RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 POLR3GLQ9BT43 218 aa26.88■■□□□ 1.89
CDC42EP1-201ENST00000249014 UHRF1BP1LA0JNW5 1464 aa26.87■■□□□ 1.89
CDC42EP1-201ENST00000249014 PLCH2O75038 1416 aa26.86■■□□□ 1.89
CDC42EP1-201ENST00000249014 PLA2R1Q13018 1463 aa26.86■■□□□ 1.89
CDC42EP1-201ENST00000249014 IQGAP3Q86VI3 1631 aa26.86■■□□□ 1.89
CDC42EP1-201ENST00000249014 CCDC144AA2RUR9 1427 aa26.85■■□□□ 1.89
CDC42EP1-201ENST00000249014 GRWD1Q9BQ67 446 aaKnown RBP eCLIP26.84■■□□□ 1.89
CDC42EP1-201ENST00000249014 DUOX2Q9NRD8 1548 aa26.83■■□□□ 1.89
CDC42EP1-201ENST00000249014 TRPM1Q7Z4N2 1603 aa26.81■■□□□ 1.88
CDC42EP1-201ENST00000249014 ST20-MTHFSA0A0A6YYL1 179 aa26.81■■□□□ 1.88
CDC42EP1-201ENST00000249014 ABCC1P33527 1531 aa26.8■■□□□ 1.88
CDC42EP1-201ENST00000249014 ROCK2O75116 1388 aaKnown RBP26.79■■□□□ 1.88
CDC42EP1-201ENST00000249014 PRAG1Q86YV5 1406 aa26.79■■□□□ 1.88
CDC42EP1-201ENST00000249014 MAGI2Q86UL8 1455 aa26.79■■□□□ 1.88
CDC42EP1-201ENST00000249014 CNGB1Q14028 1251 aaPredicted RBP26.78■■□□□ 1.88
CDC42EP1-201ENST00000249014 ZBED9Q6R2W3 1325 aa26.78■■□□□ 1.88
CDC42EP1-201ENST00000249014 EFCAB2Q5VUJ9 269 aa26.77■■□□□ 1.88
CDC42EP1-201ENST00000249014 ERBINQ96RT1 1412 aa26.77■■□□□ 1.88
CDC42EP1-201ENST00000249014 A2MP01023 1474 aa26.75■■□□□ 1.87
CDC42EP1-201ENST00000249014 TRAPPC8Q9Y2L5 1435 aa26.75■■□□□ 1.87
CDC42EP1-201ENST00000249014 RGL3Q3MIN7 710 aa26.75■■□□□ 1.87
CDC42EP1-201ENST00000249014 E9PCH4 1651 aa26.72■■□□□ 1.87
CDC42EP1-201ENST00000249014 IRX6P78412 446 aaPredicted RBP26.72■■□□□ 1.87
CDC42EP1-201ENST00000249014 ATP10AO60312 1499 aa26.7■■□□□ 1.87
CDC42EP1-201ENST00000249014 NBPF1Q3BBV0 1214 aa26.69■■□□□ 1.86
CDC42EP1-201ENST00000249014 GPRASP1Q5JY77 1395 aa26.66■■□□□ 1.86
CDC42EP1-201ENST00000249014 ARAP3Q8WWN8 1544 aa26.66■■□□□ 1.86
CDC42EP1-201ENST00000249014 LAMC1P11047 1609 aa26.64■■□□□ 1.86
CDC42EP1-201ENST00000249014 PRDM15P57071 1507 aaPredicted RBP26.63■■□□□ 1.85
CDC42EP1-201ENST00000249014 ZFYVE16Q7Z3T8 1539 aa26.63■■□□□ 1.85
CDC42EP1-201ENST00000249014 AFAP1Q8N556 730 aa26.62■■□□□ 1.85
CDC42EP1-201ENST00000249014 SPAG9O60271 1321 aaKnown RBP26.61■■□□□ 1.85
CDC42EP1-201ENST00000249014 EIF2AK4Q9P2K8 1649 aaKnown RBP26.61■■□□□ 1.85
CDC42EP1-201ENST00000249014 WDR7Q9Y4E6 1490 aa26.6■■□□□ 1.85
CDC42EP1-201ENST00000249014 RTEL1-TNFRSF6BF6WH68 1400 aa26.6■■□□□ 1.85
CDC42EP1-201ENST00000249014 PNISRQ8TF01 805 aaKnown RBP26.59■■□□□ 1.85
CDC42EP1-201ENST00000249014 ABCA9Q8IUA7 1624 aa26.57■■□□□ 1.84
CDC42EP1-201ENST00000249014 TMC1Q8TDI8 760 aa26.56■■□□□ 1.84
CDC42EP1-201ENST00000249014 DEPDC5O75140 1603 aa26.54■■□□□ 1.84
CDC42EP1-201ENST00000249014 ERICH6BQ5W0A0 696 aa26.54■■□□□ 1.84
CDC42EP1-201ENST00000249014 COL17A1Q9UMD9 1497 aaPredicted RBP26.54■■□□□ 1.84
CDC42EP1-201ENST00000249014 TESK2Q96S53 571 aa26.54■■□□□ 1.84
CDC42EP1-201ENST00000249014 KTN1Q86UP2 1357 aaKnown RBP26.54■■□□□ 1.84
CDC42EP1-201ENST00000249014 RNF17Q9BXT8 1623 aaKnown RBP26.53■■□□□ 1.84
CDC42EP1-201ENST00000249014 MYBBP1AQ9BQG0 1328 aaKnown RBP26.53■■□□□ 1.84
CDC42EP1-201ENST00000249014 FANCAO15360 1455 aa26.53■■□□□ 1.84
CDC42EP1-201ENST00000249014 RALBP1Q15311 655 aa26.53■■□□□ 1.84
CDC42EP1-201ENST00000249014 SMG6Q86US8 1419 aaKnown RBP26.52■■□□□ 1.84
CDC42EP1-201ENST00000249014 INO80Q9ULG1 1556 aaPredicted RBP26.52■■□□□ 1.84
CDC42EP1-201ENST00000249014 DISP3Q9P2K9 1392 aa26.52■■□□□ 1.84
CDC42EP1-201ENST00000249014 TRPM2O94759 1503 aa26.51■■□□□ 1.83
CDC42EP1-201ENST00000249014 ATP7AQ04656 1500 aa26.51■■□□□ 1.83
CDC42EP1-201ENST00000249014 BRD4O60885 1362 aaPredicted RBP26.5■■□□□ 1.83
CDC42EP1-201ENST00000249014 SPHKAPQ2M3C7 1700 aa26.5■■□□□ 1.83
CDC42EP1-201ENST00000249014 LRPPRCP42704 1394 aaKnown RBP26.49■■□□□ 1.83
CDC42EP1-201ENST00000249014 CEP152O94986 1710 aa26.49■■□□□ 1.83
CDC42EP1-201ENST00000249014 PER1O15534 1290 aaPredicted RBP26.48■■□□□ 1.83
CDC42EP1-201ENST00000249014 MADDQ8WXG6 1647 aa26.47■■□□□ 1.83
CDC42EP1-201ENST00000249014 PPP4R2Q9NY27 417 aa26.47■■□□□ 1.83
CDC42EP1-201ENST00000249014 SENP3-EIF4A1A0A087X0R7 540 aa26.47■■□□□ 1.83
CDC42EP1-201ENST00000249014 PARD3Q8TEW0 1356 aa26.46■■□□□ 1.83
CDC42EP1-201ENST00000249014 TET3O43151 1660 aa26.46■■□□□ 1.83
CDC42EP1-201ENST00000249014 CLTCL1P53675 1640 aa26.46■■□□□ 1.83
CDC42EP1-201ENST00000249014 PTPRTO14522 1441 aa26.46■■□□□ 1.83
CDC42EP1-201ENST00000249014 RBM19Q9Y4C8 960 aaKnown RBP26.46■■□□□ 1.83
CDC42EP1-201ENST00000249014 NUDCQ9Y266 331 aa26.44■■□□□ 1.82
CDC42EP1-201ENST00000249014 VWDEQ8N2E2 1590 aa26.44■■□□□ 1.82
CDC42EP1-201ENST00000249014 ADGRL1O94910 1474 aa26.44■■□□□ 1.82
CDC42EP1-201ENST00000249014 ASXL2Q76L83 1435 aa26.42■■□□□ 1.82
CDC42EP1-201ENST00000249014 SCAPERQ9BY12 1400 aa26.42■■□□□ 1.82
CDC42EP1-201ENST00000249014 IQGAP1P46940 1657 aa26.4■■□□□ 1.82
CDC42EP1-201ENST00000249014 TMF1P82094 1093 aa26.39■■□□□ 1.82
CDC42EP1-201ENST00000249014 NLRP13Q86W25 1043 aa26.39■■□□□ 1.81
CDC42EP1-201ENST00000249014 MROH1Q8NDA8 1641 aa26.38■■□□□ 1.81
CDC42EP1-201ENST00000249014 KIF3BO15066 747 aa26.37■■□□□ 1.81
CDC42EP1-201ENST00000249014 KANK1Q14678 1352 aa26.36■■□□□ 1.81
CDC42EP1-201ENST00000249014 PANK3Q9H999 370 aa26.36■■□□□ 1.81
CDC42EP1-201ENST00000249014 MYT1LQ9UL68 1186 aa26.35■■□□□ 1.81
CDC42EP1-201ENST00000249014 RNF123Q5XPI4 1314 aa26.35■■□□□ 1.81
CDC42EP1-201ENST00000249014 B4GALNT3Q6L9W6 998 aa26.34■■□□□ 1.81
CDC42EP1-201ENST00000249014 WASHC2CQ9Y4E1 1318 aa26.34■■□□□ 1.81
CDC42EP1-201ENST00000249014 KIDINS220Q9ULH0 1771 aa26.33■■□□□ 1.81
CDC42EP1-201ENST00000249014 CC2D1BQ5T0F9 858 aaKnown RBP26.33■■□□□ 1.81
CDC42EP1-201ENST00000249014 STAC3Q96MF2 364 aa26.29■■□□□ 1.8
CDC42EP1-201ENST00000249014 UGGT1Q9NYU2 1555 aa26.29■■□□□ 1.8
CDC42EP1-201ENST00000249014 SCAF11Q99590 1463 aaKnown RBP26.28■■□□□ 1.8
CDC42EP1-201ENST00000249014 NEURL4Q96JN8 1562 aa26.27■■□□□ 1.8
CDC42EP1-201ENST00000249014 MYT1Q01538 1121 aa26.25■■□□□ 1.79
CDC42EP1-201ENST00000249014 EFCAB6Q5THR3 1501 aa26.25■■□□□ 1.79
CDC42EP1-201ENST00000249014 KIAA1210Q9ULL0 1709 aa26.25■■□□□ 1.79
CDC42EP1-201ENST00000249014 PPRC1Q5VV67 1664 aaKnown RBP26.23■■□□□ 1.79
CDC42EP1-201ENST00000249014 ZNF518AQ6AHZ1 1483 aa26.23■■□□□ 1.79
CDC42EP1-201ENST00000249014 KIF1BO60333 1816 aa26.23■■□□□ 1.79
CDC42EP1-201ENST00000249014 MAP3K4Q9Y6R4 1608 aa26.21■■□□□ 1.79
CDC42EP1-201ENST00000249014 SALL2Q9Y467 1007 aaPredicted RBP26.2■■□□□ 1.79
CDC42EP1-201ENST00000249014 SYNMO15061 1565 aa26.2■■□□□ 1.78
CDC42EP1-201ENST00000249014 MROH2AA6NES4 1674 aa26.19■■□□□ 1.78
CDC42EP1-201ENST00000249014 IFT172Q9UG01 1749 aa26.19■■□□□ 1.78
CDC42EP1-201ENST00000249014 OSCARQ8IYS5 282 aa26.19■■□□□ 1.78
CDC42EP1-201ENST00000249014 ABCA6Q8N139 1617 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms