RNA–Protein interactions for RNA: ENST00000200652.3

SLC22A4-201, Transcript of solute carrier family 22 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC22A4, Length 2,201 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A4-201ENST00000200652 PLA2R1Q13018 1463 aa25.08■■□□□ 1.61
SLC22A4-201ENST00000200652 CCDC144AA2RUR9 1427 aa25.08■■□□□ 1.61
SLC22A4-201ENST00000200652 PRKRIP1Q9H875 184 aaPredicted RBP25.08■■□□□ 1.6
SLC22A4-201ENST00000200652 CARD11Q9BXL7 1154 aa25.05■■□□□ 1.6
SLC22A4-201ENST00000200652 RTEL1-TNFRSF6BF6WH68 1400 aa25.02■■□□□ 1.6
SLC22A4-201ENST00000200652 ARID4BQ4LE39 1312 aaPredicted RBP25.02■■□□□ 1.6
SLC22A4-201ENST00000200652 SPAG9O60271 1321 aaKnown RBP25.01■■□□□ 1.59
SLC22A4-201ENST00000200652 ABCA9Q8IUA7 1624 aa25.01■■□□□ 1.59
SLC22A4-201ENST00000200652 CCDC184Q52MB2 194 aa25■■□□□ 1.59
SLC22A4-201ENST00000200652 AFAP1Q8N556 730 aa25■■□□□ 1.59
SLC22A4-201ENST00000200652 ATP10AO60312 1499 aa24.99■■□□□ 1.59
SLC22A4-201ENST00000200652 ZFYVE16Q7Z3T8 1539 aa24.99■■□□□ 1.59
SLC22A4-201ENST00000200652 PRAG1Q86YV5 1406 aa24.97■■□□□ 1.59
SLC22A4-201ENST00000200652 TRPM1Q7Z4N2 1603 aa24.97■■□□□ 1.59
SLC22A4-201ENST00000200652 FANCAO15360 1455 aa24.97■■□□□ 1.59
SLC22A4-201ENST00000200652 HNRNPUQ00839 825 aaKnown RBP eCLIP24.96■■□□□ 1.59
SLC22A4-201ENST00000200652 RGL3Q3MIN7 710 aa24.96■■□□□ 1.59
SLC22A4-201ENST00000200652 A2MP01023 1474 aa24.95■■□□□ 1.59
SLC22A4-201ENST00000200652 DHX29Q7Z478 1369 aaKnown RBP24.95■■□□□ 1.59
SLC22A4-201ENST00000200652 ROCK2O75116 1388 aaKnown RBP24.95■■□□□ 1.58
SLC22A4-201ENST00000200652 ASXL2Q76L83 1435 aa24.94■■□□□ 1.58
SLC22A4-201ENST00000200652 POLR3GLQ9BT43 218 aa24.94■■□□□ 1.58
SLC22A4-201ENST00000200652 ST20-MTHFSA0A0A6YYL1 179 aa24.93■■□□□ 1.58
SLC22A4-201ENST00000200652 OSCARQ8IYS5 282 aa24.92■■□□□ 1.58
SLC22A4-201ENST00000200652 INO80Q9ULG1 1556 aaPredicted RBP24.91■■□□□ 1.58
SLC22A4-201ENST00000200652 MRS2Q9HD23 443 aa24.9■■□□□ 1.58
SLC22A4-201ENST00000200652 ATP7AQ04656 1500 aa24.9■■□□□ 1.58
SLC22A4-201ENST00000200652 E9PCH4 1651 aa24.89■■□□□ 1.57
SLC22A4-201ENST00000200652 DEPDC5O75140 1603 aa24.89■■□□□ 1.57
SLC22A4-201ENST00000200652 ADGRL1O94910 1474 aa24.88■■□□□ 1.57
SLC22A4-201ENST00000200652 SCAPERQ9BY12 1400 aa24.87■■□□□ 1.57
SLC22A4-201ENST00000200652 FKBP8Q14318 412 aa24.87■■□□□ 1.57
SLC22A4-201ENST00000200652 GPRASP1Q5JY77 1395 aa24.86■■□□□ 1.57
SLC22A4-201ENST00000200652 NBPF1Q3BBV0 1214 aa24.85■■□□□ 1.57
SLC22A4-201ENST00000200652 LAMC1P11047 1609 aa24.84■■□□□ 1.57
SLC22A4-201ENST00000200652 FAM9BQ8IZU0 186 aa24.84■■□□□ 1.57
SLC22A4-201ENST00000200652 EIF2AK4Q9P2K8 1649 aaKnown RBP24.83■■□□□ 1.57
SLC22A4-201ENST00000200652 TRPM2O94759 1503 aa24.8■■□□□ 1.56
SLC22A4-201ENST00000200652 TET3O43151 1660 aa24.8■■□□□ 1.56
SLC22A4-201ENST00000200652 NPM1P06748 294 aaKnown RBP eCLIP24.8■■□□□ 1.56
SLC22A4-201ENST00000200652 NEFLP07196 543 aa24.8■■□□□ 1.56
SLC22A4-201ENST00000200652 SPHKAPQ2M3C7 1700 aa24.8■■□□□ 1.56
SLC22A4-201ENST00000200652 PRDM15P57071 1507 aaPredicted RBP24.8■■□□□ 1.56
SLC22A4-201ENST00000200652 VWDEQ8N2E2 1590 aa24.79■■□□□ 1.56
SLC22A4-201ENST00000200652 PTPRTO14522 1441 aa24.78■■□□□ 1.56
SLC22A4-201ENST00000200652 MYT1LQ9UL68 1186 aa24.78■■□□□ 1.56
SLC22A4-201ENST00000200652 KANK1Q14678 1352 aa24.76■■□□□ 1.55
SLC22A4-201ENST00000200652 CEP152O94986 1710 aa24.76■■□□□ 1.55
SLC22A4-201ENST00000200652 KIF3BO15066 747 aa24.76■■□□□ 1.55
SLC22A4-201ENST00000200652 CNGB1Q14028 1251 aaPredicted RBP24.76■■□□□ 1.55
SLC22A4-201ENST00000200652 BCANQ96GW7 911 aa24.76■■□□□ 1.55
SLC22A4-201ENST00000200652 KIDINS220Q9ULH0 1771 aa24.75■■□□□ 1.55
SLC22A4-201ENST00000200652 CLTCL1P53675 1640 aa24.74■■□□□ 1.55
SLC22A4-201ENST00000200652 MROH1Q8NDA8 1641 aa24.73■■□□□ 1.55
SLC22A4-201ENST00000200652 RNF17Q9BXT8 1623 aaKnown RBP24.73■■□□□ 1.55
SLC22A4-201ENST00000200652 ZBED9Q6R2W3 1325 aa24.71■■□□□ 1.55
SLC22A4-201ENST00000200652 ZNF518AQ6AHZ1 1483 aa24.71■■□□□ 1.55
SLC22A4-201ENST00000200652 MADDQ8WXG6 1647 aa24.7■■□□□ 1.54
SLC22A4-201ENST00000200652 TESK2Q96S53 571 aa24.7■■□□□ 1.54
SLC22A4-201ENST00000200652 CD109Q6YHK3 1445 aa24.69■■□□□ 1.54
SLC22A4-201ENST00000200652 COL17A1Q9UMD9 1497 aaPredicted RBP24.69■■□□□ 1.54
SLC22A4-201ENST00000200652 CFAP74Q9C0B2 1584 aa24.68■■□□□ 1.54
SLC22A4-201ENST00000200652 KTN1Q86UP2 1357 aaKnown RBP24.66■■□□□ 1.54
SLC22A4-201ENST00000200652 STAC3Q96MF2 364 aa24.65■■□□□ 1.54
SLC22A4-201ENST00000200652 DISP3Q9P2K9 1392 aa24.65■■□□□ 1.54
SLC22A4-201ENST00000200652 RALBP1Q15311 655 aa24.63■■□□□ 1.53
SLC22A4-201ENST00000200652 POGZQ7Z3K3 1410 aa24.62■■□□□ 1.53
SLC22A4-201ENST00000200652 NEURL4Q96JN8 1562 aa24.61■■□□□ 1.53
SLC22A4-201ENST00000200652 PNISRQ8TF01 805 aaKnown RBP24.61■■□□□ 1.53
SLC22A4-201ENST00000200652 EFCAB6Q5THR3 1501 aa24.61■■□□□ 1.53
SLC22A4-201ENST00000200652 IQGAP1P46940 1657 aa24.61■■□□□ 1.53
SLC22A4-201ENST00000200652 MYBBP1AQ9BQG0 1328 aaKnown RBP24.61■■□□□ 1.53
SLC22A4-201ENST00000200652 TMC1Q8TDI8 760 aa24.61■■□□□ 1.53
SLC22A4-201ENST00000200652 PER1O15534 1290 aaPredicted RBP24.59■■□□□ 1.53
SLC22A4-201ENST00000200652 TMF1P82094 1093 aa24.59■■□□□ 1.53
SLC22A4-201ENST00000200652 MLH3Q9UHC1 1453 aa24.59■■□□□ 1.53
SLC22A4-201ENST00000200652 PPRC1Q5VV67 1664 aaKnown RBP24.58■■□□□ 1.53
SLC22A4-201ENST00000200652 LMTK2Q8IWU2 1503 aa24.58■■□□□ 1.53
SLC22A4-201ENST00000200652 BRD4O60885 1362 aaPredicted RBP24.58■■□□□ 1.53
SLC22A4-201ENST00000200652 UGGT1Q9NYU2 1555 aa24.57■■□□□ 1.52
SLC22A4-201ENST00000200652 HECW2Q9P2P5 1572 aa24.56■■□□□ 1.52
SLC22A4-201ENST00000200652 PARD3Q8TEW0 1356 aa24.55■■□□□ 1.52
SLC22A4-201ENST00000200652 FRMPD1Q5SYB0 1578 aa24.55■■□□□ 1.52
SLC22A4-201ENST00000200652 KIF1BO60333 1816 aa24.55■■□□□ 1.52
SLC22A4-201ENST00000200652 KIAA1210Q9ULL0 1709 aa24.54■■□□□ 1.52
SLC22A4-201ENST00000200652 SCAF11Q99590 1463 aaKnown RBP24.53■■□□□ 1.52
SLC22A4-201ENST00000200652 LRPPRCP42704 1394 aaKnown RBP24.52■■□□□ 1.52
SLC22A4-201ENST00000200652 WASHC2CQ9Y4E1 1318 aa24.52■■□□□ 1.52
SLC22A4-201ENST00000200652 PANK3Q9H999 370 aa24.51■■□□□ 1.51
SLC22A4-201ENST00000200652 TSHZ2Q9NRE2 1034 aa24.51■■□□□ 1.51
SLC22A4-201ENST00000200652 NEO1Q92859 1461 aa24.51■■□□□ 1.51
SLC22A4-201ENST00000200652 IRX6P78412 446 aaPredicted RBP24.51■■□□□ 1.51
SLC22A4-201ENST00000200652 ABCA6Q8N139 1617 aa24.5■■□□□ 1.51
SLC22A4-201ENST00000200652 MAP3K4Q9Y6R4 1608 aa24.5■■□□□ 1.51
SLC22A4-201ENST00000200652 MYOM2P54296 1465 aa24.49■■□□□ 1.51
SLC22A4-201ENST00000200652 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
SLC22A4-201ENST00000200652 MROH2AA6NES4 1674 aa24.48■■□□□ 1.51
SLC22A4-201ENST00000200652 NLRP13Q86W25 1043 aa24.48■■□□□ 1.51
SLC22A4-201ENST00000200652 SMG6Q86US8 1419 aaKnown RBP24.47■■□□□ 1.51
SLC22A4-201ENST00000200652 ERICH6BQ5W0A0 696 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms