RNA–Protein interactions for RNA: ENST00000221166.9

NEFM-201, Transcript of neurofilament medium, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEFM, Length 4,020 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEFM-201ENST00000221166 SKAP1Q86WV1 359 aa14.77□□□□□ -0.05
NEFM-201ENST00000221166 PDE4AP27815 886 aa14.76□□□□□ -0.05
NEFM-201ENST00000221166 TMF1P82094 1093 aa14.76□□□□□ -0.05
NEFM-201ENST00000221166 GRIN2AQ12879 1464 aa14.76□□□□□ -0.05
NEFM-201ENST00000221166 TCERG1O14776 1098 aaKnown RBP14.75□□□□□ -0.05
NEFM-201ENST00000221166 KNSTRNQ9Y448 316 aa14.75□□□□□ -0.05
NEFM-201ENST00000221166 CCDC144AA2RUR9 1427 aa14.75□□□□□ -0.05
NEFM-201ENST00000221166 RAPGEF6Q8TEU7 1601 aa14.74□□□□□ -0.05
NEFM-201ENST00000221166 PBRM1Q86U86 1689 aa14.74□□□□□ -0.05
NEFM-201ENST00000221166 NEFMP07197 916 aa14.74□□□□□ -0.05
NEFM-201ENST00000221166 CRBNQ96SW2 442 aa14.74□□□□□ -0.05
NEFM-201ENST00000221166 KIAA0556O60303 1618 aa14.74□□□□□ -0.05
NEFM-201ENST00000221166 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
NEFM-201ENST00000221166 RNF123Q5XPI4 1314 aa14.7□□□□□ -0.06
NEFM-201ENST00000221166 RGS3P49796 1198 aa14.7□□□□□ -0.06
NEFM-201ENST00000221166 PTPRGP23470 1445 aa14.68□□□□□ -0.06
NEFM-201ENST00000221166 ADAMTS8Q9UP79 889 aa14.68□□□□□ -0.06
NEFM-201ENST00000221166 RTN4Q9NQC3 1192 aaKnown RBP14.68□□□□□ -0.06
NEFM-201ENST00000221166 CCDC146Q8IYE0 955 aa14.68□□□□□ -0.06
NEFM-201ENST00000221166 KIF14Q15058 1648 aa14.67□□□□□ -0.06
NEFM-201ENST00000221166 SLC4A3P48751 1232 aa14.67□□□□□ -0.06
NEFM-201ENST00000221166 RALGAPBQ86X10 1494 aa14.67□□□□□ -0.06
NEFM-201ENST00000221166 BCORL1Q5H9F3 1711 aa14.67□□□□□ -0.06
NEFM-201ENST00000221166 CANXP27824 592 aaKnown RBP14.66□□□□□ -0.06
NEFM-201ENST00000221166 MAGI1Q96QZ7 1491 aaPredicted RBP14.66□□□□□ -0.06
NEFM-201ENST00000221166 CHGAP10645 457 aaKnown RBP14.65□□□□□ -0.06
NEFM-201ENST00000221166 RSPH4AQ5TD94 716 aa14.64□□□□□ -0.07
NEFM-201ENST00000221166 C20orf194Q5TEA3 1177 aa14.64□□□□□ -0.07
NEFM-201ENST00000221166 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.64□□□□□ -0.07
NEFM-201ENST00000221166 BACH2Q9BYV9 841 aa14.64□□□□□ -0.07
NEFM-201ENST00000221166 LRPPRCP42704 1394 aaKnown RBP14.63□□□□□ -0.07
NEFM-201ENST00000221166 ATP10BO94823 1461 aa14.63□□□□□ -0.07
NEFM-201ENST00000221166 MBD5Q9P267 1494 aa14.63□□□□□ -0.07
NEFM-201ENST00000221166 NEUROD2Q15784 382 aa14.63□□□□□ -0.07
NEFM-201ENST00000221166 DISP3Q9P2K9 1392 aa14.62□□□□□ -0.07
NEFM-201ENST00000221166 PER1O15534 1290 aaPredicted RBP14.62□□□□□ -0.07
NEFM-201ENST00000221166 UHRF1BP1Q6BDS2 1440 aa14.62□□□□□ -0.07
NEFM-201ENST00000221166 ADGRL2O95490 1459 aa14.62□□□□□ -0.07
NEFM-201ENST00000221166 TNNT2P45379 298 aaPredicted RBP14.62□□□□□ -0.07
NEFM-201ENST00000221166 SYNJ2O15056 1496 aa14.61□□□□□ -0.07
NEFM-201ENST00000221166 DDRGK1Q96HY6 314 aa14.61□□□□□ -0.07
NEFM-201ENST00000221166 KDM5CP41229 1560 aa14.61□□□□□ -0.07
NEFM-201ENST00000221166 PPM1GO15355 546 aaPredicted RBP14.6□□□□□ -0.07
NEFM-201ENST00000221166 MS4A1P11836 297 aa14.6□□□□□ -0.07
NEFM-201ENST00000221166 GOLGA2Q08379 1002 aa14.6□□□□□ -0.07
NEFM-201ENST00000221166 SENP3Q9H4L4 574 aaPredicted RBP14.6□□□□□ -0.07
NEFM-201ENST00000221166 CDCA8Q53HL2 280 aa14.59□□□□□ -0.07
NEFM-201ENST00000221166 ITSN2Q9NZM3 1697 aa14.59□□□□□ -0.07
NEFM-201ENST00000221166 TESK2Q96S53 571 aa14.58□□□□□ -0.07
NEFM-201ENST00000221166 PARD3Q8TEW0 1356 aa14.58□□□□□ -0.07
NEFM-201ENST00000221166 PPP2R1AP30153 589 aa14.58□□□□□ -0.08
NEFM-201ENST00000221166 ERBINQ96RT1 1412 aa14.58□□□□□ -0.08
NEFM-201ENST00000221166 APAF1O14727 1248 aa14.57□□□□□ -0.08
NEFM-201ENST00000221166 PRAG1Q86YV5 1406 aa14.57□□□□□ -0.08
NEFM-201ENST00000221166 EFCAB2Q5VUJ9 269 aa14.56□□□□□ -0.08
NEFM-201ENST00000221166 EIF4G3O43432 1585 aaKnown RBP14.56□□□□□ -0.08
NEFM-201ENST00000221166 CCDC141Q6ZP82 1450 aa14.56□□□□□ -0.08
NEFM-201ENST00000221166 FRAT1Q92837 279 aaPredicted RBP14.56□□□□□ -0.08
NEFM-201ENST00000221166 ARHGAP5Q13017 1502 aa14.55□□□□□ -0.08
NEFM-201ENST00000221166 WASHC2CQ9Y4E1 1318 aa14.54□□□□□ -0.08
NEFM-201ENST00000221166 CEP170Q5SW79 1584 aa14.54□□□□□ -0.08
NEFM-201ENST00000221166 PLEKHH2Q8IVE3 1493 aa14.54□□□□□ -0.08
NEFM-201ENST00000221166 ARHGEF12Q9NZN5 1544 aa14.53□□□□□ -0.08
NEFM-201ENST00000221166 AFAP1Q8N556 730 aa14.53□□□□□ -0.08
NEFM-201ENST00000221166 FAM135AQ9P2D6 1515 aa14.53□□□□□ -0.08
NEFM-201ENST00000221166 ADGBQ8N7X0 1667 aa14.53□□□□□ -0.08
NEFM-201ENST00000221166 CENPQQ7L2Z9 268 aaPredicted RBP14.52□□□□□ -0.08
NEFM-201ENST00000221166 SPAG9O60271 1321 aaKnown RBP14.52□□□□□ -0.09
NEFM-201ENST00000221166 IL27Q8NEV9 243 aa14.52□□□□□ -0.09
NEFM-201ENST00000221166 KIF3BO15066 747 aa14.51□□□□□ -0.09
NEFM-201ENST00000221166 BCAR3O75815 825 aa14.5□□□□□ -0.09
NEFM-201ENST00000221166 ABCC10Q5T3U5 1492 aa14.5□□□□□ -0.09
NEFM-201ENST00000221166 RRP7AQ9Y3A4 280 aaKnown RBP14.5□□□□□ -0.09
NEFM-201ENST00000221166 FAM161AQ3B820 660 aa14.5□□□□□ -0.09
NEFM-201ENST00000221166 DUSP27Q5VZP5 1158 aa14.5□□□□□ -0.09
NEFM-201ENST00000221166 SHANK2Q9UPX8 1470 aa14.49□□□□□ -0.09
NEFM-201ENST00000221166 A2MP01023 1474 aa14.49□□□□□ -0.09
NEFM-201ENST00000221166 CFAP70Q5T0N1 1121 aa14.48□□□□□ -0.09
NEFM-201ENST00000221166 PLEKHH1Q9ULM0 1364 aa14.47□□□□□ -0.09
NEFM-201ENST00000221166 USP35Q9P2H5 1018 aa14.46□□□□□ -0.09
NEFM-201ENST00000221166 COG6Q9Y2V7 657 aa14.46□□□□□ -0.09
NEFM-201ENST00000221166 NUP160Q12769 1436 aa14.46□□□□□ -0.09
NEFM-201ENST00000221166 NFKBIBQ15653 356 aa14.46□□□□□ -0.09
NEFM-201ENST00000221166 SYCP2Q9BX26 1530 aa14.46□□□□□ -0.09
NEFM-201ENST00000221166 POLR1AO95602 1720 aaPredicted RBP14.46□□□□□ -0.09
NEFM-201ENST00000221166 MORC1Q86VD1 984 aa14.45□□□□□ -0.1
NEFM-201ENST00000221166 AMER1Q5JTC6 1135 aaPredicted RBP14.45□□□□□ -0.1
NEFM-201ENST00000221166 ARXQ96QS3 562 aa14.45□□□□□ -0.1
NEFM-201ENST00000221166 BCL2L13Q9BXK5 485 aa14.45□□□□□ -0.1
NEFM-201ENST00000221166 SLFN5Q08AF3 891 aa14.44□□□□□ -0.1
NEFM-201ENST00000221166 COL17A1Q9UMD9 1497 aaPredicted RBP14.44□□□□□ -0.1
NEFM-201ENST00000221166 PANK1Q8TE04 598 aa14.44□□□□□ -0.1
NEFM-201ENST00000221166 CLUAP1Q96AJ1 413 aa14.44□□□□□ -0.1
NEFM-201ENST00000221166 TRAK1Q9UPV9 953 aa14.44□□□□□ -0.1
NEFM-201ENST00000221166 PLA2R1Q13018 1463 aa14.44□□□□□ -0.1
NEFM-201ENST00000221166 SPINK5Q9NQ38 1064 aaPredicted RBP14.44□□□□□ -0.1
NEFM-201ENST00000221166 CDC42BPAQ5VT25 1732 aa14.42□□□□□ -0.1
NEFM-201ENST00000221166 CENPJQ9HC77 1338 aaPredicted RBP14.42□□□□□ -0.1
NEFM-201ENST00000221166 E9PSI1 815 aa14.42□□□□□ -0.1
NEFM-201ENST00000221166 NUTM2DQ5VT03 806 aaPredicted RBP14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms