RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 OTUD5Q96G74 571 aa14.75□□□□□ -0.05
TTC1-201ENST00000231238 PHF8Q9UPP1 1060 aa14.75□□□□□ -0.05
TTC1-201ENST00000231238 CFAP43Q8NDM7 1665 aa14.75□□□□□ -0.05
TTC1-201ENST00000231238 CCDC18Q5T9S5 1454 aa14.74□□□□□ -0.05
TTC1-201ENST00000231238 MS4A4AQ96JQ5 239 aa14.71□□□□□ -0.05
TTC1-201ENST00000231238 MFRPQ9BY79 579 aa14.71□□□□□ -0.05
TTC1-201ENST00000231238 CDK11AQ9UQ88 783 aaPredicted RBP14.7□□□□□ -0.06
TTC1-201ENST00000231238 PTPRGP23470 1445 aa14.7□□□□□ -0.06
TTC1-201ENST00000231238 FBXO22Q8NEZ5 403 aa14.69□□□□□ -0.06
TTC1-201ENST00000231238 RAPGEF6Q8TEU7 1601 aa14.69□□□□□ -0.06
TTC1-201ENST00000231238 EPRSP07814 1512 aaKnown RBP14.68□□□□□ -0.06
TTC1-201ENST00000231238 CLASP1Q7Z460 1538 aa14.66□□□□□ -0.06
TTC1-201ENST00000231238 PLB1Q6P1J6 1458 aa14.66□□□□□ -0.06
TTC1-201ENST00000231238 SHROOM2Q13796 1616 aa14.66□□□□□ -0.06
TTC1-201ENST00000231238 CDK13Q14004 1512 aaKnown RBP14.66□□□□□ -0.06
TTC1-201ENST00000231238 DNAJC5Q9H3Z4 198 aa14.65□□□□□ -0.06
TTC1-201ENST00000231238 EHBP1L1Q8N3D4 1523 aa14.65□□□□□ -0.06
TTC1-201ENST00000231238 NLRP6P59044 892 aa14.64□□□□□ -0.07
TTC1-201ENST00000231238 NKX1-1Q15270 411 aaPredicted RBP14.64□□□□□ -0.07
TTC1-201ENST00000231238 CCNB3Q8WWL7 1395 aa14.64□□□□□ -0.07
TTC1-201ENST00000231238 NUP153P49790 1475 aaKnown RBP14.63□□□□□ -0.07
TTC1-201ENST00000231238 FAM50AQ14320 339 aaKnown RBP14.63□□□□□ -0.07
TTC1-201ENST00000231238 LRRIQ1Q96JM4 1722 aa14.62□□□□□ -0.07
TTC1-201ENST00000231238 MAMSTRQ6ZN01 415 aa14.62□□□□□ -0.07
TTC1-201ENST00000231238 ITGAEP38570 1179 aa14.61□□□□□ -0.07
TTC1-201ENST00000231238 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
TTC1-201ENST00000231238 SUPT6HQ7KZ85 1726 aaKnown RBP14.61□□□□□ -0.07
TTC1-201ENST00000231238 PHLDB1Q86UU1 1377 aa14.6□□□□□ -0.07
TTC1-201ENST00000231238 RRBP1Q9P2E9 1410 aaKnown RBP14.6□□□□□ -0.07
TTC1-201ENST00000231238 PLEKHD1A6NEE1 506 aa14.59□□□□□ -0.07
TTC1-201ENST00000231238 SCUBE2Q9NQ36 999 aa14.59□□□□□ -0.07
TTC1-201ENST00000231238 ABCA8O94911 1581 aa14.59□□□□□ -0.07
TTC1-201ENST00000231238 UACAQ9BZF9 1416 aa14.59□□□□□ -0.07
TTC1-201ENST00000231238 NCOA2Q15596 1464 aa14.59□□□□□ -0.07
TTC1-201ENST00000231238 ERCC6L2Q5T890 1561 aa14.58□□□□□ -0.08
TTC1-201ENST00000231238 BOLA1Q9Y3E2 137 aa14.57□□□□□ -0.08
TTC1-201ENST00000231238 MAGI3Q5TCQ9 1506 aa14.55□□□□□ -0.08
TTC1-201ENST00000231238 CCER1Q8TC90 406 aaPredicted RBP14.55□□□□□ -0.08
TTC1-201ENST00000231238 TMEM121BQ9BXQ6 578 aaPredicted RBP14.55□□□□□ -0.08
TTC1-201ENST00000231238 MYOM3Q5VTT5 1437 aa14.54□□□□□ -0.08
TTC1-201ENST00000231238 HRCP23327 699 aa14.54□□□□□ -0.08
TTC1-201ENST00000231238 TROQ12816 1431 aaPredicted RBP14.53□□□□□ -0.08
TTC1-201ENST00000231238 FGD6Q6ZV73 1430 aa14.53□□□□□ -0.08
TTC1-201ENST00000231238 ATP10BO94823 1461 aa14.53□□□□□ -0.08
TTC1-201ENST00000231238 PPP1R37O75864 691 aa14.52□□□□□ -0.08
TTC1-201ENST00000231238 MICALL2Q8IY33 904 aa14.51□□□□□ -0.09
TTC1-201ENST00000231238 ABCC2Q92887 1545 aa14.51□□□□□ -0.09
TTC1-201ENST00000231238 ZEB1P37275 1124 aaPredicted RBP14.49□□□□□ -0.09
TTC1-201ENST00000231238 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.49□□□□□ -0.09
TTC1-201ENST00000231238 C3orf67Q6ZVT6 689 aa14.47□□□□□ -0.09
TTC1-201ENST00000231238 SLAIN1Q8ND83 568 aa14.47□□□□□ -0.09
TTC1-201ENST00000231238 G3V3G9 751 aa14.46□□□□□ -0.09
TTC1-201ENST00000231238 GTPBP6O43824 516 aaPredicted RBP14.46□□□□□ -0.09
TTC1-201ENST00000231238 ARHGEF11O15085 1522 aa14.46□□□□□ -0.09
TTC1-201ENST00000231238 KIF14Q15058 1648 aa14.46□□□□□ -0.09
TTC1-201ENST00000231238 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.46□□□□□ -0.09
TTC1-201ENST00000231238 CFDP1Q9UEE9 299 aaPredicted RBP14.45□□□□□ -0.1
TTC1-201ENST00000231238 UHRF1BP1LA0JNW5 1464 aa14.45□□□□□ -0.1
TTC1-201ENST00000231238 MIA2Q96PC5 1412 aa14.45□□□□□ -0.1
TTC1-201ENST00000231238 PTPN23Q9H3S7 1636 aa14.44□□□□□ -0.1
TTC1-201ENST00000231238 ZNF777Q9ULD5 760 aaPredicted RBP14.44□□□□□ -0.1
TTC1-201ENST00000231238 BBXQ8WY36 941 aaPredicted RBP14.43□□□□□ -0.1
TTC1-201ENST00000231238 KCNH8Q96L42 1107 aa14.43□□□□□ -0.1
TTC1-201ENST00000231238 ADCY10Q96PN6 1610 aa14.41□□□□□ -0.1
TTC1-201ENST00000231238 TMEM92Q6UXU6 159 aa14.41□□□□□ -0.1
TTC1-201ENST00000231238 ITSN2Q9NZM3 1697 aa14.4□□□□□ -0.1
TTC1-201ENST00000231238 ZCCHC11Q5TAX3 1644 aaKnown RBP14.39□□□□□ -0.11
TTC1-201ENST00000231238 KDM5BQ9UGL1 1544 aa14.39□□□□□ -0.11
TTC1-201ENST00000231238 TCOF1Q13428 1488 aaKnown RBP14.38□□□□□ -0.11
TTC1-201ENST00000231238 GPATCH8Q9UKJ3 1502 aaKnown RBP14.37□□□□□ -0.11
TTC1-201ENST00000231238 SETD5Q9C0A6 1442 aa14.37□□□□□ -0.11
TTC1-201ENST00000231238 RYDENQ9NUL5 291 aaKnown RBP14.37□□□□□ -0.11
TTC1-201ENST00000231238 CHIC2Q9UKJ5 165 aa14.36□□□□□ -0.11
TTC1-201ENST00000231238 ZNF644Q9H582 1327 aaPredicted RBP14.34□□□□□ -0.11
TTC1-201ENST00000231238 RAB3GAP2Q9H2M9 1393 aa14.34□□□□□ -0.11
TTC1-201ENST00000231238 CAMSAP2Q08AD1 1489 aa14.34□□□□□ -0.11
TTC1-201ENST00000231238 ABCC10Q5T3U5 1492 aa14.34□□□□□ -0.11
TTC1-201ENST00000231238 CYB5RLQ6IPT4 315 aa14.32□□□□□ -0.12
TTC1-201ENST00000231238 ARHGAP5Q13017 1502 aa14.31□□□□□ -0.12
TTC1-201ENST00000231238 WDR7Q9Y4E6 1490 aa14.31□□□□□ -0.12
TTC1-201ENST00000231238 RRP7BPQ9NSQ0 103 aa14.31□□□□□ -0.12
TTC1-201ENST00000231238 DAPK1P53355 1430 aa14.3□□□□□ -0.12
TTC1-201ENST00000231238 CDC42BPAQ5VT25 1732 aa14.29□□□□□ -0.12
TTC1-201ENST00000231238 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.29□□□□□ -0.12
TTC1-201ENST00000231238 PTPRKQ15262 1439 aa14.29□□□□□ -0.12
TTC1-201ENST00000231238 ASXL2Q76L83 1435 aa14.29□□□□□ -0.12
TTC1-201ENST00000231238 TTC37Q6PGP7 1564 aa14.28□□□□□ -0.12
TTC1-201ENST00000231238 TSPY4P0CV99 314 aa14.28□□□□□ -0.12
TTC1-201ENST00000231238 TSPY10P0CW01 314 aa14.28□□□□□ -0.12
TTC1-201ENST00000231238 HFM1A2PYH4 1435 aa14.28□□□□□ -0.12
TTC1-201ENST00000231238 EFCAB2Q5VUJ9 269 aa14.27□□□□□ -0.12
TTC1-201ENST00000231238 PREX2Q70Z35 1606 aa14.27□□□□□ -0.13
TTC1-201ENST00000231238 ABCC5O15440 1437 aa14.27□□□□□ -0.13
TTC1-201ENST00000231238 RIMBP3CA6NJZ7 1639 aa14.26□□□□□ -0.13
TTC1-201ENST00000231238 RIMBP3BA6NNM3 1639 aa14.26□□□□□ -0.13
TTC1-201ENST00000231238 DNMT1P26358 1616 aaKnown RBP14.26□□□□□ -0.13
TTC1-201ENST00000231238 RIMBP3Q9UFD9 1639 aa14.26□□□□□ -0.13
TTC1-201ENST00000231238 KIF3CO14782 793 aa14.26□□□□□ -0.13
TTC1-201ENST00000231238 LCE2DQ5TA82 110 aaPredicted RBP14.26□□□□□ -0.13
TTC1-201ENST00000231238 MYO5CQ9NQX4 1742 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms