RNA–Protein interactions for RNA: ENST00000175091.4

LAPTM4A-201, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LAPTM4A, Length 1,765 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-201ENST00000175091 PPRC1Q5VV67 1664 aaKnown RBP22.44■■□□□ 1.18
LAPTM4A-201ENST00000175091 DIEXFQ68CQ4 756 aaKnown RBP22.43■■□□□ 1.18
LAPTM4A-201ENST00000175091 PRDM15P57071 1507 aaPredicted RBP22.42■■□□□ 1.18
LAPTM4A-201ENST00000175091 MROH1Q8NDA8 1641 aa22.42■■□□□ 1.18
LAPTM4A-201ENST00000175091 VWDEQ8N2E2 1590 aa22.42■■□□□ 1.18
LAPTM4A-201ENST00000175091 ABCA6Q8N139 1617 aa22.41■■□□□ 1.18
LAPTM4A-201ENST00000175091 KIF13AQ9H1H9 1805 aa22.4■■□□□ 1.18
LAPTM4A-201ENST00000175091 BCORL1Q5H9F3 1711 aa22.39■■□□□ 1.18
LAPTM4A-201ENST00000175091 DHX29Q7Z478 1369 aaKnown RBP22.39■■□□□ 1.18
LAPTM4A-201ENST00000175091 FRMPD1Q5SYB0 1578 aa22.39■■□□□ 1.18
LAPTM4A-201ENST00000175091 RNF17Q9BXT8 1623 aaKnown RBP22.39■■□□□ 1.17
LAPTM4A-201ENST00000175091 TET3O43151 1660 aa22.38■■□□□ 1.17
LAPTM4A-201ENST00000175091 E9PCH4 1651 aa22.37■■□□□ 1.17
LAPTM4A-201ENST00000175091 L3MBTL2Q969R5 705 aa22.37■■□□□ 1.17
LAPTM4A-201ENST00000175091 ATP10AO60312 1499 aa22.36■■□□□ 1.17
LAPTM4A-201ENST00000175091 A2MP01023 1474 aa22.36■■□□□ 1.17
LAPTM4A-201ENST00000175091 TSPOAP1O95153 1857 aa22.36■■□□□ 1.17
LAPTM4A-201ENST00000175091 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.35■■□□□ 1.17
LAPTM4A-201ENST00000175091 DIP2CQ9Y2E4 1556 aa22.34■■□□□ 1.17
LAPTM4A-201ENST00000175091 PLA2R1Q13018 1463 aa22.33■■□□□ 1.17
LAPTM4A-201ENST00000175091 ZMYM4Q5VZL5 1548 aa22.33■■□□□ 1.16
LAPTM4A-201ENST00000175091 FAM69CQ0P6D2 419 aa22.33■■□□□ 1.16
LAPTM4A-201ENST00000175091 SPHKAPQ2M3C7 1700 aa22.31■■□□□ 1.16
LAPTM4A-201ENST00000175091 MYT1LQ9UL68 1186 aa22.3■■□□□ 1.16
LAPTM4A-201ENST00000175091 CCDC144AA2RUR9 1427 aa22.3■■□□□ 1.16
LAPTM4A-201ENST00000175091 TRPM2O94759 1503 aa22.27■■□□□ 1.16
LAPTM4A-201ENST00000175091 CEP152O94986 1710 aa22.27■■□□□ 1.16
LAPTM4A-201ENST00000175091 EFCAB6Q5THR3 1501 aa22.27■■□□□ 1.16
LAPTM4A-201ENST00000175091 LMTK2Q8IWU2 1503 aa22.27■■□□□ 1.16
LAPTM4A-201ENST00000175091 KANK1Q14678 1352 aa22.27■■□□□ 1.16
LAPTM4A-201ENST00000175091 RAPGEF3O95398 923 aa22.26■■□□□ 1.15
LAPTM4A-201ENST00000175091 KIF3BO15066 747 aa22.25■■□□□ 1.15
LAPTM4A-201ENST00000175091 UHRF1BP1Q6BDS2 1440 aa22.24■■□□□ 1.15
LAPTM4A-201ENST00000175091 PTPRTO14522 1441 aa22.22■■□□□ 1.15
LAPTM4A-201ENST00000175091 NBPF8Q3BBV2 869 aa22.22■■□□□ 1.15
LAPTM4A-201ENST00000175091 YEATS2Q9ULM3 1422 aa22.2■■□□□ 1.14
LAPTM4A-201ENST00000175091 CLTCL1P53675 1640 aa22.19■■□□□ 1.14
LAPTM4A-201ENST00000175091 RALGAPBQ86X10 1494 aa22.17■■□□□ 1.14
LAPTM4A-201ENST00000175091 REREQ9P2R6 1566 aa22.17■■□□□ 1.14
LAPTM4A-201ENST00000175091 ZC3H13Q5T200 1668 aaKnown RBP22.17■■□□□ 1.14
LAPTM4A-201ENST00000175091 ABCC3O15438 1527 aa22.15■■□□□ 1.14
LAPTM4A-201ENST00000175091 CAMSAP1Q5T5Y3 1602 aa22.15■■□□□ 1.14
LAPTM4A-201ENST00000175091 NEURL4Q96JN8 1562 aa22.14■■□□□ 1.13
LAPTM4A-201ENST00000175091 SPATA31E1Q6ZUB1 1445 aa22.13■■□□□ 1.13
LAPTM4A-201ENST00000175091 POLR1AO95602 1720 aaPredicted RBP22.13■■□□□ 1.13
LAPTM4A-201ENST00000175091 TRPM1Q7Z4N2 1603 aa22.13■■□□□ 1.13
LAPTM4A-201ENST00000175091 HIRIP3Q9BW71 556 aaPredicted RBP22.12■■□□□ 1.13
LAPTM4A-201ENST00000175091 ARHGEF40Q8TER5 1519 aa22.1■■□□□ 1.13
LAPTM4A-201ENST00000175091 PRAG1Q86YV5 1406 aa22.1■■□□□ 1.13
LAPTM4A-201ENST00000175091 EIF4G2P78344 907 aaKnown RBP eCLIP22.1■■□□□ 1.13
LAPTM4A-201ENST00000175091 HSPA5P11021 654 aaKnown RBP22.09■■□□□ 1.13
LAPTM4A-201ENST00000175091 NPATQ14207 1427 aa22.08■■□□□ 1.12
LAPTM4A-201ENST00000175091 KIF1BO60333 1816 aa22.08■■□□□ 1.12
LAPTM4A-201ENST00000175091 COL17A1Q9UMD9 1497 aaPredicted RBP22.07■■□□□ 1.12
LAPTM4A-201ENST00000175091 UGGT1Q9NYU2 1555 aa22.06■■□□□ 1.12
LAPTM4A-201ENST00000175091 DCAF11Q8TEB1 546 aa22.06■■□□□ 1.12
LAPTM4A-201ENST00000175091 AGLP35573 1532 aa22.06■■□□□ 1.12
LAPTM4A-201ENST00000175091 LAMC1P11047 1609 aa22.05■■□□□ 1.12
LAPTM4A-201ENST00000175091 MIER1Q8N108 512 aa22.05■■□□□ 1.12
LAPTM4A-201ENST00000175091 SIGLEC1Q9BZZ2 1709 aa22.05■■□□□ 1.12
LAPTM4A-201ENST00000175091 ZNF326Q5BKZ1 582 aaKnown RBP22.04■■□□□ 1.12
LAPTM4A-201ENST00000175091 MADDQ8WXG6 1647 aa22.04■■□□□ 1.12
LAPTM4A-201ENST00000175091 MROH2AA6NES4 1674 aa22.04■■□□□ 1.12
LAPTM4A-201ENST00000175091 GGT6Q6P531 493 aa22.04■■□□□ 1.12
LAPTM4A-201ENST00000175091 IFT172Q9UG01 1749 aa22.03■■□□□ 1.12
LAPTM4A-201ENST00000175091 USP47Q96K76 1375 aa22.01■■□□□ 1.11
LAPTM4A-201ENST00000175091 CNTLNQ9NXG0 1405 aa22.01■■□□□ 1.11
LAPTM4A-201ENST00000175091 RGL3Q3MIN7 710 aa22.01■■□□□ 1.11
LAPTM4A-201ENST00000175091 ARHGAP31Q2M1Z3 1444 aa22.01■■□□□ 1.11
LAPTM4A-201ENST00000175091 KDM2AQ9Y2K7 1162 aa22■■□□□ 1.11
LAPTM4A-201ENST00000175091 ADGRB3O60242 1522 aa22■■□□□ 1.11
LAPTM4A-201ENST00000175091 PIK3C2BO00750 1634 aa22■■□□□ 1.11
LAPTM4A-201ENST00000175091 WASHC2CQ9Y4E1 1318 aa21.99■■□□□ 1.11
LAPTM4A-201ENST00000175091 CFAP65Q6ZU64 1925 aaKnown RBP21.99■■□□□ 1.11
LAPTM4A-201ENST00000175091 NOS1P29475 1434 aa21.98■■□□□ 1.11
LAPTM4A-201ENST00000175091 SYNMO15061 1565 aa21.97■■□□□ 1.11
LAPTM4A-201ENST00000175091 GPRASP1Q5JY77 1395 aa21.97■■□□□ 1.11
LAPTM4A-201ENST00000175091 DDX10Q13206 875 aaKnown RBP21.97■■□□□ 1.11
LAPTM4A-201ENST00000175091 WASHC2AQ641Q2 1341 aa21.97■■□□□ 1.11
LAPTM4A-201ENST00000175091 PREX1Q8TCU6 1659 aa21.96■■□□□ 1.11
LAPTM4A-201ENST00000175091 ROCK2O75116 1388 aaKnown RBP21.95■■□□□ 1.1
LAPTM4A-201ENST00000175091 MYOM2P54296 1465 aa21.94■■□□□ 1.1
LAPTM4A-201ENST00000175091 KIAA1210Q9ULL0 1709 aa21.94■■□□□ 1.1
LAPTM4A-201ENST00000175091 CARD11Q9BXL7 1154 aa21.92■■□□□ 1.1
LAPTM4A-201ENST00000175091 CCDC7Q96M83 1385 aa21.92■■□□□ 1.1
LAPTM4A-201ENST00000175091 CLTCQ00610 1675 aaKnown RBP21.91■■□□□ 1.1
LAPTM4A-201ENST00000175091 STAC3Q96MF2 364 aa21.91■■□□□ 1.1
LAPTM4A-201ENST00000175091 PPLO60437 1756 aa21.91■■□□□ 1.1
LAPTM4A-201ENST00000175091 IQGAP1P46940 1657 aa21.89■■□□□ 1.1
LAPTM4A-201ENST00000175091 C11orf95C9JLR9 678 aaPredicted RBP21.88■■□□□ 1.09
LAPTM4A-201ENST00000175091 NRXN1Q9ULB1 1477 aa21.87■■□□□ 1.09
LAPTM4A-201ENST00000175091 KIF7Q2M1P5 1343 aa21.86■■□□□ 1.09
LAPTM4A-201ENST00000175091 PPP6R1Q9UPN7 881 aa21.85■■□□□ 1.09
LAPTM4A-201ENST00000175091 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
LAPTM4A-201ENST00000175091 ERVK-7P63135 1459 aa21.83■■□□□ 1.08
LAPTM4A-201ENST00000175091 ARID4BQ4LE39 1312 aaPredicted RBP21.81■■□□□ 1.08
LAPTM4A-201ENST00000175091 SPATA31D1Q6ZQQ2 1576 aa21.81■■□□□ 1.08
LAPTM4A-201ENST00000175091 MYO5BQ9ULV0 1848 aa21.8■■□□□ 1.08
LAPTM4A-201ENST00000175091 NEXMIFQ5QGS0 1516 aa21.79■■□□□ 1.08
LAPTM4A-201ENST00000175091 TMEM131LA2VDJ0 1609 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms