RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 RSPH4AQ5TD94 716 aa25.05■■□□□ 1.6
LIM2-201ENST00000221973 PTPN23Q9H3S7 1636 aa25.04■■□□□ 1.6
LIM2-201ENST00000221973 CEP170BQ9Y4F5 1589 aaPredicted RBP25.03■■□□□ 1.6
LIM2-201ENST00000221973 KIF3BO15066 747 aa25.02■■□□□ 1.6
LIM2-201ENST00000221973 RRBP1Q9P2E9 1410 aaKnown RBP25.02■■□□□ 1.6
LIM2-201ENST00000221973 TCOF1Q13428 1488 aaKnown RBP25.02■■□□□ 1.6
LIM2-201ENST00000221973 NCKAP5LQ9HCH0 1330 aa25.01■■□□□ 1.59
LIM2-201ENST00000221973 PLA2R1Q13018 1463 aa24.99■■□□□ 1.59
LIM2-201ENST00000221973 KDM5DQ9BY66 1539 aa24.96■■□□□ 1.59
LIM2-201ENST00000221973 FAM135AQ9P2D6 1515 aa24.96■■□□□ 1.59
LIM2-201ENST00000221973 FBXO31Q5XUX0 539 aaPredicted RBP24.95■■□□□ 1.58
LIM2-201ENST00000221973 A2ML1A8K2U0 1454 aa24.95■■□□□ 1.58
LIM2-201ENST00000221973 MAST1Q9Y2H9 1570 aa24.94■■□□□ 1.58
LIM2-201ENST00000221973 TSPY4P0CV99 314 aa24.94■■□□□ 1.58
LIM2-201ENST00000221973 TSPY10P0CW01 314 aa24.94■■□□□ 1.58
LIM2-201ENST00000221973 PZPP20742 1482 aa24.94■■□□□ 1.58
LIM2-201ENST00000221973 DNMT1P26358 1616 aaKnown RBP24.94■■□□□ 1.58
LIM2-201ENST00000221973 PKD2Q13563 968 aa24.93■■□□□ 1.58
LIM2-201ENST00000221973 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP24.93■■□□□ 1.58
LIM2-201ENST00000221973 ITGAEP38570 1179 aa24.92■■□□□ 1.58
LIM2-201ENST00000221973 TNRQ92752 1358 aa24.9■■□□□ 1.58
LIM2-201ENST00000221973 IQSEC2Q5JU85 1478 aa24.89■■□□□ 1.58
LIM2-201ENST00000221973 ZNF335Q9H4Z2 1342 aaPredicted RBP24.89■■□□□ 1.58
LIM2-201ENST00000221973 WASHC2CQ9Y4E1 1318 aa24.89■■□□□ 1.58
LIM2-201ENST00000221973 RNF17Q9BXT8 1623 aaKnown RBP24.89■■□□□ 1.57
LIM2-201ENST00000221973 ABCC5O15440 1437 aa24.88■■□□□ 1.57
LIM2-201ENST00000221973 DAPK1P53355 1430 aa24.87■■□□□ 1.57
LIM2-201ENST00000221973 MROH1Q8NDA8 1641 aa24.85■■□□□ 1.57
LIM2-201ENST00000221973 ABCC3O15438 1527 aa24.83■■□□□ 1.57
LIM2-201ENST00000221973 CHIC2Q9UKJ5 165 aa24.83■■□□□ 1.57
LIM2-201ENST00000221973 NEURL4Q96JN8 1562 aa24.83■■□□□ 1.57
LIM2-201ENST00000221973 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.56
LIM2-201ENST00000221973 TRIM26Q12899 539 aaPredicted RBP24.81■■□□□ 1.56
LIM2-201ENST00000221973 NLRP1Q9C000 1473 aa24.79■■□□□ 1.56
LIM2-201ENST00000221973 ZC3H13Q5T200 1668 aaKnown RBP24.78■■□□□ 1.56
LIM2-201ENST00000221973 POLR1AO95602 1720 aaPredicted RBP24.78■■□□□ 1.56
LIM2-201ENST00000221973 DUOX2Q9NRD8 1548 aa24.77■■□□□ 1.56
LIM2-201ENST00000221973 SPATA31D1Q6ZQQ2 1576 aa24.77■■□□□ 1.56
LIM2-201ENST00000221973 SHANK2Q9UPX8 1470 aa24.77■■□□□ 1.56
LIM2-201ENST00000221973 CROCC2H7BZ55 1655 aa24.75■■□□□ 1.55
LIM2-201ENST00000221973 UGGT1Q9NYU2 1555 aa24.75■■□□□ 1.55
LIM2-201ENST00000221973 ERVK-7P63135 1459 aa24.73■■□□□ 1.55
LIM2-201ENST00000221973 CEP152O94986 1710 aa24.72■■□□□ 1.55
LIM2-201ENST00000221973 KIF15Q9NS87 1388 aa24.72■■□□□ 1.55
LIM2-201ENST00000221973 THEMISQ8N1K5 641 aaPredicted RBP24.72■■□□□ 1.55
LIM2-201ENST00000221973 RRP7BPQ9NSQ0 103 aa24.71■■□□□ 1.55
LIM2-201ENST00000221973 MED14O60244 1454 aa24.7■■□□□ 1.55
LIM2-201ENST00000221973 ANKRD30AQ9BXX3 1397 aa24.7■■□□□ 1.55
LIM2-201ENST00000221973 ANKLE2Q86XL3 938 aa24.7■■□□□ 1.54
LIM2-201ENST00000221973 DEPDC5O75140 1603 aa24.69■■□□□ 1.54
LIM2-201ENST00000221973 PRDM15P57071 1507 aaPredicted RBP24.69■■□□□ 1.54
LIM2-201ENST00000221973 ERBINQ96RT1 1412 aa24.69■■□□□ 1.54
LIM2-201ENST00000221973 VWDEQ8N2E2 1590 aa24.67■■□□□ 1.54
LIM2-201ENST00000221973 ADGRL2O95490 1459 aa24.67■■□□□ 1.54
LIM2-201ENST00000221973 UBAP1LF5GYI3 381 aa24.67■■□□□ 1.54
LIM2-201ENST00000221973 ROCK1Q13464 1354 aa24.67■■□□□ 1.54
LIM2-201ENST00000221973 CFAP65Q6ZU64 1925 aaKnown RBP24.65■■□□□ 1.54
LIM2-201ENST00000221973 NPHP4O75161 1426 aaPredicted RBP24.65■■□□□ 1.54
LIM2-201ENST00000221973 ARHGAP31Q2M1Z3 1444 aa24.64■■□□□ 1.54
LIM2-201ENST00000221973 CPS1P31327 1500 aa24.63■■□□□ 1.53
LIM2-201ENST00000221973 DISP3Q9P2K9 1392 aa24.63■■□□□ 1.53
LIM2-201ENST00000221973 UBR1Q8IWV7 1749 aa24.62■■□□□ 1.53
LIM2-201ENST00000221973 IQGAP1P46940 1657 aa24.61■■□□□ 1.53
LIM2-201ENST00000221973 ILDR2Q71H61 639 aa24.6■■□□□ 1.53
LIM2-201ENST00000221973 PCGF6Q9BYE7 350 aa24.59■■□□□ 1.53
LIM2-201ENST00000221973 HFM1A2PYH4 1435 aa24.56■■□□□ 1.52
LIM2-201ENST00000221973 NAIPQ13075 1403 aa24.56■■□□□ 1.52
LIM2-201ENST00000221973 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.56■■□□□ 1.52
LIM2-201ENST00000221973 STRCP1A6NGW2 1772 aa24.56■■□□□ 1.52
LIM2-201ENST00000221973 ARHGAP23Q9P227 1491 aa24.56■■□□□ 1.52
LIM2-201ENST00000221973 LMTK2Q8IWU2 1503 aa24.55■■□□□ 1.52
LIM2-201ENST00000221973 ALKQ9UM73 1620 aa24.54■■□□□ 1.52
LIM2-201ENST00000221973 SLIT1O75093 1534 aa24.54■■□□□ 1.52
LIM2-201ENST00000221973 ANKRD50Q9ULJ7 1429 aa24.53■■□□□ 1.52
LIM2-201ENST00000221973 LTKP29376 864 aa24.53■■□□□ 1.52
LIM2-201ENST00000221973 SCAF11Q99590 1463 aaKnown RBP24.51■■□□□ 1.51
LIM2-201ENST00000221973 PIK3C2BO00750 1634 aa24.5■■□□□ 1.51
LIM2-201ENST00000221973 KANK1Q14678 1352 aa24.49■■□□□ 1.51
LIM2-201ENST00000221973 SETD5Q9C0A6 1442 aa24.49■■□□□ 1.51
LIM2-201ENST00000221973 LRRC7Q96NW7 1537 aa24.48■■□□□ 1.51
LIM2-201ENST00000221973 SYNMO15061 1565 aa24.47■■□□□ 1.51
LIM2-201ENST00000221973 TOM1O60784 492 aa24.47■■□□□ 1.51
LIM2-201ENST00000221973 HSPA1LP34931 641 aa24.46■■□□□ 1.51
LIM2-201ENST00000221973 PIP4K2BP78356 416 aa24.46■■□□□ 1.51
LIM2-201ENST00000221973 TXNDC2Q86VQ3 553 aa24.46■■□□□ 1.51
LIM2-201ENST00000221973 GCC2Q8IWJ2 1684 aa24.46■■□□□ 1.51
LIM2-201ENST00000221973 NOS1P29475 1434 aa24.45■■□□□ 1.51
LIM2-201ENST00000221973 IDI1Q13907 227 aa24.45■■□□□ 1.5
LIM2-201ENST00000221973 EFCAB6Q5THR3 1501 aa24.45■■□□□ 1.5
LIM2-201ENST00000221973 TMEM2Q9UHN6 1383 aa24.44■■□□□ 1.5
LIM2-201ENST00000221973 KDM5AP29375 1690 aaKnown RBP24.43■■□□□ 1.5
LIM2-201ENST00000221973 RAB3GAP2Q9H2M9 1393 aa24.43■■□□□ 1.5
LIM2-201ENST00000221973 SCAF1Q9H7N4 1312 aaKnown RBP24.41■■□□□ 1.5
LIM2-201ENST00000221973 SOCS7O14512 581 aa24.38■■□□□ 1.49
LIM2-201ENST00000221973 TRIM52Q96A61 297 aa24.37■■□□□ 1.49
LIM2-201ENST00000221973 EID1Q9Y6B2 187 aa24.37■■□□□ 1.49
LIM2-201ENST00000221973 XIRP1Q702N8 1843 aaKnown RBP24.35■■□□□ 1.49
LIM2-201ENST00000221973 TET3O43151 1660 aa24.35■■□□□ 1.49
LIM2-201ENST00000221973 ADGRB3O60242 1522 aa24.35■■□□□ 1.49
LIM2-201ENST00000221973 RPRD2Q5VT52 1461 aaKnown RBP24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 109.4 ms