RNA–Protein interactions for RNA: ENST00000216297.6

SUPT16H-201, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUPT16H, Length 4,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-201ENST00000216297 SEC24BO95487 1268 aa11.05□□□□□ -0.64
SUPT16H-201ENST00000216297 UQCRHP07919 91 aa11.05□□□□□ -0.64
SUPT16H-201ENST00000216297 FGD1P98174 961 aa11.05□□□□□ -0.64
SUPT16H-201ENST00000216297 NEUROD2Q15784 382 aa11.04□□□□□ -0.64
SUPT16H-201ENST00000216297 DDX49Q9Y6V7 483 aaKnown RBP11.03□□□□□ -0.64
SUPT16H-201ENST00000216297 NAIPQ13075 1403 aa11.03□□□□□ -0.64
SUPT16H-201ENST00000216297 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
SUPT16H-201ENST00000216297 AQRO60306 1485 aaKnown RBP eCLIP11.03□□□□□ -0.641e-6■■■□□ 14.8
SUPT16H-201ENST00000216297 CCDC146Q8IYE0 955 aa11.03□□□□□ -0.64
SUPT16H-201ENST00000216297 RGL3Q3MIN7 710 aa11.02□□□□□ -0.65
SUPT16H-201ENST00000216297 CCDC173Q0VFZ6 552 aa11.02□□□□□ -0.65
SUPT16H-201ENST00000216297 SKOR2Q2VWA4 1001 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-201ENST00000216297 CLUAP1Q96AJ1 413 aa11.01□□□□□ -0.65
SUPT16H-201ENST00000216297 C22orf23Q9BZE7 217 aa11.01□□□□□ -0.65
SUPT16H-201ENST00000216297 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
SUPT16H-201ENST00000216297 XPCQ01831 940 aaPredicted RBP11□□□□□ -0.65
SUPT16H-201ENST00000216297 ISY1Q9ULR0 285 aaKnown RBP11□□□□□ -0.65
SUPT16H-201ENST00000216297 ADAMTS8Q9UP79 889 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 BCAR3O75815 825 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 KNSTRNQ9Y448 316 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 ERBB4Q15303 1308 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 KDM2BQ8NHM5 1336 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 DHX29Q7Z478 1369 aaKnown RBP11□□□□□ -0.65
SUPT16H-201ENST00000216297 PKD2Q13563 968 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 PANK1Q8TE04 598 aa11□□□□□ -0.65
SUPT16H-201ENST00000216297 FSD2A1L4K1 749 aa10.99□□□□□ -0.65
SUPT16H-201ENST00000216297 PMFBP1Q8TBY8 1022 aa10.99□□□□□ -0.65
SUPT16H-201ENST00000216297 PTPRKQ15262 1439 aa10.98□□□□□ -0.65
SUPT16H-201ENST00000216297 IGHDP01880 384 aa10.98□□□□□ -0.65
SUPT16H-201ENST00000216297 TPRNQ4KMQ1 711 aa10.98□□□□□ -0.65
SUPT16H-201ENST00000216297 RWDD1Q9H446 243 aaPredicted RBP10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 CGNL1Q0VF96 1302 aa10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 PTMSP20962 102 aa10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 BCL11BQ9C0K0 894 aaPredicted RBP10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 MAPK8IP2Q13387 824 aaPredicted RBP10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 OFD1O75665 1012 aa10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 FTSJ3Q8IY81 847 aaKnown RBP10.97□□□□□ -0.65
SUPT16H-201ENST00000216297 CBX1P83916 185 aa10.96□□□□□ -0.65
SUPT16H-201ENST00000216297 PANK3Q9H999 370 aa10.96□□□□□ -0.65
SUPT16H-201ENST00000216297 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.96□□□□□ -0.65
SUPT16H-201ENST00000216297 CSPP1Q1MSJ5 1256 aa10.96□□□□□ -0.65
SUPT16H-201ENST00000216297 PLCB2Q00722 1185 aa10.96□□□□□ -0.66
SUPT16H-201ENST00000216297 BCL2L13Q9BXK5 485 aa10.96□□□□□ -0.66
SUPT16H-201ENST00000216297 CENPJQ9HC77 1338 aaPredicted RBP10.95□□□□□ -0.66
SUPT16H-201ENST00000216297 SMAP1Q8IYB5 467 aaPredicted RBP10.95□□□□□ -0.66
SUPT16H-201ENST00000216297 TBC1D32Q96NH3 1257 aa10.95□□□□□ -0.66
SUPT16H-201ENST00000216297 IGF1RP08069 1367 aa10.95□□□□□ -0.66
SUPT16H-201ENST00000216297 ZNF771Q7L3S4 317 aaPredicted RBP10.94□□□□□ -0.66
SUPT16H-201ENST00000216297 PDZRN3Q9UPQ7 1066 aa10.94□□□□□ -0.66
SUPT16H-201ENST00000216297 APAF1O14727 1248 aa10.94□□□□□ -0.66
SUPT16H-201ENST00000216297 PTPN23Q9H3S7 1636 aa10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 MYOM3Q5VTT5 1437 aa10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 KIAA2012Q0VF49 1180 aa10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 TNPO1Q92973 898 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 LRPPRCP42704 1394 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 CAVIN1Q6NZI2 390 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 CHMP4BQ9H444 224 aaKnown RBP10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 ANTXR1Q9H6X2 564 aa10.93□□□□□ -0.66
SUPT16H-201ENST00000216297 MPNDQ8N594 471 aa10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 PDIA4P13667 645 aaKnown RBP10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 DUSP27Q5VZP5 1158 aa10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 PRDM4Q9UKN5 801 aa10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 MIA2Q96PC5 1412 aa10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 GAS2L3Q86XJ1 694 aa10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 TOP2BQ02880 1626 aa10.92□□□□□ -0.66
SUPT16H-201ENST00000216297 MCTP1Q6DN14 999 aa10.91□□□□□ -0.66
SUPT16H-201ENST00000216297 RNF214Q8ND24 703 aa10.91□□□□□ -0.66
SUPT16H-201ENST00000216297 NAP1L2Q9ULW6 460 aaPredicted RBP10.9□□□□□ -0.66
SUPT16H-201ENST00000216297 DYNC1I1O14576 645 aa10.9□□□□□ -0.66
SUPT16H-201ENST00000216297 RIPK4P57078 832 aa10.9□□□□□ -0.66
SUPT16H-201ENST00000216297 TMF1P82094 1093 aa10.9□□□□□ -0.66
SUPT16H-201ENST00000216297 CHAF1AQ13111 956 aaPredicted RBP10.9□□□□□ -0.66
SUPT16H-201ENST00000216297 PLCD3Q8N3E9 789 aa10.9□□□□□ -0.66
SUPT16H-201ENST00000216297 USP19O94966 1318 aa10.89□□□□□ -0.67
SUPT16H-201ENST00000216297 FOXD4L5Q5VV16 416 aaPredicted RBP10.89□□□□□ -0.67
SUPT16H-201ENST00000216297 FOXD4L4Q8WXT5 416 aaPredicted RBP10.89□□□□□ -0.67
SUPT16H-201ENST00000216297 ANKRD30BQ9BXX2 1392 aa10.89□□□□□ -0.67
SUPT16H-201ENST00000216297 E9PSI1 815 aa10.89□□□□□ -0.67
SUPT16H-201ENST00000216297 IGSF3O75054 1194 aa10.89□□□□□ -0.67
SUPT16H-201ENST00000216297 VGLL3A8MV65 326 aa10.88□□□□□ -0.67
SUPT16H-201ENST00000216297 SASS6Q6UVJ0 657 aa10.88□□□□□ -0.67
SUPT16H-201ENST00000216297 CGNQ9P2M7 1197 aaKnown RBP10.88□□□□□ -0.67
SUPT16H-201ENST00000216297 CFTRP13569 1480 aa10.88□□□□□ -0.67
SUPT16H-201ENST00000216297 PCF11O94913 1555 aaKnown RBP10.88□□□□□ -0.67
SUPT16H-201ENST00000216297 CASKIN1Q8WXD9 1431 aa10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 SPDYE4A6NLX3 237 aa10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 PPP4R3BQ5MIZ7 849 aa10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 CCDC94Q9BW85 323 aaPredicted RBP10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 CCDC39Q9UFE4 941 aa10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 RRP7AQ9Y3A4 280 aaKnown RBP10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 EIF3AQ14152 1382 aaKnown RBP10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 SLFN5Q08AF3 891 aa10.87□□□□□ -0.67
SUPT16H-201ENST00000216297 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.87□□□□□ -0.673e-8■■■■□ 20.2
SUPT16H-201ENST00000216297 PDE3AQ14432 1141 aa10.86□□□□□ -0.67
SUPT16H-201ENST00000216297 ITPRIPQ8IWB1 547 aa10.85□□□□□ -0.67
SUPT16H-201ENST00000216297 RPRD2Q5VT52 1461 aaKnown RBP10.85□□□□□ -0.67
SUPT16H-201ENST00000216297 FYCO1Q9BQS8 1478 aa10.85□□□□□ -0.67
SUPT16H-201ENST00000216297 SSFA2P28290 1259 aa10.85□□□□□ -0.67
SUPT16H-201ENST00000216297 SPATA31E1Q6ZUB1 1445 aa10.84□□□□□ -0.67
SUPT16H-201ENST00000216297 CFDP1Q9UEE9 299 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms