RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 FBXO31Q5XUX0 539 aaPredicted RBP22.07■■□□□ 1.12
GPN3-201ENST00000228827 CHIC2Q9UKJ5 165 aa22.06■■□□□ 1.12
GPN3-201ENST00000228827 DMRT2Q9Y5R5 561 aa22.06■■□□□ 1.12
GPN3-201ENST00000228827 KIF15Q9NS87 1388 aa22.06■■□□□ 1.12
GPN3-201ENST00000228827 SHANK2Q9UPX8 1470 aa22.06■■□□□ 1.12
GPN3-201ENST00000228827 FAM50AQ14320 339 aaKnown RBP22.05■■□□□ 1.12
GPN3-201ENST00000228827 STRCQ7RTU9 1775 aa22.04■■□□□ 1.12
GPN3-201ENST00000228827 DUOX2Q9NRD8 1548 aa22.04■■□□□ 1.12
GPN3-201ENST00000228827 DNMT1P26358 1616 aaKnown RBP22.03■■□□□ 1.12
GPN3-201ENST00000228827 MYO3AQ8NEV4 1616 aa22.03■■□□□ 1.12
GPN3-201ENST00000228827 FAM135AQ9P2D6 1515 aa22.03■■□□□ 1.12
GPN3-201ENST00000228827 CROCC2H7BZ55 1655 aa22.02■■□□□ 1.12
GPN3-201ENST00000228827 PZPP20742 1482 aa22.02■■□□□ 1.12
GPN3-201ENST00000228827 NCOA1Q15788 1441 aa22.02■■□□□ 1.12
GPN3-201ENST00000228827 PPARGC1BQ86YN6 1023 aaKnown RBP22.02■■□□□ 1.12
GPN3-201ENST00000228827 CAMSAP1Q5T5Y3 1602 aa22.02■■□□□ 1.11
GPN3-201ENST00000228827 TNRQ92752 1358 aa22.01■■□□□ 1.11
GPN3-201ENST00000228827 RNF17Q9BXT8 1623 aaKnown RBP22.01■■□□□ 1.11
GPN3-201ENST00000228827 EIF2AK4Q9P2K8 1649 aaKnown RBP22■■□□□ 1.11
GPN3-201ENST00000228827 CEP170BQ9Y4F5 1589 aaPredicted RBP21.99■■□□□ 1.11
GPN3-201ENST00000228827 NCKAP5LQ9HCH0 1330 aa21.99■■□□□ 1.11
GPN3-201ENST00000228827 FBXO41Q8TF61 875 aa21.99■■□□□ 1.11
GPN3-201ENST00000228827 ABCC3O15438 1527 aa21.98■■□□□ 1.11
GPN3-201ENST00000228827 ANKRD30AQ9BXX3 1397 aa21.98■■□□□ 1.11
GPN3-201ENST00000228827 PTPRTO14522 1441 aa21.97■■□□□ 1.11
GPN3-201ENST00000228827 ERBINQ96RT1 1412 aa21.97■■□□□ 1.11
GPN3-201ENST00000228827 CERKQ8TCT0 537 aa21.96■■□□□ 1.11
GPN3-201ENST00000228827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.96■■□□□ 1.119e-6■■■□□ 18.9
GPN3-201ENST00000228827 ZNF142P52746 1687 aaPredicted RBP21.96■■□□□ 1.11
GPN3-201ENST00000228827 MROH1Q8NDA8 1641 aa21.96■■□□□ 1.11
GPN3-201ENST00000228827 A2ML1A8K2U0 1454 aa21.96■■□□□ 1.11
GPN3-201ENST00000228827 ZC3H13Q5T200 1668 aaKnown RBP21.92■■□□□ 1.1
GPN3-201ENST00000228827 PLA2R1Q13018 1463 aa21.92■■□□□ 1.1
GPN3-201ENST00000228827 PKD2Q13563 968 aa21.9■■□□□ 1.1
GPN3-201ENST00000228827 PRDM15P57071 1507 aaPredicted RBP21.89■■□□□ 1.09
GPN3-201ENST00000228827 ADGRL2O95490 1459 aa21.89■■□□□ 1.09
GPN3-201ENST00000228827 CEP152O94986 1710 aa21.88■■□□□ 1.09
GPN3-201ENST00000228827 ERVK-7P63135 1459 aa21.88■■□□□ 1.09
GPN3-201ENST00000228827 KANK1Q14678 1352 aa21.87■■□□□ 1.09
GPN3-201ENST00000228827 NLRP1Q9C000 1473 aa21.87■■□□□ 1.09
GPN3-201ENST00000228827 SPATA31D1Q6ZQQ2 1576 aa21.85■■□□□ 1.09
GPN3-201ENST00000228827 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.85■■□□□ 1.09
GPN3-201ENST00000228827 ITGAEP38570 1179 aa21.84■■□□□ 1.09
GPN3-201ENST00000228827 UGGT1Q9NYU2 1555 aa21.84■■□□□ 1.09
GPN3-201ENST00000228827 THEMISQ8N1K5 641 aaPredicted RBP21.83■■□□□ 1.09
GPN3-201ENST00000228827 DEPDC5O75140 1603 aa21.83■■□□□ 1.08
GPN3-201ENST00000228827 ANKRD50Q9ULJ7 1429 aa21.82■■□□□ 1.08
GPN3-201ENST00000228827 ZNF335Q9H4Z2 1342 aaPredicted RBP21.82■■□□□ 1.08
GPN3-201ENST00000228827 ARHGAP31Q2M1Z3 1444 aa21.81■■□□□ 1.08
GPN3-201ENST00000228827 ANKLE2Q86XL3 938 aa21.8■■□□□ 1.08
GPN3-201ENST00000228827 LTBP4Q8N2S1 1624 aa21.79■■□□□ 1.08
GPN3-201ENST00000228827 VWDEQ8N2E2 1590 aa21.77■■□□□ 1.08
GPN3-201ENST00000228827 LMTK2Q8IWU2 1503 aa21.76■■□□□ 1.07
GPN3-201ENST00000228827 NEURL4Q96JN8 1562 aa21.76■■□□□ 1.07
GPN3-201ENST00000228827 ROCK1Q13464 1354 aa21.75■■□□□ 1.07
GPN3-201ENST00000228827 NPHP4O75161 1426 aaPredicted RBP21.72■■□□□ 1.07
GPN3-201ENST00000228827 POLR1AO95602 1720 aaPredicted RBP21.72■■□□□ 1.07
GPN3-201ENST00000228827 EFCAB6Q5THR3 1501 aa21.71■■□□□ 1.07
GPN3-201ENST00000228827 CFAP65Q6ZU64 1925 aaKnown RBP21.7■■□□□ 1.06
GPN3-201ENST00000228827 STAG3Q9UJ98 1225 aa21.7■■□□□ 1.06
GPN3-201ENST00000228827 MED14O60244 1454 aa21.68■■□□□ 1.06
GPN3-201ENST00000228827 UBR1Q8IWV7 1749 aa21.67■■□□□ 1.06
GPN3-201ENST00000228827 IDI1Q13907 227 aa21.67■■□□□ 1.06
GPN3-201ENST00000228827 NOS1P29475 1434 aa21.66■■□□□ 1.06
GPN3-201ENST00000228827 RRBP1Q9P2E9 1410 aaKnown RBP21.66■■□□□ 1.06
GPN3-201ENST00000228827 PIK3C2BO00750 1634 aa21.66■■□□□ 1.06
GPN3-201ENST00000228827 IQSEC2Q5JU85 1478 aa21.65■■□□□ 1.06
GPN3-201ENST00000228827 LTKP29376 864 aa21.65■■□□□ 1.06
GPN3-201ENST00000228827 TXNDC2Q86VQ3 553 aa21.65■■□□□ 1.06
GPN3-201ENST00000228827 SYNMO15061 1565 aa21.65■■□□□ 1.06
GPN3-201ENST00000228827 UNC13BO14795 1591 aa21.64■■□□□ 1.06
GPN3-201ENST00000228827 SCAF11Q99590 1463 aaKnown RBP21.63■■□□□ 1.05
GPN3-201ENST00000228827 ARHGAP23Q9P227 1491 aa21.62■■□□□ 1.05
GPN3-201ENST00000228827 EID1Q9Y6B2 187 aa21.62■■□□□ 1.05
GPN3-201ENST00000228827 NUP155O75694 1391 aa21.62■■□□□ 1.05
GPN3-201ENST00000228827 RPRD2Q5VT52 1461 aaKnown RBP21.62■■□□□ 1.05
GPN3-201ENST00000228827 SLIT1O75093 1534 aa21.62■■□□□ 1.05
GPN3-201ENST00000228827 IQGAP1P46940 1657 aa21.61■■□□□ 1.05
GPN3-201ENST00000228827 TMEM2Q9UHN6 1383 aa21.61■■□□□ 1.05
GPN3-201ENST00000228827 UBAP1LF5GYI3 381 aa21.6■■□□□ 1.05
GPN3-201ENST00000228827 TET3O43151 1660 aa21.6■■□□□ 1.05
GPN3-201ENST00000228827 SLC52A1Q9NWF4 448 aa21.6■■□□□ 1.05
GPN3-201ENST00000228827 CPS1P31327 1500 aa21.57■■□□□ 1.04
GPN3-201ENST00000228827 ADGRB3O60242 1522 aa21.56■■□□□ 1.04
GPN3-201ENST00000228827 IQGAP3Q86VI3 1631 aa21.55■■□□□ 1.04
GPN3-201ENST00000228827 GCC2Q8IWJ2 1684 aa21.54■■□□□ 1.04
GPN3-201ENST00000228827 CHGAP10645 457 aaKnown RBP21.54■■□□□ 1.04
GPN3-201ENST00000228827 NAIPQ13075 1403 aa21.52■■□□□ 1.04
GPN3-201ENST00000228827 SENP3Q9H4L4 574 aaPredicted RBP21.52■■□□□ 1.04
GPN3-201ENST00000228827 E9PCH4 1651 aa21.52■■□□□ 1.04
GPN3-201ENST00000228827 KDM5AP29375 1690 aaKnown RBP21.52■■□□□ 1.03
GPN3-201ENST00000228827 SCAF1Q9H7N4 1312 aaKnown RBP21.49■■□□□ 1.03
GPN3-201ENST00000228827 BCANQ96GW7 911 aa21.49■■□□□ 1.03
GPN3-201ENST00000228827 SLC26A8Q96RN1 970 aa21.49■■□□□ 1.03
GPN3-201ENST00000228827 PIP4K2BP78356 416 aa21.48■■□□□ 1.03
GPN3-201ENST00000228827 LRRC7Q96NW7 1537 aa21.46■■□□□ 1.03
GPN3-201ENST00000228827 PPP1R15AO75807 674 aaPredicted RBP21.46■■□□□ 1.03
GPN3-201ENST00000228827 RIMS2Q9UQ26 1411 aa21.46■■□□□ 1.03
GPN3-201ENST00000228827 STRCP1A6NGW2 1772 aa21.46■■□□□ 1.03
GPN3-201ENST00000228827 TOM1O60784 492 aa21.45■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 312.3 ms