RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 AMER1Q5JTC6 1135 aaPredicted RBP23.7■■□□□ 1.38
MBD3-201ENST00000156825 PRKRIP1Q9H875 184 aaPredicted RBP23.7■■□□□ 1.38
MBD3-201ENST00000156825 GORABQ5T7V8 394 aa23.69■■□□□ 1.38
MBD3-201ENST00000156825 GNL2Q13823 731 aaKnown RBP23.69■■□□□ 1.38
MBD3-201ENST00000156825 PMFBP1Q8TBY8 1022 aa23.68■■□□□ 1.38
MBD3-201ENST00000156825 MYBBP1AQ9BQG0 1328 aaKnown RBP23.67■■□□□ 1.38
MBD3-201ENST00000156825 DRC7Q8IY82 874 aa23.66■■□□□ 1.38
MBD3-201ENST00000156825 KIF15Q9NS87 1388 aa23.65■■□□□ 1.38
MBD3-201ENST00000156825 TAF7LQ5H9L4 462 aa23.65■■□□□ 1.38
MBD3-201ENST00000156825 USP47Q96K76 1375 aa23.64■■□□□ 1.37
MBD3-201ENST00000156825 SMARCA4P51532 1647 aa23.63■■□□□ 1.37
MBD3-201ENST00000156825 APAF1O14727 1248 aa23.63■■□□□ 1.37
MBD3-201ENST00000156825 RAD54L2Q9Y4B4 1467 aa23.62■■□□□ 1.37
MBD3-201ENST00000156825 GOLGA6L6A8MZA4 724 aa23.62■■□□□ 1.37
MBD3-201ENST00000156825 PDE3BQ13370 1112 aa23.61■■□□□ 1.37
MBD3-201ENST00000156825 IGF1RP08069 1367 aa23.61■■□□□ 1.37
MBD3-201ENST00000156825 EXOC6Q8TAG9 804 aa23.61■■□□□ 1.37
MBD3-201ENST00000156825 CLSTN1O94985 981 aa23.6■■□□□ 1.37
MBD3-201ENST00000156825 VGFO15240 615 aaPredicted RBP23.6■■□□□ 1.37
MBD3-201ENST00000156825 HMMRO75330 724 aa23.6■■□□□ 1.37
MBD3-201ENST00000156825 CFAP44Q96MT7 982 aa23.59■■□□□ 1.37
MBD3-201ENST00000156825 NRDCO43847 1150 aa23.59■■□□□ 1.37
MBD3-201ENST00000156825 FOXD4L5Q5VV16 416 aaPredicted RBP23.58■■□□□ 1.37
MBD3-201ENST00000156825 FOXD4L4Q8WXT5 416 aaPredicted RBP23.58■■□□□ 1.37
MBD3-201ENST00000156825 COG6Q9Y2V7 657 aa23.58■■□□□ 1.37
MBD3-201ENST00000156825 SLC4A3P48751 1232 aa23.58■■□□□ 1.36
MBD3-201ENST00000156825 COG3Q96JB2 828 aa23.58■■□□□ 1.36
MBD3-201ENST00000156825 GBP4Q96PP9 640 aa23.58■■□□□ 1.36
MBD3-201ENST00000156825 MSNP26038 577 aaKnown RBP23.57■■□□□ 1.36
MBD3-201ENST00000156825 LMOD3Q0VAK6 560 aa23.56■■□□□ 1.36
MBD3-201ENST00000156825 NGEFQ8N5V2 710 aa23.56■■□□□ 1.36
MBD3-201ENST00000156825 NECTIN2Q92692 538 aa23.56■■□□□ 1.36
MBD3-201ENST00000156825 CGNL1Q0VF96 1302 aa23.55■■□□□ 1.36
MBD3-201ENST00000156825 L1TD1Q5T7N2 865 aaKnown RBP23.55■■□□□ 1.36
MBD3-201ENST00000156825 EVC2Q86UK5 1308 aa23.54■■□□□ 1.36
MBD3-201ENST00000156825 FGD5Q6ZNL6 1462 aa23.54■■□□□ 1.36
MBD3-201ENST00000156825 CRBNQ96SW2 442 aa23.54■■□□□ 1.36
MBD3-201ENST00000156825 IPO9Q96P70 1041 aaKnown RBP23.53■■□□□ 1.36
MBD3-201ENST00000156825 NCBP3Q53F19 620 aaKnown RBP23.53■■□□□ 1.36
MBD3-201ENST00000156825 HSP90B1P14625 803 aaKnown RBP23.52■■□□□ 1.36
MBD3-201ENST00000156825 ANKRD45Q5TZF3 282 aa23.52■■□□□ 1.36
MBD3-201ENST00000156825 OSCARQ8IYS5 282 aa23.52■■□□□ 1.35
MBD3-201ENST00000156825 PHLDB1Q86UU1 1377 aa23.51■■□□□ 1.35
MBD3-201ENST00000156825 EIF2S2P20042 333 aaKnown RBP23.51■■□□□ 1.35
MBD3-201ENST00000156825 GTF2E1P29083 439 aaPredicted RBP23.5■■□□□ 1.35
MBD3-201ENST00000156825 GAPVD1Q14C86 1478 aa23.5■■□□□ 1.35
MBD3-201ENST00000156825 GPATCH3Q96I76 525 aa23.5■■□□□ 1.35
MBD3-201ENST00000156825 TOMM22Q9NS69 142 aa23.49■■□□□ 1.35
MBD3-201ENST00000156825 RILPL2Q969X0 211 aa23.49■■□□□ 1.35
MBD3-201ENST00000156825 CHMP4AQ9BY43 222 aa23.49■■□□□ 1.35
MBD3-201ENST00000156825 TMEM132EQ6IEE7 984 aa23.47■■□□□ 1.35
MBD3-201ENST00000156825 AQRO60306 1485 aaKnown RBP eCLIP23.47■■□□□ 1.356e-7■■■■□ 21.9
MBD3-201ENST00000156825 RRP1P56182 461 aaKnown RBP23.47■■□□□ 1.35
MBD3-201ENST00000156825 ARID3AQ99856 593 aa23.47■■□□□ 1.35
MBD3-201ENST00000156825 FOXD4L6Q3SYB3 417 aaPredicted RBP23.47■■□□□ 1.35
MBD3-201ENST00000156825 FOXD4L3Q6VB84 417 aaPredicted RBP23.47■■□□□ 1.35
MBD3-201ENST00000156825 CHAF1AQ13111 956 aaPredicted RBP23.47■■□□□ 1.35
MBD3-201ENST00000156825 FRAT2O75474 233 aaPredicted RBP23.46■■□□□ 1.35
MBD3-201ENST00000156825 TEFQ10587 303 aa23.46■■□□□ 1.35
MBD3-201ENST00000156825 ZKSCAN2Q63HK3 967 aa23.46■■□□□ 1.35
MBD3-201ENST00000156825 E9PSI1 815 aa23.45■■□□□ 1.35
MBD3-201ENST00000156825 FAM69CQ0P6D2 419 aa23.45■■□□□ 1.35
MBD3-201ENST00000156825 PDE4AP27815 886 aa23.43■■□□□ 1.34
MBD3-201ENST00000156825 C1orf141Q5JVX7 400 aa23.43■■□□□ 1.34
MBD3-201ENST00000156825 AFAP1Q8N556 730 aa23.43■■□□□ 1.34
MBD3-201ENST00000156825 RIPK4P57078 832 aa23.42■■□□□ 1.34
MBD3-201ENST00000156825 HDAC5Q9UQL6 1122 aa23.42■■□□□ 1.34
MBD3-201ENST00000156825 ZBED9Q6R2W3 1325 aa23.42■■□□□ 1.34
MBD3-201ENST00000156825 DIAPH1O60610 1272 aaKnown RBP23.42■■□□□ 1.34
MBD3-201ENST00000156825 HMOX1P09601 288 aa23.42■■□□□ 1.34
MBD3-201ENST00000156825 GGNBP2Q9H3C7 697 aa23.42■■□□□ 1.34
MBD3-201ENST00000156825 UACAQ9BZF9 1416 aa23.41■■□□□ 1.34
MBD3-201ENST00000156825 KIF7Q2M1P5 1343 aa23.41■■□□□ 1.34
MBD3-201ENST00000156825 NUTM2GQ5VZR2 741 aa23.41■■□□□ 1.34
MBD3-201ENST00000156825 FGD6Q6ZV73 1430 aa23.4■■□□□ 1.34
MBD3-201ENST00000156825 EVA1CP58658 441 aa23.4■■□□□ 1.34
MBD3-201ENST00000156825 CENPQQ7L2Z9 268 aaPredicted RBP23.39■■□□□ 1.33
MBD3-201ENST00000156825 MYOM3Q5VTT5 1437 aa23.39■■□□□ 1.33
MBD3-201ENST00000156825 TMX4Q9H1E5 349 aaPredicted RBP23.38■■□□□ 1.33
MBD3-201ENST00000156825 CABP2Q9NPB3 220 aa23.38■■□□□ 1.33
MBD3-201ENST00000156825 G3V3G9 751 aa23.36■■□□□ 1.33
MBD3-201ENST00000156825 DCAF8Q5TAQ9 597 aa23.36■■□□□ 1.33
MBD3-201ENST00000156825 PSME1Q06323 249 aa23.36■■□□□ 1.33
MBD3-201ENST00000156825 CREBRFQ8IUR6 639 aa23.35■■□□□ 1.33
MBD3-201ENST00000156825 SYTL4Q96C24 671 aaPredicted RBP23.35■■□□□ 1.33
MBD3-201ENST00000156825 GOLGA6L3A6NEY3 463 aa23.34■■□□□ 1.33
MBD3-201ENST00000156825 ST18O60284 1047 aa23.34■■□□□ 1.33
MBD3-201ENST00000156825 FAM161AQ3B820 660 aa23.34■■□□□ 1.33
MBD3-201ENST00000156825 KIAA2012Q0VF49 1180 aa23.33■■□□□ 1.33
MBD3-201ENST00000156825 C9orf78Q9NZ63 289 aaPredicted RBP23.33■■□□□ 1.32
MBD3-201ENST00000156825 HTATSF1O43719 755 aaKnown RBP23.32■■□□□ 1.32
MBD3-201ENST00000156825 RASSF8Q8NHQ8 419 aa23.32■■□□□ 1.32
MBD3-201ENST00000156825 SYAP1Q96A49 352 aaPredicted RBP23.32■■□□□ 1.32
MBD3-201ENST00000156825 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
MBD3-201ENST00000156825 KIF16BQ96L93 1317 aa23.31■■□□□ 1.32
MBD3-201ENST00000156825 CCDC7Q96M83 1385 aa23.31■■□□□ 1.32
MBD3-201ENST00000156825 TTC5Q8N0Z6 440 aa23.31■■□□□ 1.32
MBD3-201ENST00000156825 FKBP5Q13451 457 aaPredicted RBP23.3■■□□□ 1.32
MBD3-201ENST00000156825 ANKRD50Q9ULJ7 1429 aa23.29■■□□□ 1.32
MBD3-201ENST00000156825 DZIP1LQ8IYY4 767 aaKnown RBP23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms