RNA–Protein interactions for RNA: ENST00000246672.3

NR1D1-201, Transcript of nuclear receptor subfamily 1 group D member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NR1D1, Length 2,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1D1-201ENST00000246672 PKNOX2Q96KN3 472 aa16.32■□□□□ 0.2
NR1D1-201ENST00000246672 DNAJC5BQ9UF47 199 aa16.31■□□□□ 0.2
NR1D1-201ENST00000246672 ZNF777Q9ULD5 760 aaPredicted RBP16.31■□□□□ 0.2
NR1D1-201ENST00000246672 E9PCH4 1651 aa16.3■□□□□ 0.2
NR1D1-201ENST00000246672 C8orf34Q49A92 452 aa16.3■□□□□ 0.2
NR1D1-201ENST00000246672 C20orf194Q5TEA3 1177 aa16.3■□□□□ 0.2
NR1D1-201ENST00000246672 CAMSAP2Q08AD1 1489 aa16.3■□□□□ 0.2
NR1D1-201ENST00000246672 FAM161AQ3B820 660 aa16.3■□□□□ 0.2
NR1D1-201ENST00000246672 CFDP1Q9UEE9 299 aaPredicted RBP16.3■□□□□ 0.2
NR1D1-201ENST00000246672 PARD3Q8TEW0 1356 aa16.3■□□□□ 0.2
NR1D1-201ENST00000246672 KDM2BQ8NHM5 1336 aa16.29■□□□□ 0.2
NR1D1-201ENST00000246672 RRAGDQ9NQL2 400 aaPredicted RBP16.28■□□□□ 0.2
NR1D1-201ENST00000246672 ADGBQ8N7X0 1667 aa16.27■□□□□ 0.2
NR1D1-201ENST00000246672 NUP153P49790 1475 aaKnown RBP16.27■□□□□ 0.19
NR1D1-201ENST00000246672 KIAA0586Q9BVV6 1533 aa16.26■□□□□ 0.19
NR1D1-201ENST00000246672 POGKQ9P215 609 aa16.26■□□□□ 0.19
NR1D1-201ENST00000246672 CC2D1BQ5T0F9 858 aaKnown RBP16.25■□□□□ 0.19
NR1D1-201ENST00000246672 PRG4Q92954 1404 aaPredicted RBP16.25■□□□□ 0.19
NR1D1-201ENST00000246672 NUP155O75694 1391 aa16.25■□□□□ 0.19
NR1D1-201ENST00000246672 ARHGEF12Q9NZN5 1544 aa16.25■□□□□ 0.19
NR1D1-201ENST00000246672 ANKRD50Q9ULJ7 1429 aa16.24■□□□□ 0.19
NR1D1-201ENST00000246672 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
NR1D1-201ENST00000246672 CENPQQ7L2Z9 268 aaPredicted RBP16.24■□□□□ 0.19
NR1D1-201ENST00000246672 ANKRD30AQ9BXX3 1397 aa16.24■□□□□ 0.19
NR1D1-201ENST00000246672 TARBP1Q13395 1621 aaKnown RBP16.24■□□□□ 0.19
NR1D1-201ENST00000246672 ADGRL2O95490 1459 aa16.24■□□□□ 0.19
NR1D1-201ENST00000246672 PBRM1Q86U86 1689 aa16.23■□□□□ 0.19
NR1D1-201ENST00000246672 RGS3P49796 1198 aa16.22■□□□□ 0.19
NR1D1-201ENST00000246672 BLMP54132 1417 aaPredicted RBP16.22■□□□□ 0.19
NR1D1-201ENST00000246672 GPATCH8Q9UKJ3 1502 aaKnown RBP16.21■□□□□ 0.18
NR1D1-201ENST00000246672 ADAMTS12P58397 1594 aa16.2■□□□□ 0.18
NR1D1-201ENST00000246672 RAPGEF6Q8TEU7 1601 aa16.2■□□□□ 0.18
NR1D1-201ENST00000246672 CROCC2H7BZ55 1655 aa16.2■□□□□ 0.18
NR1D1-201ENST00000246672 TROQ12816 1431 aaPredicted RBP16.19■□□□□ 0.18
NR1D1-201ENST00000246672 GLIPR1L2Q4G1C9 344 aa16.19■□□□□ 0.18
NR1D1-201ENST00000246672 DISP1Q96F81 1524 aa16.18■□□□□ 0.18
NR1D1-201ENST00000246672 KIAA0556O60303 1618 aa16.18■□□□□ 0.18
NR1D1-201ENST00000246672 VSIG10Q8N0Z9 540 aa16.17■□□□□ 0.18
NR1D1-201ENST00000246672 ITSN2Q9NZM3 1697 aa16.17■□□□□ 0.18
NR1D1-201ENST00000246672 NBPF1Q3BBV0 1214 aa16.17■□□□□ 0.18
NR1D1-201ENST00000246672 ZMYM4Q5VZL5 1548 aa16.17■□□□□ 0.18
NR1D1-201ENST00000246672 PDS5BQ9NTI5 1447 aa16.17■□□□□ 0.18
NR1D1-201ENST00000246672 ZMYND15Q9H091 742 aa16.16■□□□□ 0.18
NR1D1-201ENST00000246672 PANK3Q9H999 370 aa16.16■□□□□ 0.18
NR1D1-201ENST00000246672 CEP170Q5SW79 1584 aa16.16■□□□□ 0.18
NR1D1-201ENST00000246672 ADAMTS8Q9UP79 889 aa16.15■□□□□ 0.18
NR1D1-201ENST00000246672 ZNF608Q9ULD9 1512 aaPredicted RBP16.15■□□□□ 0.18
NR1D1-201ENST00000246672 INSRP06213 1382 aa16.14■□□□□ 0.17
NR1D1-201ENST00000246672 L1TD1Q5T7N2 865 aaKnown RBP16.14■□□□□ 0.17
NR1D1-201ENST00000246672 DISP3Q9P2K9 1392 aa16.13■□□□□ 0.17
NR1D1-201ENST00000246672 USP19O94966 1318 aa16.13■□□□□ 0.17
NR1D1-201ENST00000246672 PLEKHH2Q8IVE3 1493 aa16.13■□□□□ 0.17
NR1D1-201ENST00000246672 NAP1L5Q96NT1 182 aaPredicted RBP16.13■□□□□ 0.17
NR1D1-201ENST00000246672 ARXQ96QS3 562 aa16.13■□□□□ 0.17
NR1D1-201ENST00000246672 SLKQ9H2G2 1235 aaPredicted RBP16.13■□□□□ 0.17
NR1D1-201ENST00000246672 RGL3Q3MIN7 710 aa16.13■□□□□ 0.17
NR1D1-201ENST00000246672 DUSP27Q5VZP5 1158 aa16.13■□□□□ 0.17
NR1D1-201ENST00000246672 PRAG1Q86YV5 1406 aa16.12■□□□□ 0.17
NR1D1-201ENST00000246672 KDM5DQ9BY66 1539 aa16.12■□□□□ 0.17
NR1D1-201ENST00000246672 PLEKHH1Q9ULM0 1364 aa16.12■□□□□ 0.17
NR1D1-201ENST00000246672 TRPM1Q7Z4N2 1603 aa16.11■□□□□ 0.17
NR1D1-201ENST00000246672 C9orf84Q5VXU9 1444 aa16.11■□□□□ 0.17
NR1D1-201ENST00000246672 COL17A1Q9UMD9 1497 aaPredicted RBP16.1■□□□□ 0.17
NR1D1-201ENST00000246672 TESK2Q96S53 571 aa16.1■□□□□ 0.17
NR1D1-201ENST00000246672 PNNQ9H307 717 aaKnown RBP16.09■□□□□ 0.17
NR1D1-201ENST00000246672 XRCC6P12956 609 aaKnown RBP eCLIP16.09■□□□□ 0.17
NR1D1-201ENST00000246672 HSP90AA2PQ14568 343 aaPredicted RBP16.09■□□□□ 0.17
NR1D1-201ENST00000246672 SEC24BO95487 1268 aa16.09■□□□□ 0.17
NR1D1-201ENST00000246672 PLB1Q6P1J6 1458 aa16.09■□□□□ 0.17
NR1D1-201ENST00000246672 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.07■□□□□ 0.16
NR1D1-201ENST00000246672 CDC42BPAQ5VT25 1732 aa16.07■□□□□ 0.16
NR1D1-201ENST00000246672 TSPY4P0CV99 314 aa16.07■□□□□ 0.16
NR1D1-201ENST00000246672 TSPY10P0CW01 314 aa16.07■□□□□ 0.16
NR1D1-201ENST00000246672 PTPRGP23470 1445 aa16.07■□□□□ 0.16
NR1D1-201ENST00000246672 ADCY10Q96PN6 1610 aa16.06■□□□□ 0.16
NR1D1-201ENST00000246672 GOLGA2Q08379 1002 aa16.06■□□□□ 0.16
NR1D1-201ENST00000246672 HSP90AA1P07900 732 aaKnown RBP16.06■□□□□ 0.16
NR1D1-201ENST00000246672 CLCN1P35523 988 aa16.06■□□□□ 0.16
NR1D1-201ENST00000246672 WDR43Q15061 677 aaKnown RBP eCLIP16.06■□□□□ 0.16
NR1D1-201ENST00000246672 PANK2Q9BZ23 570 aa16.06■□□□□ 0.16
NR1D1-201ENST00000246672 ERBINQ96RT1 1412 aa16.06■□□□□ 0.16
NR1D1-201ENST00000246672 BECN1Q14457 450 aa16.05■□□□□ 0.16
NR1D1-201ENST00000246672 ZNF521Q96K83 1311 aa16.05■□□□□ 0.16
NR1D1-201ENST00000246672 ANTXR1Q9H6X2 564 aa16.05■□□□□ 0.16
NR1D1-201ENST00000246672 SHANK2Q9UPX8 1470 aa16.05■□□□□ 0.16
NR1D1-201ENST00000246672 GPRASP1Q5JY77 1395 aa16.04■□□□□ 0.16
NR1D1-201ENST00000246672 RRP9O43818 475 aaKnown RBP16.04■□□□□ 0.16
NR1D1-201ENST00000246672 CCDC144AA2RUR9 1427 aa16.04■□□□□ 0.16
NR1D1-201ENST00000246672 GOLGA6L3A6NEY3 463 aa16.04■□□□□ 0.16
NR1D1-201ENST00000246672 HNRNPMP52272 730 aaKnown RBP eCLIP16.04■□□□□ 0.16
NR1D1-201ENST00000246672 TMF1P82094 1093 aa16.04■□□□□ 0.16
NR1D1-201ENST00000246672 IGHDP01880 384 aa16.03■□□□□ 0.16
NR1D1-201ENST00000246672 PPP2R1AP30153 589 aa16.03■□□□□ 0.16
NR1D1-201ENST00000246672 EIF4G3O43432 1585 aaKnown RBP16.03■□□□□ 0.16
NR1D1-201ENST00000246672 SLFN5Q08AF3 891 aa16.02■□□□□ 0.16
NR1D1-201ENST00000246672 GZF1Q9H116 711 aaPredicted RBP16.02■□□□□ 0.16
NR1D1-201ENST00000246672 PRDM15P57071 1507 aaPredicted RBP16.02■□□□□ 0.15
NR1D1-201ENST00000246672 FSD2A1L4K1 749 aa16.02■□□□□ 0.15
NR1D1-201ENST00000246672 FAM135AQ9P2D6 1515 aa16.01■□□□□ 0.15
NR1D1-201ENST00000246672 A2MP01023 1474 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms