RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 PLEKHH2Q8IVE3 1493 aa15.9■□□□□ 0.14
NDUFB3-201ENST00000237889 FAM135BQ49AJ0 1406 aa15.89■□□□□ 0.13
NDUFB3-201ENST00000237889 MIA2Q96PC5 1412 aa15.89■□□□□ 0.13
NDUFB3-201ENST00000237889 UPF1Q92900 1129 aaKnown RBP eCLIP15.89■□□□□ 0.13
NDUFB3-201ENST00000237889 ALKQ9UM73 1620 aa15.89■□□□□ 0.13
NDUFB3-201ENST00000237889 NEURL4Q96JN8 1562 aa15.88■□□□□ 0.13
NDUFB3-201ENST00000237889 NLRP1Q9C000 1473 aa15.88■□□□□ 0.13
NDUFB3-201ENST00000237889 ITSN2Q9NZM3 1697 aa15.88■□□□□ 0.13
NDUFB3-201ENST00000237889 KIF3BO15066 747 aa15.87■□□□□ 0.13
NDUFB3-201ENST00000237889 CDC42BPBQ9Y5S2 1711 aa15.87■□□□□ 0.13
NDUFB3-201ENST00000237889 ATP7AQ04656 1500 aa15.87■□□□□ 0.13
NDUFB3-201ENST00000237889 PREX2Q70Z35 1606 aa15.86■□□□□ 0.13
NDUFB3-201ENST00000237889 RNF17Q9BXT8 1623 aaKnown RBP15.85■□□□□ 0.13
NDUFB3-201ENST00000237889 PZPP20742 1482 aa15.84■□□□□ 0.13
NDUFB3-201ENST00000237889 CCDC18Q5T9S5 1454 aa15.84■□□□□ 0.13
NDUFB3-201ENST00000237889 PLXNC1O60486 1568 aa15.84■□□□□ 0.13
NDUFB3-201ENST00000237889 UGGT1Q9NYU2 1555 aa15.84■□□□□ 0.13
NDUFB3-201ENST00000237889 ZNF772Q68DY9 489 aaPredicted RBP15.84■□□□□ 0.13
NDUFB3-201ENST00000237889 DHX29Q7Z478 1369 aaKnown RBP15.84■□□□□ 0.13
NDUFB3-201ENST00000237889 POLR1AO95602 1720 aaPredicted RBP15.83■□□□□ 0.13
NDUFB3-201ENST00000237889 SYCP2Q9BX26 1530 aa15.83■□□□□ 0.12
NDUFB3-201ENST00000237889 EHMT2Q96KQ7 1210 aa15.82■□□□□ 0.12
NDUFB3-201ENST00000237889 ARHGAP35Q9NRY4 1499 aa15.82■□□□□ 0.12
NDUFB3-201ENST00000237889 DEPDC5O75140 1603 aa15.82■□□□□ 0.12
NDUFB3-201ENST00000237889 EID1Q9Y6B2 187 aa15.81■□□□□ 0.12
NDUFB3-201ENST00000237889 GPATCH8Q9UKJ3 1502 aaKnown RBP15.8■□□□□ 0.12
NDUFB3-201ENST00000237889 CCNB3Q8WWL7 1395 aa15.8■□□□□ 0.12
NDUFB3-201ENST00000237889 MEX3CQ5U5Q3 659 aaKnown RBP15.8■□□□□ 0.12
NDUFB3-201ENST00000237889 TRIM52Q96A61 297 aa15.8■□□□□ 0.12
NDUFB3-201ENST00000237889 SYNMO15061 1565 aa15.79■□□□□ 0.12
NDUFB3-201ENST00000237889 MAPK8IP2Q13387 824 aaPredicted RBP15.79■□□□□ 0.12
NDUFB3-201ENST00000237889 TXNDC2Q86VQ3 553 aa15.79■□□□□ 0.12
NDUFB3-201ENST00000237889 RTEL1-TNFRSF6BF6WH68 1400 aa15.77■□□□□ 0.12
NDUFB3-201ENST00000237889 JCADQ9P266 1359 aa15.77■□□□□ 0.12
NDUFB3-201ENST00000237889 RXRBP28702 533 aa15.77■□□□□ 0.12
NDUFB3-201ENST00000237889 KDM5DQ9BY66 1539 aa15.77■□□□□ 0.11
NDUFB3-201ENST00000237889 CASKIN1Q8WXD9 1431 aa15.77■□□□□ 0.11
NDUFB3-201ENST00000237889 RSPH4AQ5TD94 716 aa15.76■□□□□ 0.11
NDUFB3-201ENST00000237889 IQGAP1P46940 1657 aa15.76■□□□□ 0.11
NDUFB3-201ENST00000237889 INO80Q9ULG1 1556 aaPredicted RBP15.75■□□□□ 0.11
NDUFB3-201ENST00000237889 PROSER2Q86WR7 435 aaPredicted RBP15.74■□□□□ 0.11
NDUFB3-201ENST00000237889 TMEM94Q12767 1356 aa15.73■□□□□ 0.11
NDUFB3-201ENST00000237889 SPATA31A6Q5VVP1 1343 aa15.72■□□□□ 0.11
NDUFB3-201ENST00000237889 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
NDUFB3-201ENST00000237889 SLAIN2Q9P270 581 aa15.72■□□□□ 0.11
NDUFB3-201ENST00000237889 SCAF11Q99590 1463 aaKnown RBP15.71■□□□□ 0.11
NDUFB3-201ENST00000237889 KCNA6P17658 529 aa15.71■□□□□ 0.11
NDUFB3-201ENST00000237889 ADGBQ8N7X0 1667 aa15.7■□□□□ 0.1
NDUFB3-201ENST00000237889 LTKP29376 864 aa15.7■□□□□ 0.1
NDUFB3-201ENST00000237889 SRCAPQ6ZRS2 3230 aa15.7■□□□□ 0.1
NDUFB3-201ENST00000237889 LRRC9Q6ZRR7 1453 aa15.7■□□□□ 0.1
NDUFB3-201ENST00000237889 CDC42BPAQ5VT25 1732 aa15.69■□□□□ 0.1
NDUFB3-201ENST00000237889 TSPY4P0CV99 314 aa15.69■□□□□ 0.1
NDUFB3-201ENST00000237889 TSPY10P0CW01 314 aa15.69■□□□□ 0.1
NDUFB3-201ENST00000237889 STAG3Q9UJ98 1225 aa15.69■□□□□ 0.1
NDUFB3-201ENST00000237889 ZNF644Q9H582 1327 aaPredicted RBP15.68■□□□□ 0.1
NDUFB3-201ENST00000237889 MSH6P52701 1360 aa15.67■□□□□ 0.1
NDUFB3-201ENST00000237889 MTUS2Q5JR59 1369 aa15.66■□□□□ 0.1
NDUFB3-201ENST00000237889 ZRANB1Q9UGI0 708 aa15.66■□□□□ 0.1
NDUFB3-201ENST00000237889 SETD1AO15047 1707 aaKnown RBP15.64■□□□□ 0.09
NDUFB3-201ENST00000237889 STRCP1A6NGW2 1772 aa15.64■□□□□ 0.09
NDUFB3-201ENST00000237889 MBD5Q9P267 1494 aa15.64■□□□□ 0.09
NDUFB3-201ENST00000237889 RBM33Q96EV2 1170 aaKnown RBP15.62■□□□□ 0.09
NDUFB3-201ENST00000237889 BCANQ96GW7 911 aa15.62■□□□□ 0.09
NDUFB3-201ENST00000237889 FYCO1Q9BQS8 1478 aa15.62■□□□□ 0.09
NDUFB3-201ENST00000237889 FGD6Q6ZV73 1430 aa15.61■□□□□ 0.09
NDUFB3-201ENST00000237889 CDK12Q9NYV4 1490 aaPredicted RBP15.61■□□□□ 0.09
NDUFB3-201ENST00000237889 NUTM2BA6NNL0 878 aaPredicted RBP15.6■□□□□ 0.09
NDUFB3-201ENST00000237889 NUTM2EB1AL46 878 aaPredicted RBP15.6■□□□□ 0.09
NDUFB3-201ENST00000237889 NUTM2DQ5VT03 806 aaPredicted RBP15.6■□□□□ 0.09
NDUFB3-201ENST00000237889 NUTM2AQ8IVF1 878 aaPredicted RBP15.6■□□□□ 0.09
NDUFB3-201ENST00000237889 SLC26A8Q96RN1 970 aa15.6■□□□□ 0.09
NDUFB3-201ENST00000237889 ROBO1Q9Y6N7 1651 aa15.6■□□□□ 0.09
NDUFB3-201ENST00000237889 ERVK-7P63135 1459 aa15.59■□□□□ 0.09
NDUFB3-201ENST00000237889 C14orf37Q86TY3 774 aa15.58■□□□□ 0.08
NDUFB3-201ENST00000237889 TMEM2Q9UHN6 1383 aa15.58■□□□□ 0.08
NDUFB3-201ENST00000237889 CCDC141Q6ZP82 1450 aa15.58■□□□□ 0.08
NDUFB3-201ENST00000237889 ARHGAP23Q9P227 1491 aa15.58■□□□□ 0.08
NDUFB3-201ENST00000237889 SLIT1O75093 1534 aa15.58■□□□□ 0.08
NDUFB3-201ENST00000237889 LRRIQ1Q96JM4 1722 aa15.57■□□□□ 0.08
NDUFB3-201ENST00000237889 RBM6P78332 1123 aaKnown RBP15.57■□□□□ 0.08
NDUFB3-201ENST00000237889 NGLY1Q96IV0 654 aa15.56■□□□□ 0.08
NDUFB3-201ENST00000237889 ZC3H13Q5T200 1668 aaKnown RBP15.55■□□□□ 0.08
NDUFB3-201ENST00000237889 CADPS2Q86UW7 1296 aa15.55■□□□□ 0.08
NDUFB3-201ENST00000237889 QTRT2Q9H974 415 aaKnown RBP15.55■□□□□ 0.08
NDUFB3-201ENST00000237889 PRDM15P57071 1507 aaPredicted RBP15.54■□□□□ 0.08
NDUFB3-201ENST00000237889 NCOA2Q15596 1464 aa15.54■□□□□ 0.08
NDUFB3-201ENST00000237889 AFF2P51816 1311 aa15.54■□□□□ 0.08
NDUFB3-201ENST00000237889 ATF3P18847 181 aa15.54■□□□□ 0.08
NDUFB3-201ENST00000237889 HDGFP51858 240 aaKnown RBP15.53■□□□□ 0.08
NDUFB3-201ENST00000237889 ABCC3O15438 1527 aa15.53■□□□□ 0.08
NDUFB3-201ENST00000237889 NKTRP30414 1462 aaKnown RBP15.52■□□□□ 0.07
NDUFB3-201ENST00000237889 PHLPP1O60346 1717 aa15.51■□□□□ 0.07
NDUFB3-201ENST00000237889 ATAD2Q6PL18 1390 aa15.51■□□□□ 0.07
NDUFB3-201ENST00000237889 LRP6O75581 1613 aa15.51■□□□□ 0.07
NDUFB3-201ENST00000237889 CCDC125Q86Z20 511 aa15.51■□□□□ 0.07
NDUFB3-201ENST00000237889 MAP3K1Q13233 1512 aa15.5■□□□□ 0.07
NDUFB3-201ENST00000237889 C19orf44Q9H6X5 657 aa15.5■□□□□ 0.07
NDUFB3-201ENST00000237889 NCOA3Q9Y6Q9 1424 aa15.49■□□□□ 0.07
NDUFB3-201ENST00000237889 C8orf37Q96NL8 207 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms