RNA–Protein interactions for RNA: ENST00000244670.12

KLHDC3-201, Transcript of kelch domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene KLHDC3, Length 1,903 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC3-201ENST00000244670 HECW2Q9P2P5 1572 aa25.75■■□□□ 1.71
KLHDC3-201ENST00000244670 PPRC1Q5VV67 1664 aaKnown RBP25.72■■□□□ 1.71
KLHDC3-201ENST00000244670 DHX29Q7Z478 1369 aaKnown RBP25.72■■□□□ 1.71
KLHDC3-201ENST00000244670 MLH3Q9UHC1 1453 aa25.71■■□□□ 1.71
KLHDC3-201ENST00000244670 L3MBTL2Q969R5 705 aa25.71■■□□□ 1.71
KLHDC3-201ENST00000244670 RICTORQ6R327 1708 aa25.71■■□□□ 1.71
KLHDC3-201ENST00000244670 KIF13AQ9H1H9 1805 aa25.71■■□□□ 1.71
KLHDC3-201ENST00000244670 DEPDC5O75140 1603 aa25.7■■□□□ 1.7
KLHDC3-201ENST00000244670 TEX14Q8IWB6 1497 aa25.69■■□□□ 1.7
KLHDC3-201ENST00000244670 EIF2AK4Q9P2K8 1649 aaKnown RBP25.69■■□□□ 1.7
KLHDC3-201ENST00000244670 KIF3BO15066 747 aa25.69■■□□□ 1.7
KLHDC3-201ENST00000244670 ABCA6Q8N139 1617 aa25.68■■□□□ 1.7
KLHDC3-201ENST00000244670 A2MP01023 1474 aa25.67■■□□□ 1.7
KLHDC3-201ENST00000244670 FRMPD1Q5SYB0 1578 aa25.63■■□□□ 1.69
KLHDC3-201ENST00000244670 MROH1Q8NDA8 1641 aa25.62■■□□□ 1.69
KLHDC3-201ENST00000244670 PRDM15P57071 1507 aaPredicted RBP25.6■■□□□ 1.69
KLHDC3-201ENST00000244670 DIP2CQ9Y2E4 1556 aa25.6■■□□□ 1.69
KLHDC3-201ENST00000244670 E9PCH4 1651 aa25.6■■□□□ 1.69
KLHDC3-201ENST00000244670 KANK1Q14678 1352 aa25.59■■□□□ 1.69
KLHDC3-201ENST00000244670 PLA2R1Q13018 1463 aa25.59■■□□□ 1.69
KLHDC3-201ENST00000244670 VWDEQ8N2E2 1590 aa25.58■■□□□ 1.69
KLHDC3-201ENST00000244670 CCDC144AA2RUR9 1427 aa25.57■■□□□ 1.68
KLHDC3-201ENST00000244670 TET3O43151 1660 aa25.56■■□□□ 1.68
KLHDC3-201ENST00000244670 YEATS2Q9ULM3 1422 aa25.56■■□□□ 1.68
KLHDC3-201ENST00000244670 RNF17Q9BXT8 1623 aaKnown RBP25.55■■□□□ 1.68
KLHDC3-201ENST00000244670 HIRIP3Q9BW71 556 aaPredicted RBP25.55■■□□□ 1.68
KLHDC3-201ENST00000244670 NBPF8Q3BBV2 869 aa25.53■■□□□ 1.68
KLHDC3-201ENST00000244670 ZMYM4Q5VZL5 1548 aa25.52■■□□□ 1.68
KLHDC3-201ENST00000244670 CEP152O94986 1710 aa25.52■■□□□ 1.68
KLHDC3-201ENST00000244670 BCORL1Q5H9F3 1711 aa25.5■■□□□ 1.67
KLHDC3-201ENST00000244670 GGT6Q6P531 493 aa25.5■■□□□ 1.67
KLHDC3-201ENST00000244670 ATP10AO60312 1499 aa25.49■■□□□ 1.67
KLHDC3-201ENST00000244670 SPHKAPQ2M3C7 1700 aa25.49■■□□□ 1.67
KLHDC3-201ENST00000244670 ZNF326Q5BKZ1 582 aaKnown RBP25.48■■□□□ 1.67
KLHDC3-201ENST00000244670 MIER1Q8N108 512 aa25.48■■□□□ 1.67
KLHDC3-201ENST00000244670 EFCAB6Q5THR3 1501 aa25.45■■□□□ 1.66
KLHDC3-201ENST00000244670 COL17A1Q9UMD9 1497 aaPredicted RBP25.44■■□□□ 1.66
KLHDC3-201ENST00000244670 TRPM2O94759 1503 aa25.44■■□□□ 1.66
KLHDC3-201ENST00000244670 RGL3Q3MIN7 710 aa25.43■■□□□ 1.66
KLHDC3-201ENST00000244670 KDM2AQ9Y2K7 1162 aa25.43■■□□□ 1.66
KLHDC3-201ENST00000244670 DCAF11Q8TEB1 546 aa25.43■■□□□ 1.66
KLHDC3-201ENST00000244670 LMTK2Q8IWU2 1503 aa25.42■■□□□ 1.66
KLHDC3-201ENST00000244670 PTPRTO14522 1441 aa25.41■■□□□ 1.66
KLHDC3-201ENST00000244670 CLTCL1P53675 1640 aa25.4■■□□□ 1.66
KLHDC3-201ENST00000244670 ABCC3O15438 1527 aa25.38■■□□□ 1.65
KLHDC3-201ENST00000244670 WASHC2CQ9Y4E1 1318 aa25.38■■□□□ 1.65
KLHDC3-201ENST00000244670 HSPA5P11021 654 aaKnown RBP25.37■■□□□ 1.65
KLHDC3-201ENST00000244670 UHRF1BP1Q6BDS2 1440 aa25.37■■□□□ 1.65
KLHDC3-201ENST00000244670 CFAP65Q6ZU64 1925 aaKnown RBP25.37■■□□□ 1.65
KLHDC3-201ENST00000244670 EIF4G2P78344 907 aaKnown RBP eCLIP25.35■■□□□ 1.65
KLHDC3-201ENST00000244670 UGGT1Q9NYU2 1555 aa25.34■■□□□ 1.65
KLHDC3-201ENST00000244670 CAMSAP1Q5T5Y3 1602 aa25.34■■□□□ 1.65
KLHDC3-201ENST00000244670 NPATQ14207 1427 aa25.32■■□□□ 1.64
KLHDC3-201ENST00000244670 SPATA31E1Q6ZUB1 1445 aa25.32■■□□□ 1.64
KLHDC3-201ENST00000244670 TRHP20396 242 aaPredicted RBP25.3■■□□□ 1.64
KLHDC3-201ENST00000244670 ARHGEF40Q8TER5 1519 aa25.3■■□□□ 1.64
KLHDC3-201ENST00000244670 SIGLEC1Q9BZZ2 1709 aa25.3■■□□□ 1.64
KLHDC3-201ENST00000244670 RALGAPBQ86X10 1494 aa25.3■■□□□ 1.64
KLHDC3-201ENST00000244670 REREQ9P2R6 1566 aa25.29■■□□□ 1.64
KLHDC3-201ENST00000244670 ZC3H13Q5T200 1668 aaKnown RBP25.29■■□□□ 1.64
KLHDC3-201ENST00000244670 PRAG1Q86YV5 1406 aa25.28■■□□□ 1.64
KLHDC3-201ENST00000244670 DDX10Q13206 875 aaKnown RBP25.27■■□□□ 1.64
KLHDC3-201ENST00000244670 DNAJC5Q9H3Z4 198 aa25.25■■□□□ 1.63
KLHDC3-201ENST00000244670 KIF1BO60333 1816 aa25.25■■□□□ 1.63
KLHDC3-201ENST00000244670 TRPM1Q7Z4N2 1603 aa25.24■■□□□ 1.63
KLHDC3-201ENST00000244670 AGLP35573 1532 aa25.24■■□□□ 1.63
KLHDC3-201ENST00000244670 USP47Q96K76 1375 aa25.22■■□□□ 1.63
KLHDC3-201ENST00000244670 CARD11Q9BXL7 1154 aa25.22■■□□□ 1.63
KLHDC3-201ENST00000244670 MROH2AA6NES4 1674 aa25.21■■□□□ 1.63
KLHDC3-201ENST00000244670 ROCK2O75116 1388 aaKnown RBP25.21■■□□□ 1.63
KLHDC3-201ENST00000244670 CNTLNQ9NXG0 1405 aa25.2■■□□□ 1.62
KLHDC3-201ENST00000244670 MLECQ14165 292 aa25.2■■□□□ 1.62
KLHDC3-201ENST00000244670 ARHGAP31Q2M1Z3 1444 aa25.17■■□□□ 1.62
KLHDC3-201ENST00000244670 WASHC2AQ641Q2 1341 aa25.17■■□□□ 1.62
KLHDC3-201ENST00000244670 MADDQ8WXG6 1647 aa25.16■■□□□ 1.62
KLHDC3-201ENST00000244670 SYNMO15061 1565 aa25.16■■□□□ 1.62
KLHDC3-201ENST00000244670 NEURL4Q96JN8 1562 aa25.16■■□□□ 1.62
KLHDC3-201ENST00000244670 NOS1P29475 1434 aa25.16■■□□□ 1.62
KLHDC3-201ENST00000244670 CHGAP10645 457 aaKnown RBP25.16■■□□□ 1.62
KLHDC3-201ENST00000244670 NBPF1Q3BBV0 1214 aa25.16■■□□□ 1.62
KLHDC3-201ENST00000244670 CLTCQ00610 1675 aaKnown RBP25.15■■□□□ 1.62
KLHDC3-201ENST00000244670 C11orf95C9JLR9 678 aaPredicted RBP25.14■■□□□ 1.62
KLHDC3-201ENST00000244670 ADGRB3O60242 1522 aa25.14■■□□□ 1.61
KLHDC3-201ENST00000244670 PREX1Q8TCU6 1659 aa25.13■■□□□ 1.61
KLHDC3-201ENST00000244670 CENPBP07199 599 aaPredicted RBP25.12■■□□□ 1.61
KLHDC3-201ENST00000244670 YTHDC1Q96MU7 727 aaKnown RBP25.11■■□□□ 1.61
KLHDC3-201ENST00000244670 IFT172Q9UG01 1749 aa25.11■■□□□ 1.61
KLHDC3-201ENST00000244670 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
KLHDC3-201ENST00000244670 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
KLHDC3-201ENST00000244670 CCDC7Q96M83 1385 aa25.09■■□□□ 1.61
KLHDC3-201ENST00000244670 ARID4BQ4LE39 1312 aaPredicted RBP25.09■■□□□ 1.61
KLHDC3-201ENST00000244670 GPRASP1Q5JY77 1395 aa25.08■■□□□ 1.61
KLHDC3-201ENST00000244670 PPP6R1Q9UPN7 881 aa25.08■■□□□ 1.6
KLHDC3-201ENST00000244670 FBXO31Q5XUX0 539 aaPredicted RBP25.07■■□□□ 1.6
KLHDC3-201ENST00000244670 LAMC1P11047 1609 aa25.06■■□□□ 1.6
KLHDC3-201ENST00000244670 ST20-MTHFSA0A0A6YYL1 179 aa25.06■■□□□ 1.6
KLHDC3-201ENST00000244670 STAC3Q96MF2 364 aa25.06■■□□□ 1.6
KLHDC3-201ENST00000244670 KIF7Q2M1P5 1343 aa25.05■■□□□ 1.6
KLHDC3-201ENST00000244670 MYOM2P54296 1465 aa25.05■■□□□ 1.6
KLHDC3-201ENST00000244670 ADGRF5Q8IZF2 1346 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms