RNA–Protein interactions for RNA: ENST00000220562.8

EXTL3-201, Transcript of exostosin like glycosyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXTL3, Length 6,483 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3-201ENST00000220562 TMX4Q9H1E5 349 aaPredicted RBP22.27■■□□□ 1.16
EXTL3-201ENST00000220562 AMPHP49418 695 aa22.26■■□□□ 1.15
EXTL3-201ENST00000220562 LMOD3Q0VAK6 560 aa22.26■■□□□ 1.15
EXTL3-201ENST00000220562 CSPP1Q1MSJ5 1256 aa22.26■■□□□ 1.15
EXTL3-201ENST00000220562 LTV1Q96GA3 475 aaPredicted RBP22.26■■□□□ 1.15
EXTL3-201ENST00000220562 KIF15Q9NS87 1388 aa22.25■■□□□ 1.15
EXTL3-201ENST00000220562 RRP7AQ9Y3A4 280 aaKnown RBP22.25■■□□□ 1.15
EXTL3-201ENST00000220562 PDE3BQ13370 1112 aa22.24■■□□□ 1.15
EXTL3-201ENST00000220562 WASHC2CQ9Y4E1 1318 aa22.24■■□□□ 1.15
EXTL3-201ENST00000220562 HDAC5Q9UQL6 1122 aa22.24■■□□□ 1.15
EXTL3-201ENST00000220562 FOXD4L5Q5VV16 416 aaPredicted RBP22.23■■□□□ 1.15
EXTL3-201ENST00000220562 FOXD4L4Q8WXT5 416 aaPredicted RBP22.23■■□□□ 1.15
EXTL3-201ENST00000220562 EID1Q9Y6B2 187 aa22.23■■□□□ 1.15
EXTL3-201ENST00000220562 CCDC18Q5T9S5 1454 aa22.23■■□□□ 1.15
EXTL3-201ENST00000220562 TRAK1Q9UPV9 953 aa22.22■■□□□ 1.15
EXTL3-201ENST00000220562 PHLDB1Q86UU1 1377 aa22.21■■□□□ 1.15
EXTL3-201ENST00000220562 NUTM2FA1L443 756 aa22.21■■□□□ 1.15
EXTL3-201ENST00000220562 MYBBP1AQ9BQG0 1328 aaKnown RBP22.21■■□□□ 1.15
EXTL3-201ENST00000220562 RASSF8Q8NHQ8 419 aa22.21■■□□□ 1.15
EXTL3-201ENST00000220562 CREBRFQ8IUR6 639 aa22.21■■□□□ 1.15
EXTL3-201ENST00000220562 ST18O60284 1047 aa22.2■■□□□ 1.14
EXTL3-201ENST00000220562 RAPGEF2Q9Y4G8 1499 aa22.2■■□□□ 1.14
EXTL3-201ENST00000220562 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.19■■□□□ 1.14
EXTL3-201ENST00000220562 CCDC34Q96HJ3 373 aa22.18■■□□□ 1.14
EXTL3-201ENST00000220562 PANK3Q9H999 370 aa22.18■■□□□ 1.14
EXTL3-201ENST00000220562 KIF16BQ96L93 1317 aa22.18■■□□□ 1.14
EXTL3-201ENST00000220562 TOMM22Q9NS69 142 aa22.17■■□□□ 1.14
EXTL3-201ENST00000220562 WIZO95785 1651 aa22.17■■□□□ 1.14
EXTL3-201ENST00000220562 G3V3G9 751 aa22.16■■□□□ 1.14
EXTL3-201ENST00000220562 DCAF8Q5TAQ9 597 aa22.16■■□□□ 1.14
EXTL3-201ENST00000220562 PHF14O94880 888 aa22.14■■□□□ 1.14
EXTL3-201ENST00000220562 RILPL2Q969X0 211 aa22.14■■□□□ 1.13
EXTL3-201ENST00000220562 TOP2AP11388 1531 aaKnown RBP22.14■■□□□ 1.13
EXTL3-201ENST00000220562 PLIN1O60240 522 aa22.13■■□□□ 1.13
EXTL3-201ENST00000220562 PDE4CQ08493 712 aa22.13■■□□□ 1.13
EXTL3-201ENST00000220562 ST20-MTHFSA0A0A6YYL1 179 aa22.13■■□□□ 1.13
EXTL3-201ENST00000220562 BCL2L13Q9BXK5 485 aa22.13■■□□□ 1.13
EXTL3-201ENST00000220562 RSPH4AQ5TD94 716 aa22.13■■□□□ 1.13
EXTL3-201ENST00000220562 CCDC144AA2RUR9 1427 aa22.12■■□□□ 1.13
EXTL3-201ENST00000220562 ANKRD45Q5TZF3 282 aa22.12■■□□□ 1.13
EXTL3-201ENST00000220562 CENPQQ7L2Z9 268 aaPredicted RBP22.11■■□□□ 1.13
EXTL3-201ENST00000220562 ELL2O00472 640 aaPredicted RBP22.11■■□□□ 1.13
EXTL3-201ENST00000220562 FRAT2O75474 233 aaPredicted RBP22.11■■□□□ 1.13
EXTL3-201ENST00000220562 DDX11L8A8MPP1 907 aa22.1■■□□□ 1.13
EXTL3-201ENST00000220562 SF3A1Q15459 793 aaKnown RBP22.1■■□□□ 1.13
EXTL3-201ENST00000220562 A0A0U1RQG5 324 aaPredicted RBP22.09■■□□□ 1.13
EXTL3-201ENST00000220562 H3BQV1 296 aa22.09■■□□□ 1.13
EXTL3-201ENST00000220562 IFFO2Q5TF58 517 aa22.09■■□□□ 1.13
EXTL3-201ENST00000220562 GOLGA6L1Q8N7Z2 621 aa22.08■■□□□ 1.13
EXTL3-201ENST00000220562 CRBNQ96SW2 442 aa22.07■■□□□ 1.12
EXTL3-201ENST00000220562 SLC4A3P48751 1232 aa22.07■■□□□ 1.12
EXTL3-201ENST00000220562 FAM161AQ3B820 660 aa22.07■■□□□ 1.12
EXTL3-201ENST00000220562 VPS53Q5VIR6 699 aa22.06■■□□□ 1.12
EXTL3-201ENST00000220562 EXOC6Q8TAG9 804 aa22.06■■□□□ 1.12
EXTL3-201ENST00000220562 KIF3AQ9Y496 699 aa22.06■■□□□ 1.12
EXTL3-201ENST00000220562 RRP1P56182 461 aaKnown RBP22.06■■□□□ 1.12
EXTL3-201ENST00000220562 COG3Q96JB2 828 aa22.06■■□□□ 1.12
EXTL3-201ENST00000220562 GTF2E1P29083 439 aaPredicted RBP22.05■■□□□ 1.12
EXTL3-201ENST00000220562 E9PSI1 815 aa22.05■■□□□ 1.12
EXTL3-201ENST00000220562 UACAQ9BZF9 1416 aa22.05■■□□□ 1.12
EXTL3-201ENST00000220562 MARCH6O60337 910 aa22.05■■□□□ 1.12
EXTL3-201ENST00000220562 ZKSCAN2Q63HK3 967 aa22.05■■□□□ 1.12
EXTL3-201ENST00000220562 PDE4AP27815 886 aa22.05■■□□□ 1.12
EXTL3-201ENST00000220562 CGNL1Q0VF96 1302 aa22.05■■□□□ 1.12
EXTL3-201ENST00000220562 C1orf141Q5JVX7 400 aa22.04■■□□□ 1.12
EXTL3-201ENST00000220562 DHX57Q6P158 1386 aaKnown RBP22.04■■□□□ 1.12
EXTL3-201ENST00000220562 FOXD4L6Q3SYB3 417 aaPredicted RBP22.03■■□□□ 1.12
EXTL3-201ENST00000220562 FOXD4L3Q6VB84 417 aaPredicted RBP22.03■■□□□ 1.12
EXTL3-201ENST00000220562 FAM184AQ8NB25 1140 aa22.03■■□□□ 1.12
EXTL3-201ENST00000220562 TPM3P06753 285 aa22.02■■□□□ 1.12
EXTL3-201ENST00000220562 EVC2Q86UK5 1308 aa22.02■■□□□ 1.11
EXTL3-201ENST00000220562 PES1O00541 588 aaKnown RBP22.01■■□□□ 1.11
EXTL3-201ENST00000220562 TPD52L1Q16890 204 aaPredicted RBP22■■□□□ 1.11
EXTL3-201ENST00000220562 COG6Q9Y2V7 657 aa22■■□□□ 1.11
EXTL3-201ENST00000220562 USP47Q96K76 1375 aa22■■□□□ 1.11
EXTL3-201ENST00000220562 TNNT3P45378 269 aaPredicted RBP22■■□□□ 1.11
EXTL3-201ENST00000220562 PRM3Q9NNZ6 103 aa22■■□□□ 1.11
EXTL3-201ENST00000220562 DDX49Q9Y6V7 483 aaKnown RBP21.99■■□□□ 1.11
EXTL3-201ENST00000220562 JPH4Q96JJ6 628 aa21.98■■□□□ 1.11
EXTL3-201ENST00000220562 PRKRIP1Q9H875 184 aaPredicted RBP21.98■■□□□ 1.11
EXTL3-201ENST00000220562 NGEFQ8N5V2 710 aa21.97■■□□□ 1.11
EXTL3-201ENST00000220562 MINK1Q8N4C8 1332 aaPredicted RBP21.97■■□□□ 1.11
EXTL3-201ENST00000220562 ZBED9Q6R2W3 1325 aa21.96■■□□□ 1.11
EXTL3-201ENST00000220562 EIF2S2P20042 333 aaKnown RBP21.96■■□□□ 1.11
EXTL3-201ENST00000220562 DIAPH3Q9NSV4 1193 aa21.96■■□□□ 1.11
EXTL3-201ENST00000220562 CEP89Q96ST8 783 aa21.95■■□□□ 1.1
EXTL3-201ENST00000220562 GOLGA6L19H0YKK7 550 aa21.95■■□□□ 1.1
EXTL3-201ENST00000220562 AKAP17AQ02040 695 aaKnown RBP21.94■■□□□ 1.1
EXTL3-201ENST00000220562 MCTP1Q6DN14 999 aa21.94■■□□□ 1.1
EXTL3-201ENST00000220562 VGFO15240 615 aaPredicted RBP21.94■■□□□ 1.1
EXTL3-201ENST00000220562 SKOR2Q2VWA4 1001 aaPredicted RBP21.94■■□□□ 1.1
EXTL3-201ENST00000220562 CADPSQ9ULU8 1353 aa21.94■■□□□ 1.1
EXTL3-201ENST00000220562 ATP6V1DQ9Y5K8 247 aa21.94■■□□□ 1.1
EXTL3-201ENST00000220562 APAF1O14727 1248 aa21.93■■□□□ 1.1
EXTL3-201ENST00000220562 NECTIN2Q92692 538 aa21.93■■□□□ 1.1
EXTL3-201ENST00000220562 EVA1CP58658 441 aa21.93■■□□□ 1.1
EXTL3-201ENST00000220562 TEFQ10587 303 aa21.93■■□□□ 1.1
EXTL3-201ENST00000220562 ANO8Q9HCE9 1232 aaPredicted RBP21.93■■□□□ 1.1
EXTL3-201ENST00000220562 USP35Q9P2H5 1018 aa21.92■■□□□ 1.1
EXTL3-201ENST00000220562 ANO2Q9NQ90 1003 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 85.5 ms