RNA–Protein interactions for RNA: ENST00000230538.11

LAMA4-201, Transcript of laminin subunit alpha 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LAMA4, Length 6,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAMA4-201ENST00000230538 KIF3BO15066 747 aa14.38□□□□□ -0.11
LAMA4-201ENST00000230538 NGDNQ8NEJ9 315 aaKnown RBP14.37□□□□□ -0.11
LAMA4-201ENST00000230538 CREBRFQ8IUR6 639 aa14.37□□□□□ -0.11
LAMA4-201ENST00000230538 AMPHP49418 695 aa14.36□□□□□ -0.11
LAMA4-201ENST00000230538 G3V3G9 751 aa14.36□□□□□ -0.11
LAMA4-201ENST00000230538 DCAF8Q5TAQ9 597 aa14.36□□□□□ -0.11
LAMA4-201ENST00000230538 FHOD3Q2V2M9 1422 aa14.36□□□□□ -0.11
LAMA4-201ENST00000230538 ST18O60284 1047 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 EID1Q9Y6B2 187 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 NLRP13Q86W25 1043 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 KIF16BQ96L93 1317 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 A0A0U1RQG5 324 aaPredicted RBP14.35□□□□□ -0.11
LAMA4-201ENST00000230538 PHF14O94880 888 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 PDE3BQ13370 1112 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.35□□□□□ -0.11
LAMA4-201ENST00000230538 GOLGA6L1Q8N7Z2 621 aa14.35□□□□□ -0.11
LAMA4-201ENST00000230538 FOXD4L5Q5VV16 416 aaPredicted RBP14.34□□□□□ -0.11
LAMA4-201ENST00000230538 FOXD4L4Q8WXT5 416 aaPredicted RBP14.34□□□□□ -0.11
LAMA4-201ENST00000230538 TOMM22Q9NS69 142 aa14.34□□□□□ -0.11
LAMA4-201ENST00000230538 LTV1Q96GA3 475 aaPredicted RBP14.34□□□□□ -0.11
LAMA4-201ENST00000230538 PDE4CQ08493 712 aa14.34□□□□□ -0.11
LAMA4-201ENST00000230538 KIF15Q9NS87 1388 aa14.34□□□□□ -0.11
LAMA4-201ENST00000230538 TDRD9Q8NDG6 1382 aaKnown RBP14.33□□□□□ -0.11
LAMA4-201ENST00000230538 SMARCA2P51531 1590 aa14.33□□□□□ -0.11
LAMA4-201ENST00000230538 RRP7AQ9Y3A4 280 aaKnown RBP14.33□□□□□ -0.12
LAMA4-201ENST00000230538 PHLDB1Q86UU1 1377 aa14.33□□□□□ -0.12
LAMA4-201ENST00000230538 FRAT2O75474 233 aaPredicted RBP14.32□□□□□ -0.12
LAMA4-201ENST00000230538 PRM3Q9NNZ6 103 aa14.32□□□□□ -0.12
LAMA4-201ENST00000230538 WASHC2CQ9Y4E1 1318 aa14.31□□□□□ -0.12
LAMA4-201ENST00000230538 KIF3AQ9Y496 699 aa14.31□□□□□ -0.12
LAMA4-201ENST00000230538 SF3A1Q15459 793 aaKnown RBP14.31□□□□□ -0.12
LAMA4-201ENST00000230538 TOP2AP11388 1531 aaKnown RBP14.31□□□□□ -0.12
LAMA4-201ENST00000230538 PLIN1O60240 522 aa14.31□□□□□ -0.12
LAMA4-201ENST00000230538 MYBBP1AQ9BQG0 1328 aaKnown RBP14.31□□□□□ -0.12
LAMA4-201ENST00000230538 TPM3P06753 285 aa14.3□□□□□ -0.12
LAMA4-201ENST00000230538 TNNT3P45378 269 aaPredicted RBP14.3□□□□□ -0.12
LAMA4-201ENST00000230538 PDS5BQ9NTI5 1447 aa14.3□□□□□ -0.12
LAMA4-201ENST00000230538 MARCH6O60337 910 aa14.3□□□□□ -0.12
LAMA4-201ENST00000230538 VPS53Q5VIR6 699 aa14.29□□□□□ -0.12
LAMA4-201ENST00000230538 RAPGEF2Q9Y4G8 1499 aa14.29□□□□□ -0.12
LAMA4-201ENST00000230538 SLC4A3P48751 1232 aa14.29□□□□□ -0.12
LAMA4-201ENST00000230538 TRAK1Q9UPV9 953 aa14.29□□□□□ -0.12
LAMA4-201ENST00000230538 CCDC18Q5T9S5 1454 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 NUTM2FA1L443 756 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 DDX11L8A8MPP1 907 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 H3BQV1 296 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 GTF2E1P29083 439 aaPredicted RBP14.28□□□□□ -0.12
LAMA4-201ENST00000230538 IFFO2Q5TF58 517 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 RILPL2Q969X0 211 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 PANK3Q9H999 370 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 CEP89Q96ST8 783 aa14.28□□□□□ -0.12
LAMA4-201ENST00000230538 RSPH4AQ5TD94 716 aa14.26□□□□□ -0.13
LAMA4-201ENST00000230538 DHX57Q6P158 1386 aaKnown RBP14.26□□□□□ -0.13
LAMA4-201ENST00000230538 USP35Q9P2H5 1018 aa14.26□□□□□ -0.13
LAMA4-201ENST00000230538 TPD52L1Q16890 204 aaPredicted RBP14.26□□□□□ -0.13
LAMA4-201ENST00000230538 ANKRD45Q5TZF3 282 aa14.26□□□□□ -0.13
LAMA4-201ENST00000230538 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
LAMA4-201ENST00000230538 CRBNQ96SW2 442 aa14.26□□□□□ -0.13
LAMA4-201ENST00000230538 BCL2L13Q9BXK5 485 aa14.26□□□□□ -0.13
LAMA4-201ENST00000230538 PES1O00541 588 aaKnown RBP14.25□□□□□ -0.13
LAMA4-201ENST00000230538 CENPQQ7L2Z9 268 aaPredicted RBP14.25□□□□□ -0.13
LAMA4-201ENST00000230538 FAM184AQ8NB25 1140 aa14.25□□□□□ -0.13
LAMA4-201ENST00000230538 ST20-MTHFSA0A0A6YYL1 179 aa14.24□□□□□ -0.13
LAMA4-201ENST00000230538 PDE4AP27815 886 aa14.24□□□□□ -0.13
LAMA4-201ENST00000230538 RRP1P56182 461 aaKnown RBP14.24□□□□□ -0.13
LAMA4-201ENST00000230538 FAM161AQ3B820 660 aa14.23□□□□□ -0.13
LAMA4-201ENST00000230538 C1orf141Q5JVX7 400 aa14.23□□□□□ -0.13
LAMA4-201ENST00000230538 ELL2O00472 640 aaPredicted RBP14.23□□□□□ -0.13
LAMA4-201ENST00000230538 CCDC144AA2RUR9 1427 aa14.22□□□□□ -0.13
LAMA4-201ENST00000230538 COG3Q96JB2 828 aa14.22□□□□□ -0.13
LAMA4-201ENST00000230538 AKAP17AQ02040 695 aaKnown RBP14.22□□□□□ -0.13
LAMA4-201ENST00000230538 CHMP4CQ96CF2 233 aa14.22□□□□□ -0.13
LAMA4-201ENST00000230538 GOLGA6L19H0YKK7 550 aa14.22□□□□□ -0.13
LAMA4-201ENST00000230538 TSR1Q2NL82 804 aaKnown RBP14.22□□□□□ -0.13
LAMA4-201ENST00000230538 ZKSCAN2Q63HK3 967 aa14.22□□□□□ -0.13
LAMA4-201ENST00000230538 UACAQ9BZF9 1416 aa14.21□□□□□ -0.13
LAMA4-201ENST00000230538 ATP6V1DQ9Y5K8 247 aa14.21□□□□□ -0.13
LAMA4-201ENST00000230538 E9PSI1 815 aa14.21□□□□□ -0.13
LAMA4-201ENST00000230538 FOXD4L6Q3SYB3 417 aaPredicted RBP14.21□□□□□ -0.13
LAMA4-201ENST00000230538 FOXD4L3Q6VB84 417 aaPredicted RBP14.21□□□□□ -0.13
LAMA4-201ENST00000230538 DDX49Q9Y6V7 483 aaKnown RBP14.21□□□□□ -0.14
LAMA4-201ENST00000230538 CGNL1Q0VF96 1302 aa14.21□□□□□ -0.14
LAMA4-201ENST00000230538 TPM2P07951 284 aa14.2□□□□□ -0.14
LAMA4-201ENST00000230538 SKOR2Q2VWA4 1001 aaPredicted RBP14.19□□□□□ -0.14
LAMA4-201ENST00000230538 SYNE3Q6ZMZ3 975 aa14.19□□□□□ -0.14
LAMA4-201ENST00000230538 DIAPH3Q9NSV4 1193 aa14.19□□□□□ -0.14
LAMA4-201ENST00000230538 BECN2A8MW95 431 aa14.19□□□□□ -0.14
LAMA4-201ENST00000230538 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
LAMA4-201ENST00000230538 MCTP1Q6DN14 999 aa14.18□□□□□ -0.14
LAMA4-201ENST00000230538 USP47Q96K76 1375 aa14.18□□□□□ -0.14
LAMA4-201ENST00000230538 COG6Q9Y2V7 657 aa14.18□□□□□ -0.14
LAMA4-201ENST00000230538 ZBED9Q6R2W3 1325 aa14.18□□□□□ -0.14
LAMA4-201ENST00000230538 TPM1P09493 284 aa14.17□□□□□ -0.14
LAMA4-201ENST00000230538 PRKRIP1Q9H875 184 aaPredicted RBP14.17□□□□□ -0.14
LAMA4-201ENST00000230538 ANO8Q9HCE9 1232 aaPredicted RBP14.17□□□□□ -0.14
LAMA4-201ENST00000230538 EVA1CP58658 441 aa14.17□□□□□ -0.14
LAMA4-201ENST00000230538 LRRFIP1Q32MZ4 808 aaKnown RBP14.17□□□□□ -0.14
LAMA4-201ENST00000230538 CCAR2Q8N163 923 aaKnown RBP14.17□□□□□ -0.14
LAMA4-201ENST00000230538 RUSC2Q8N2Y8 1516 aa14.17□□□□□ -0.14
LAMA4-201ENST00000230538 TEFQ10587 303 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms