98 1225 aa19.99■□□□□ 0.79
APOBEC3A-201ENST00000249116 EID1Q9Y6B2 187 aa19.99■□□□□ 0.79
APOBEC3A-201ENST00000249116 LMTK2Q8IWU2 1503 aa19.99■□□□□ 0.79
APOBEC3A-201ENST00000249116 ARHGAP23Q9P227 1491 aa19.99■□□□□ 0.79
APOBEC3A-201ENST00000249116 SLIT1O75093 1534 aa19.98■□□□□ 0.79
APOBEC3A-201ENST00000249116 ADGRL2O95490 1459 aa19.98■□□□□ 0.79
APOBEC3A-201ENST00000249116 LTKP29376 864 aa19.96■□□□□ 0.79
APOBEC3A-201ENST00000249116 HSPA1LP34931 641 aa19.95■□□□□ 0.78
APOBEC3A-201ENST00000249116 PIK3C2BO00750 1634 aa19.94■□□□□ 0.78
APOBEC3A-201ENST00000249116 TMEM2Q9UHN6 1383 aa19.94■□□□□ 0.78
APOBEC3A-201ENST00000249116 LRRC7Q96NW7 1537 aa19.94■□□□□ 0.78
APOBEC3A-201ENST00000249116 SYNMO15061 1565 aa19.93■□□□□ 0.78
APOBEC3A-201ENST00000249116 SOCS7O14512 581 aa19.93■□□□□ 0.78
APOBEC3A-201ENST00000249116 IDI1Q13907 227 aa19.93■□□□□ 0.78
APOBEC3A-201ENST00000249116 ANKRD50Q9ULJ7 1429 aa19.92■□□□□ 0.78
APOBEC3A-201ENST00000249116 EFCAB6Q5THR3 1501 aa19.91■□□□□ 0.78
APOBEC3A-201ENST00000249116 STRCP1A6NGW2 1772 aa19.9■□□□□ 0.78
APOBEC3A-201ENST00000249116 KDM5AP29375 1690 aaKnown RBP19.9■□□□□ 0.78
APOBEC3A-201ENST00000249116 NOS1P29475 1434 aa19.89■□□□□ 0.78
APOBEC3A-201ENST00000249116 SLC52A1Q9NWF4 448 aa19.88■□□□□ 0.77
APOBEC3A-201ENST00000249116 RPRD2Q5VT52 1461 aaKnown RBP19.86■□□□□ 0.77
APOBEC3A-201ENST00000249116 ALKQ9UM73 1620 aa19.86■□□□□ 0.77
APOBEC3A-201ENST00000249116 ADGRB3O60242 1522 aa19.85■□□□□ 0.77
APOBEC3A-201ENST00000249116 MED1Q15648 1581 aaPredicted RBP19.81■□□□□ 0.76
APOBEC3A-201ENST00000249116 TET3O43151 1660 aa19.81■□□□□ 0.76
APOBEC3A-201ENST00000249116 ROCK1Q13464 1354 aa19.8■□□□□ 0.76
APOBEC3A-201ENST00000249116 KCNA6P17658 529 aa19.8■□□□□ 0.76
APOBEC3A-201ENST00000249116 BCANQ96GW7 911 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 134.6 ms