RNA–Protein interactions for RNA: ENST00000226524.3

PF4V1-201, Transcript of platelet factor 4 variant 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PF4V1, Length 522 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PF4V1-201ENST00000226524 NCOA1Q15788 1441 aa16.73■□□□□ 0.27
PF4V1-201ENST00000226524 STRCQ7RTU9 1775 aa16.72■□□□□ 0.27
PF4V1-201ENST00000226524 EIF2AK4Q9P2K8 1649 aaKnown RBP16.71■□□□□ 0.27
PF4V1-201ENST00000226524 PLA2R1Q13018 1463 aa16.71■□□□□ 0.27
PF4V1-201ENST00000226524 ZNF142P52746 1687 aaPredicted RBP16.71■□□□□ 0.27
PF4V1-201ENST00000226524 CAMSAP1Q5T5Y3 1602 aa16.7■□□□□ 0.26
PF4V1-201ENST00000226524 MYO3AQ8NEV4 1616 aa16.7■□□□□ 0.26
PF4V1-201ENST00000226524 CEP170BQ9Y4F5 1589 aaPredicted RBP16.7■□□□□ 0.26
PF4V1-201ENST00000226524 PZPP20742 1482 aa16.7■□□□□ 0.26
PF4V1-201ENST00000226524 SHANK2Q9UPX8 1470 aa16.7■□□□□ 0.26
PF4V1-201ENST00000226524 DUOX2Q9NRD8 1548 aa16.7■□□□□ 0.26
PF4V1-201ENST00000226524 TNRQ92752 1358 aa16.69■□□□□ 0.26
PF4V1-201ENST00000226524 PTPN23Q9H3S7 1636 aa16.69■□□□□ 0.26
PF4V1-201ENST00000226524 A2ML1A8K2U0 1454 aa16.68■□□□□ 0.26
PF4V1-201ENST00000226524 FGD6Q6ZV73 1430 aa16.68■□□□□ 0.26
PF4V1-201ENST00000226524 ZC3H13Q5T200 1668 aaKnown RBP16.68■□□□□ 0.26
PF4V1-201ENST00000226524 RNF17Q9BXT8 1623 aaKnown RBP16.67■□□□□ 0.26
PF4V1-201ENST00000226524 THEMISQ8N1K5 641 aaPredicted RBP16.66■□□□□ 0.26
PF4V1-201ENST00000226524 KIF15Q9NS87 1388 aa16.65■□□□□ 0.26
PF4V1-201ENST00000226524 ERBINQ96RT1 1412 aa16.65■□□□□ 0.26
PF4V1-201ENST00000226524 TCOF1Q13428 1488 aaKnown RBP16.65■□□□□ 0.26
PF4V1-201ENST00000226524 NLRP1Q9C000 1473 aa16.65■□□□□ 0.26
PF4V1-201ENST00000226524 ANKRD30AQ9BXX3 1397 aa16.64■□□□□ 0.26
PF4V1-201ENST00000226524 ABCC5O15440 1437 aa16.64■□□□□ 0.25
PF4V1-201ENST00000226524 DAPK1P53355 1430 aa16.64■□□□□ 0.25
PF4V1-201ENST00000226524 KANK1Q14678 1352 aa16.64■□□□□ 0.25
PF4V1-201ENST00000226524 IQSEC2Q5JU85 1478 aa16.63■□□□□ 0.25
PF4V1-201ENST00000226524 DNMT1P26358 1616 aaKnown RBP16.63■□□□□ 0.25
PF4V1-201ENST00000226524 FBXO31Q5XUX0 539 aaPredicted RBP16.62■□□□□ 0.25
PF4V1-201ENST00000226524 RRP7BPQ9NSQ0 103 aa16.62■□□□□ 0.25
PF4V1-201ENST00000226524 NCKAP5LQ9HCH0 1330 aa16.62■□□□□ 0.25
PF4V1-201ENST00000226524 CROCC2H7BZ55 1655 aa16.62■□□□□ 0.25
PF4V1-201ENST00000226524 ANKLE2Q86XL3 938 aa16.61■□□□□ 0.25
PF4V1-201ENST00000226524 ABCC3O15438 1527 aa16.6■□□□□ 0.25
PF4V1-201ENST00000226524 FAM50AQ14320 339 aaKnown RBP16.58■□□□□ 0.24
PF4V1-201ENST00000226524 UGGT1Q9NYU2 1555 aa16.58■□□□□ 0.24
PF4V1-201ENST00000226524 SPATA31D1Q6ZQQ2 1576 aa16.56■□□□□ 0.24
PF4V1-201ENST00000226524 PRDM15P57071 1507 aaPredicted RBP16.56■□□□□ 0.24
PF4V1-201ENST00000226524 ARHGAP31Q2M1Z3 1444 aa16.56■□□□□ 0.24
PF4V1-201ENST00000226524 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
PF4V1-201ENST00000226524 CHIC2Q9UKJ5 165 aa16.55■□□□□ 0.24
PF4V1-201ENST00000226524 LTBP4Q8N2S1 1624 aa16.55■□□□□ 0.24
PF4V1-201ENST00000226524 ERVK-7P63135 1459 aa16.54■□□□□ 0.24
PF4V1-201ENST00000226524 MROH1Q8NDA8 1641 aa16.54■□□□□ 0.24
PF4V1-201ENST00000226524 ADGRL2O95490 1459 aa16.54■□□□□ 0.24
PF4V1-201ENST00000226524 POLR1AO95602 1720 aaPredicted RBP16.53■□□□□ 0.24
PF4V1-201ENST00000226524 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP16.52■□□□□ 0.24
PF4V1-201ENST00000226524 DEPDC5O75140 1603 aa16.52■□□□□ 0.23
PF4V1-201ENST00000226524 ZNF335Q9H4Z2 1342 aaPredicted RBP16.51■□□□□ 0.23
PF4V1-201ENST00000226524 CEP152O94986 1710 aa16.51■□□□□ 0.23
PF4V1-201ENST00000226524 STAG3Q9UJ98 1225 aa16.5■□□□□ 0.23
PF4V1-201ENST00000226524 MED14O60244 1454 aa16.49■□□□□ 0.23
PF4V1-201ENST00000226524 CPS1P31327 1500 aa16.49■□□□□ 0.23
PF4V1-201ENST00000226524 LMTK2Q8IWU2 1503 aa16.49■□□□□ 0.23
PF4V1-201ENST00000226524 NPHP4O75161 1426 aaPredicted RBP16.48■□□□□ 0.23
PF4V1-201ENST00000226524 ANKRD50Q9ULJ7 1429 aa16.48■□□□□ 0.23
PF4V1-201ENST00000226524 EID1Q9Y6B2 187 aa16.48■□□□□ 0.23
PF4V1-201ENST00000226524 UBAP1LF5GYI3 381 aa16.45■□□□□ 0.22
PF4V1-201ENST00000226524 ROCK1Q13464 1354 aa16.45■□□□□ 0.22
PF4V1-201ENST00000226524 NEURL4Q96JN8 1562 aa16.45■□□□□ 0.22
PF4V1-201ENST00000226524 RPRD2Q5VT52 1461 aaKnown RBP16.44■□□□□ 0.22
PF4V1-201ENST00000226524 SLC52A1Q9NWF4 448 aa16.44■□□□□ 0.22
PF4V1-201ENST00000226524 VWDEQ8N2E2 1590 aa16.43■□□□□ 0.22
PF4V1-201ENST00000226524 CFAP65Q6ZU64 1925 aaKnown RBP16.43■□□□□ 0.22
PF4V1-201ENST00000226524 TOM1O60784 492 aa16.43■□□□□ 0.22
PF4V1-201ENST00000226524 IQGAP1P46940 1657 aa16.43■□□□□ 0.22
PF4V1-201ENST00000226524 SCAF11Q99590 1463 aaKnown RBP16.42■□□□□ 0.22
PF4V1-201ENST00000226524 UBR1Q8IWV7 1749 aa16.42■□□□□ 0.22
PF4V1-201ENST00000226524 HDGFP51858 240 aaKnown RBP16.42■□□□□ 0.22
PF4V1-201ENST00000226524 TXNDC2Q86VQ3 553 aa16.42■□□□□ 0.22
PF4V1-201ENST00000226524 SLIT1O75093 1534 aa16.41■□□□□ 0.22
PF4V1-201ENST00000226524 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
PF4V1-201ENST00000226524 EFCAB6Q5THR3 1501 aa16.4■□□□□ 0.22
PF4V1-201ENST00000226524 ARHGAP23Q9P227 1491 aa16.39■□□□□ 0.21
PF4V1-201ENST00000226524 TMEM2Q9UHN6 1383 aa16.38■□□□□ 0.21
PF4V1-201ENST00000226524 NOS1P29475 1434 aa16.37■□□□□ 0.21
PF4V1-201ENST00000226524 IDI1Q13907 227 aa16.37■□□□□ 0.21
PF4V1-201ENST00000226524 PIK3C2BO00750 1634 aa16.36■□□□□ 0.21
PF4V1-201ENST00000226524 TET3O43151 1660 aa16.36■□□□□ 0.21
PF4V1-201ENST00000226524 UNC13BO14795 1591 aa16.34■□□□□ 0.21
PF4V1-201ENST00000226524 LTKP29376 864 aa16.34■□□□□ 0.21
PF4V1-201ENST00000226524 ITGAEP38570 1179 aa16.34■□□□□ 0.21
PF4V1-201ENST00000226524 SCAF1Q9H7N4 1312 aaKnown RBP16.33■□□□□ 0.2
PF4V1-201ENST00000226524 SYNMO15061 1565 aa16.33■□□□□ 0.2
PF4V1-201ENST00000226524 GCC2Q8IWJ2 1684 aa16.33■□□□□ 0.2
PF4V1-201ENST00000226524 ADGRB3O60242 1522 aa16.32■□□□□ 0.2
PF4V1-201ENST00000226524 NUP155O75694 1391 aa16.31■□□□□ 0.2
PF4V1-201ENST00000226524 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.31■□□□□ 0.2
PF4V1-201ENST00000226524 BCANQ96GW7 911 aa16.3■□□□□ 0.2
PF4V1-201ENST00000226524 DISP3Q9P2K9 1392 aa16.29■□□□□ 0.2
PF4V1-201ENST00000226524 PPP1R15AO75807 674 aaPredicted RBP16.29■□□□□ 0.2
PF4V1-201ENST00000226524 PIP4K2BP78356 416 aa16.29■□□□□ 0.2
PF4V1-201ENST00000226524 PPARGC1BQ86YN6 1023 aaKnown RBP16.29■□□□□ 0.2
PF4V1-201ENST00000226524 IQGAP3Q86VI3 1631 aa16.29■□□□□ 0.2
PF4V1-201ENST00000226524 RRBP1Q9P2E9 1410 aaKnown RBP16.28■□□□□ 0.2
PF4V1-201ENST00000226524 LRRC7Q96NW7 1537 aa16.28■□□□□ 0.2
PF4V1-201ENST00000226524 KCNA6P17658 529 aa16.26■□□□□ 0.19
PF4V1-201ENST00000226524 CHGAP10645 457 aaKnown RBP16.25■□□□□ 0.19
PF4V1-201ENST00000226524 PLEKHG1Q9ULL1 1385 aa16.24■□□□□ 0.19
PF4V1-201ENST00000226524 RIMS2Q9UQ26 1411 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms