RNA–Protein interactions for RNA: ENST00000243325.6

RAB9A-201, Transcript of RAB9A, member RAS oncogene family, humanhuman

TSL 3

Gene RAB9A, Length 393 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB9A-201ENST00000243325 PPARGC1BQ86YN6 1023 aaKnown RBP25.62■■□□□ 1.69
RAB9A-201ENST00000243325 SHANK2Q9UPX8 1470 aa25.61■■□□□ 1.69
RAB9A-201ENST00000243325 KIF15Q9NS87 1388 aa25.6■■□□□ 1.69
RAB9A-201ENST00000243325 FBXO31Q5XUX0 539 aaPredicted RBP25.6■■□□□ 1.69
RAB9A-201ENST00000243325 ILDR1Q86SU0 546 aaPredicted RBP25.6■■□□□ 1.69
RAB9A-201ENST00000243325 KDM5DQ9BY66 1539 aa25.59■■□□□ 1.69
RAB9A-201ENST00000243325 DNMT1P26358 1616 aaKnown RBP25.59■■□□□ 1.69
RAB9A-201ENST00000243325 DUOX2Q9NRD8 1548 aa25.58■■□□□ 1.69
RAB9A-201ENST00000243325 CROCC2H7BZ55 1655 aa25.57■■□□□ 1.68
RAB9A-201ENST00000243325 DMRT2Q9Y5R5 561 aa25.56■■□□□ 1.68
RAB9A-201ENST00000243325 FAM135AQ9P2D6 1515 aa25.55■■□□□ 1.68
RAB9A-201ENST00000243325 ANKRD30AQ9BXX3 1397 aa25.54■■□□□ 1.68
RAB9A-201ENST00000243325 STRCQ7RTU9 1775 aa25.54■■□□□ 1.68
RAB9A-201ENST00000243325 RNF17Q9BXT8 1623 aaKnown RBP25.53■■□□□ 1.68
RAB9A-201ENST00000243325 EIF2AK4Q9P2K8 1649 aaKnown RBP25.53■■□□□ 1.68
RAB9A-201ENST00000243325 PZPP20742 1482 aa25.53■■□□□ 1.68
RAB9A-201ENST00000243325 MYO3AQ8NEV4 1616 aa25.5■■□□□ 1.67
RAB9A-201ENST00000243325 TNRQ92752 1358 aa25.5■■□□□ 1.67
RAB9A-201ENST00000243325 ERBINQ96RT1 1412 aa25.5■■□□□ 1.67
RAB9A-201ENST00000243325 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.5■■□□□ 1.67
RAB9A-201ENST00000243325 ABCC3O15438 1527 aa25.49■■□□□ 1.67
RAB9A-201ENST00000243325 NCOA1Q15788 1441 aa25.49■■□□□ 1.67
RAB9A-201ENST00000243325 CAMSAP1Q5T5Y3 1602 aa25.48■■□□□ 1.67
RAB9A-201ENST00000243325 MROH1Q8NDA8 1641 aa25.48■■□□□ 1.67
RAB9A-201ENST00000243325 NCKAP5LQ9HCH0 1330 aa25.47■■□□□ 1.67
RAB9A-201ENST00000243325 CEP170BQ9Y4F5 1589 aaPredicted RBP25.47■■□□□ 1.67
RAB9A-201ENST00000243325 A2ML1A8K2U0 1454 aa25.44■■□□□ 1.66
RAB9A-201ENST00000243325 PTPRTO14522 1441 aa25.44■■□□□ 1.66
RAB9A-201ENST00000243325 ZNF142P52746 1687 aaPredicted RBP25.43■■□□□ 1.66
RAB9A-201ENST00000243325 ADGRL2O95490 1459 aa25.43■■□□□ 1.66
RAB9A-201ENST00000243325 ZC3H13Q5T200 1668 aaKnown RBP25.42■■□□□ 1.66
RAB9A-201ENST00000243325 ITGAEP38570 1179 aa25.4■■□□□ 1.66
RAB9A-201ENST00000243325 PKD2Q13563 968 aa25.4■■□□□ 1.66
RAB9A-201ENST00000243325 CERKQ8TCT0 537 aa25.4■■□□□ 1.66
RAB9A-201ENST00000243325 FBXO41Q8TF61 875 aa25.4■■□□□ 1.66
RAB9A-201ENST00000243325 CEP152O94986 1710 aa25.39■■□□□ 1.65
RAB9A-201ENST00000243325 KANK1Q14678 1352 aa25.39■■□□□ 1.65
RAB9A-201ENST00000243325 PRDM15P57071 1507 aaPredicted RBP25.38■■□□□ 1.65
RAB9A-201ENST00000243325 PLA2R1Q13018 1463 aa25.38■■□□□ 1.65
RAB9A-201ENST00000243325 ERVK-7P63135 1459 aa25.35■■□□□ 1.65
RAB9A-201ENST00000243325 NLRP1Q9C000 1473 aa25.35■■□□□ 1.65
RAB9A-201ENST00000243325 ANKRD50Q9ULJ7 1429 aa25.35■■□□□ 1.65
RAB9A-201ENST00000243325 SPATA31D1Q6ZQQ2 1576 aa25.35■■□□□ 1.65
RAB9A-201ENST00000243325 DEPDC5O75140 1603 aa25.34■■□□□ 1.65
RAB9A-201ENST00000243325 THEMISQ8N1K5 641 aaPredicted RBP25.34■■□□□ 1.65
RAB9A-201ENST00000243325 CFAP65Q6ZU64 1925 aaKnown RBP25.32■■□□□ 1.64
RAB9A-201ENST00000243325 ARHGAP31Q2M1Z3 1444 aa25.32■■□□□ 1.64
RAB9A-201ENST00000243325 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP25.31■■□□□ 1.64
RAB9A-201ENST00000243325 UGGT1Q9NYU2 1555 aa25.3■■□□□ 1.64
RAB9A-201ENST00000243325 ROCK1Q13464 1354 aa25.29■■□□□ 1.64
RAB9A-201ENST00000243325 ANKLE2Q86XL3 938 aa25.28■■□□□ 1.64
RAB9A-201ENST00000243325 VWDEQ8N2E2 1590 aa25.27■■□□□ 1.64
RAB9A-201ENST00000243325 LMTK2Q8IWU2 1503 aa25.27■■□□□ 1.64
RAB9A-201ENST00000243325 ZNF335Q9H4Z2 1342 aaPredicted RBP25.24■■□□□ 1.63
RAB9A-201ENST00000243325 LTBP4Q8N2S1 1624 aa25.22■■□□□ 1.63
RAB9A-201ENST00000243325 RRBP1Q9P2E9 1410 aaKnown RBP25.21■■□□□ 1.63
RAB9A-201ENST00000243325 NEURL4Q96JN8 1562 aa25.18■■□□□ 1.62
RAB9A-201ENST00000243325 IDI1Q13907 227 aa25.18■■□□□ 1.62
RAB9A-201ENST00000243325 EFCAB6Q5THR3 1501 aa25.17■■□□□ 1.62
RAB9A-201ENST00000243325 STAG3Q9UJ98 1225 aa25.17■■□□□ 1.62
RAB9A-201ENST00000243325 POLR1AO95602 1720 aaPredicted RBP25.17■■□□□ 1.62
RAB9A-201ENST00000243325 NPHP4O75161 1426 aaPredicted RBP25.15■■□□□ 1.62
RAB9A-201ENST00000243325 UBR1Q8IWV7 1749 aa25.15■■□□□ 1.62
RAB9A-201ENST00000243325 NOS1P29475 1434 aa25.14■■□□□ 1.62
RAB9A-201ENST00000243325 TXNDC2Q86VQ3 553 aa25.13■■□□□ 1.61
RAB9A-201ENST00000243325 UNC13BO14795 1591 aa25.13■■□□□ 1.61
RAB9A-201ENST00000243325 LTKP29376 864 aa25.12■■□□□ 1.61
RAB9A-201ENST00000243325 NUP155O75694 1391 aa25.12■■□□□ 1.61
RAB9A-201ENST00000243325 MED14O60244 1454 aa25.12■■□□□ 1.61
RAB9A-201ENST00000243325 PIK3C2BO00750 1634 aa25.11■■□□□ 1.61
RAB9A-201ENST00000243325 SYNMO15061 1565 aa25.1■■□□□ 1.61
RAB9A-201ENST00000243325 RPRD2Q5VT52 1461 aaKnown RBP25.1■■□□□ 1.61
RAB9A-201ENST00000243325 SLC52A1Q9NWF4 448 aa25.1■■□□□ 1.61
RAB9A-201ENST00000243325 EID1Q9Y6B2 187 aa25.09■■□□□ 1.61
RAB9A-201ENST00000243325 TET3O43151 1660 aa25.09■■□□□ 1.61
RAB9A-201ENST00000243325 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
RAB9A-201ENST00000243325 ARHGAP23Q9P227 1491 aa25.07■■□□□ 1.6
RAB9A-201ENST00000243325 SLIT1O75093 1534 aa25.07■■□□□ 1.6
RAB9A-201ENST00000243325 TMEM2Q9UHN6 1383 aa25.06■■□□□ 1.6
RAB9A-201ENST00000243325 IQSEC2Q5JU85 1478 aa25.05■■□□□ 1.6
RAB9A-201ENST00000243325 IQGAP1P46940 1657 aa25.04■■□□□ 1.6
RAB9A-201ENST00000243325 IQGAP3Q86VI3 1631 aa25.04■■□□□ 1.6
RAB9A-201ENST00000243325 GCC2Q8IWJ2 1684 aa25.03■■□□□ 1.6
RAB9A-201ENST00000243325 NAIPQ13075 1403 aa25.03■■□□□ 1.6
RAB9A-201ENST00000243325 E9PCH4 1651 aa25■■□□□ 1.59
RAB9A-201ENST00000243325 ADGRB3O60242 1522 aa24.99■■□□□ 1.59
RAB9A-201ENST00000243325 CHGAP10645 457 aaKnown RBP24.99■■□□□ 1.59
RAB9A-201ENST00000243325 UBAP1LF5GYI3 381 aa24.98■■□□□ 1.59
RAB9A-201ENST00000243325 KDM5AP29375 1690 aaKnown RBP24.97■■□□□ 1.59
RAB9A-201ENST00000243325 CPS1P31327 1500 aa24.97■■□□□ 1.59
RAB9A-201ENST00000243325 TRIM52Q96A61 297 aa24.94■■□□□ 1.58
RAB9A-201ENST00000243325 HFM1A2PYH4 1435 aa24.94■■□□□ 1.58
RAB9A-201ENST00000243325 SENP3Q9H4L4 574 aaPredicted RBP24.93■■□□□ 1.58
RAB9A-201ENST00000243325 BCANQ96GW7 911 aa24.92■■□□□ 1.58
RAB9A-201ENST00000243325 SLC26A8Q96RN1 970 aa24.91■■□□□ 1.58
RAB9A-201ENST00000243325 HDGFP51858 240 aaKnown RBP24.9■■□□□ 1.58
RAB9A-201ENST00000243325 RIMS2Q9UQ26 1411 aa24.89■■□□□ 1.58
RAB9A-201ENST00000243325 PPP1R15AO75807 674 aaPredicted RBP24.89■■□□□ 1.58
RAB9A-201ENST00000243325 TMEM131LA2VDJ0 1609 aa24.89■■□□□ 1.57
RAB9A-201ENST00000243325 NUTM2DQ5VT03 806 aaPredicted RBP24.88■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms