RNA–Protein interactions for RNA: ENST00000165086.8

NPIPB4-201, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 464 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-201ENST00000165086 NEURL4Q96JN8 1562 aa12.9□□□□□ -0.34
NPIPB4-201ENST00000165086 LRRIQ1Q96JM4 1722 aa12.9□□□□□ -0.34
NPIPB4-201ENST00000165086 PLXNC1O60486 1568 aa12.9□□□□□ -0.35
NPIPB4-201ENST00000165086 SAMD9LQ8IVG5 1584 aa12.9□□□□□ -0.35
NPIPB4-201ENST00000165086 TOM1O60784 492 aa12.89□□□□□ -0.35
NPIPB4-201ENST00000165086 CDK11AQ9UQ88 783 aaPredicted RBP12.89□□□□□ -0.35
NPIPB4-201ENST00000165086 FMN1Q68DA7 1419 aa12.88□□□□□ -0.35
NPIPB4-201ENST00000165086 DSG3P32926 999 aa12.88□□□□□ -0.35
NPIPB4-201ENST00000165086 SHANK2Q9UPX8 1470 aa12.88□□□□□ -0.35
NPIPB4-201ENST00000165086 DNMT1P26358 1616 aaKnown RBP12.88□□□□□ -0.35
NPIPB4-201ENST00000165086 ZBTB22O15209 634 aa12.87□□□□□ -0.35
NPIPB4-201ENST00000165086 EEA1Q15075 1411 aa12.87□□□□□ -0.35
NPIPB4-201ENST00000165086 A2ML1A8K2U0 1454 aa12.86□□□□□ -0.35
NPIPB4-201ENST00000165086 VWDEQ8N2E2 1590 aa12.86□□□□□ -0.35
NPIPB4-201ENST00000165086 CDC42BPAQ5VT25 1732 aa12.85□□□□□ -0.35
NPIPB4-201ENST00000165086 ZNF219Q9P2Y4 722 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-201ENST00000165086 ATP1B4Q9UN42 357 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-201ENST00000165086 INO80Q9ULG1 1556 aaPredicted RBP12.84□□□□□ -0.35
NPIPB4-201ENST00000165086 ATP7AQ04656 1500 aa12.83□□□□□ -0.35
NPIPB4-201ENST00000165086 SYCP2Q9BX26 1530 aa12.83□□□□□ -0.35
NPIPB4-201ENST00000165086 ARHGAP35Q9NRY4 1499 aa12.83□□□□□ -0.36
NPIPB4-201ENST00000165086 RNF17Q9BXT8 1623 aaKnown RBP12.81□□□□□ -0.36
NPIPB4-201ENST00000165086 A2MP01023 1474 aa12.8□□□□□ -0.36
NPIPB4-201ENST00000165086 RGS17Q9UGC6 210 aaPredicted RBP12.8□□□□□ -0.36
NPIPB4-201ENST00000165086 SYNMO15061 1565 aa12.79□□□□□ -0.36
NPIPB4-201ENST00000165086 SPAG9O60271 1321 aaKnown RBP12.78□□□□□ -0.36
NPIPB4-201ENST00000165086 STRCP1A6NGW2 1772 aa12.77□□□□□ -0.36
NPIPB4-201ENST00000165086 DEPDC5O75140 1603 aa12.77□□□□□ -0.37
NPIPB4-201ENST00000165086 ADGBQ8N7X0 1667 aa12.77□□□□□ -0.37
NPIPB4-201ENST00000165086 MED14O60244 1454 aa12.76□□□□□ -0.37
NPIPB4-201ENST00000165086 CCDC18Q5T9S5 1454 aa12.76□□□□□ -0.37
NPIPB4-201ENST00000165086 LRRC7Q96NW7 1537 aa12.76□□□□□ -0.37
NPIPB4-201ENST00000165086 IQGAP1P46940 1657 aa12.75□□□□□ -0.37
NPIPB4-201ENST00000165086 GGT6Q6P531 493 aa12.75□□□□□ -0.37
NPIPB4-201ENST00000165086 TNRQ92752 1358 aa12.75□□□□□ -0.37
NPIPB4-201ENST00000165086 NPHP4O75161 1426 aaPredicted RBP12.74□□□□□ -0.37
NPIPB4-201ENST00000165086 SETD1AO15047 1707 aaKnown RBP12.74□□□□□ -0.37
NPIPB4-201ENST00000165086 GPATCH8Q9UKJ3 1502 aaKnown RBP12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 PZPP20742 1482 aa12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 KIAA1107Q9UPP5 1409 aa12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 ZNF777Q9ULD5 760 aaPredicted RBP12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 FAM135AQ9P2D6 1515 aa12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 PLEKHH2Q8IVE3 1493 aa12.72□□□□□ -0.37
NPIPB4-201ENST00000165086 UGGT1Q9NYU2 1555 aa12.71□□□□□ -0.37
NPIPB4-201ENST00000165086 KDM5DQ9BY66 1539 aa12.71□□□□□ -0.38
NPIPB4-201ENST00000165086 CASKIN1Q8WXD9 1431 aa12.71□□□□□ -0.38
NPIPB4-201ENST00000165086 HNRNPMP52272 730 aaKnown RBP eCLIP12.7□□□□□ -0.38
NPIPB4-201ENST00000165086 ANKLE2Q86XL3 938 aa12.7□□□□□ -0.38
NPIPB4-201ENST00000165086 NLRP1Q9C000 1473 aa12.7□□□□□ -0.38
NPIPB4-201ENST00000165086 ABCB7O75027 752 aa12.69□□□□□ -0.38
NPIPB4-201ENST00000165086 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
NPIPB4-201ENST00000165086 ZC3H13Q5T200 1668 aaKnown RBP12.69□□□□□ -0.38
NPIPB4-201ENST00000165086 FBXO31Q5XUX0 539 aaPredicted RBP12.68□□□□□ -0.38
NPIPB4-201ENST00000165086 XIRP1Q702N8 1843 aaKnown RBP12.67□□□□□ -0.38
NPIPB4-201ENST00000165086 MIA2Q96PC5 1412 aa12.65□□□□□ -0.38
NPIPB4-201ENST00000165086 UBTFP17480 764 aaKnown RBP12.65□□□□□ -0.38
NPIPB4-201ENST00000165086 THEMISQ8N1K5 641 aaPredicted RBP12.65□□□□□ -0.38
NPIPB4-201ENST00000165086 ATF5Q9Y2D1 282 aaPredicted RBP12.65□□□□□ -0.38
NPIPB4-201ENST00000165086 FYCO1Q9BQS8 1478 aa12.65□□□□□ -0.38
NPIPB4-201ENST00000165086 DHX29Q7Z478 1369 aaKnown RBP12.63□□□□□ -0.39
NPIPB4-201ENST00000165086 RTEL1-TNFRSF6BF6WH68 1400 aa12.62□□□□□ -0.39
NPIPB4-201ENST00000165086 MBD5Q9P267 1494 aa12.62□□□□□ -0.39
NPIPB4-201ENST00000165086 EHMT2Q96KQ7 1210 aa12.62□□□□□ -0.39
NPIPB4-201ENST00000165086 CFDP1Q9UEE9 299 aaPredicted RBP12.62□□□□□ -0.39
NPIPB4-201ENST00000165086 FAM135BQ49AJ0 1406 aa12.61□□□□□ -0.39
NPIPB4-201ENST00000165086 CCNB3Q8WWL7 1395 aa12.6□□□□□ -0.39
NPIPB4-201ENST00000165086 ROBO1Q9Y6N7 1651 aa12.6□□□□□ -0.39
NPIPB4-201ENST00000165086 ATXN8OSP0DMR3 200 aa12.59□□□□□ -0.39
NPIPB4-201ENST00000165086 ZEB1P37275 1124 aaPredicted RBP12.59□□□□□ -0.39
NPIPB4-201ENST00000165086 TIAM1Q13009 1591 aa12.59□□□□□ -0.39
NPIPB4-201ENST00000165086 UBR1Q8IWV7 1749 aa12.59□□□□□ -0.39
NPIPB4-201ENST00000165086 KIF3BO15066 747 aa12.58□□□□□ -0.4
NPIPB4-201ENST00000165086 SCAF11Q99590 1463 aaKnown RBP12.58□□□□□ -0.4
NPIPB4-201ENST00000165086 WASHC2CQ9Y4E1 1318 aa12.58□□□□□ -0.4
NPIPB4-201ENST00000165086 POLA2Q14181 598 aa12.57□□□□□ -0.4
NPIPB4-201ENST00000165086 ERVK-7P63135 1459 aa12.56□□□□□ -0.4
NPIPB4-201ENST00000165086 ABCC3O15438 1527 aa12.56□□□□□ -0.4
NPIPB4-201ENST00000165086 ZNF644Q9H582 1327 aaPredicted RBP12.56□□□□□ -0.4
NPIPB4-201ENST00000165086 ARHGAP23Q9P227 1491 aa12.55□□□□□ -0.4
NPIPB4-201ENST00000165086 MAP3K1Q13233 1512 aa12.55□□□□□ -0.4
NPIPB4-201ENST00000165086 NCOA2Q15596 1464 aa12.54□□□□□ -0.4
NPIPB4-201ENST00000165086 CCDC141Q6ZP82 1450 aa12.54□□□□□ -0.4
NPIPB4-201ENST00000165086 SLIT1O75093 1534 aa12.54□□□□□ -0.4
NPIPB4-201ENST00000165086 UPF1Q92900 1129 aaKnown RBP eCLIP12.54□□□□□ -0.4
NPIPB4-201ENST00000165086 LRRC9Q6ZRR7 1453 aa12.53□□□□□ -0.4
NPIPB4-201ENST00000165086 PHLPP1O60346 1717 aa12.51□□□□□ -0.41
NPIPB4-201ENST00000165086 TMEM94Q12767 1356 aa12.51□□□□□ -0.41
NPIPB4-201ENST00000165086 SRCAPQ6ZRS2 3230 aa12.51□□□□□ -0.41
NPIPB4-201ENST00000165086 EHBP1L1Q8N3D4 1523 aa12.51□□□□□ -0.41
NPIPB4-201ENST00000165086 MTUS2Q5JR59 1369 aa12.5□□□□□ -0.41
NPIPB4-201ENST00000165086 LRP6O75581 1613 aa12.5□□□□□ -0.41
NPIPB4-201ENST00000165086 MROH1Q8NDA8 1641 aa12.5□□□□□ -0.41
NPIPB4-201ENST00000165086 COL16A1Q07092 1604 aaPredicted RBP12.49□□□□□ -0.41
NPIPB4-201ENST00000165086 CAMSAP2Q08AD1 1489 aa12.49□□□□□ -0.41
NPIPB4-201ENST00000165086 JCADQ9P266 1359 aa12.49□□□□□ -0.41
NPIPB4-201ENST00000165086 LTKP29376 864 aa12.49□□□□□ -0.41
NPIPB4-201ENST00000165086 CEP152O94986 1710 aa12.48□□□□□ -0.41
NPIPB4-201ENST00000165086 EIF2AK4Q9P2K8 1649 aaKnown RBP12.48□□□□□ -0.41
NPIPB4-201ENST00000165086 NWD1Q149M9 1564 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms