RNA–Protein interactions for RNA: ENSMUST00000202945.3

Ube3a-216, Transcript of Ubiquitin-protein ligase E3A, mousemouse

TSL 1 (best) BASIC

Gene Ube3a, Length 3,889 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3a-216ENSMUST00000202945 Znf710Q3U288 666 aa18.3■□□□□ 0.52
Ube3a-216ENSMUST00000202945 Ncoa1P70365 1447 aa18.3■□□□□ 0.52
Ube3a-216ENSMUST00000202945 Fmn2Q9JL04 1578 aa18.29■□□□□ 0.52
Ube3a-216ENSMUST00000202945 NrdcQ8BHG1 1161 aa18.28■□□□□ 0.52
Ube3a-216ENSMUST00000202945 Spag9Q58A65 1321 aaKnown RBP18.28■□□□□ 0.52
Ube3a-216ENSMUST00000202945 Exoc6Q8R313 802 aa18.28■□□□□ 0.52
Ube3a-216ENSMUST00000202945 Chd1P40201 1711 aa18.27■□□□□ 0.52
Ube3a-216ENSMUST00000202945 Wdr43Q6ZQL4 677 aaKnown RBP18.26■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Cd109Q8R422 1442 aa18.26■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Kif21bQ9QXL1 1668 aa18.26■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Hdac5Q9Z2V6 1113 aa18.25■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Mug2P28666 1451 aa18.25■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Cdk13Q69ZA1 1511 aaKnown RBP18.24■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Lrrc9Q8CDN9 1456 aa18.23■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Cwc22Q8C5N3 908 aaKnown RBP18.23■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Ythdc2B2RR83 1445 aaKnown RBP18.23■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Ifit1bl1D3Z6F0 470 aa18.23■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Supt16hQ920B9 1047 aa18.23■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Trpm2Q91YD4 1506 aa18.23■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Gm32742A0A1B0GT42 1604 aa18.22■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Washc2Q6PGL7 1334 aa18.21■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Myom3A2ABU4 1439 aa18.21■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Pde4cQ3UEI1 686 aa18.21■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Asxl1P59598 1514 aa18.21■□□□□ 0.51
Ube3a-216ENSMUST00000202945 Adgrl2Q8JZZ7 1487 aa18.21■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Slc4a3P16283 1227 aa18.2■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Rnf17Q99MV7 1640 aa18.2■□□□□ 0.5
Ube3a-216ENSMUST00000202945 NhsB1AV60 1647 aa18.19■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Mroh3A0A1D5RM54 893 aa18.19■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Kif3bQ61771 747 aa18.19■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Os9Q8K2C7 672 aa18.19■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Atp7aQ64430 1491 aa18.18■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Kdm2aP59997 1161 aa18.18■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Gm13695A2AK44 830 aa18.17■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Slc4a2P13808 1237 aaKnown RBP18.16■□□□□ 0.5
Ube3a-216ENSMUST00000202945 AI481877A2ALV5 1481 aa18.15■□□□□ 0.5
Ube3a-216ENSMUST00000202945 PtprgQ05909 1442 aa18.15■□□□□ 0.5
Ube3a-216ENSMUST00000202945 Dot1lQ6XZL8 1540 aa18.14■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Mbd5B1AYB6 1498 aa18.13■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Cfap74Q3UY96 1578 aa18.13■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Cdc42bpbQ7TT50 1713 aa18.13■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Prdm16A2A935 1275 aa18.13■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Lemd3Q9WU40 921 aa18.13■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Stk24Q99KH8 431 aa18.11■□□□□ 0.49
Ube3a-216ENSMUST00000202945 PtprtQ99M80 1454 aa18.11■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Sall3Q62255 1320 aa18.1■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Abca8bQ8K440 1620 aa18.1■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Igf1rQ60751 1373 aa18.1■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Naip6Q9JIB6 1403 aa18.08■□□□□ 0.49
Ube3a-216ENSMUST00000202945 Tarbp1E9Q368 1579 aa18.07■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Gapvd1Q6PAR5 1458 aa18.07■□□□□ 0.48
Ube3a-216ENSMUST00000202945 RalgapbQ8BQZ4 1484 aa18.07■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Polr3aB2RXC6 1390 aa18.07■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Plekhg5Q66T02 1073 aa18.06■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Pabpn1Q8CCS6 302 aaKnown RBP18.06■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Abcc3B2RX12 1523 aa18.06■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Pdcd11Q6NS46 1862 aaKnown RBP18.06■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Mast1Q9R1L5 1570 aa18.05■□□□□ 0.48
Ube3a-216ENSMUST00000202945 DroshaQ5HZJ0 1373 aaKnown RBP18.05■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Plcd4Q8K3R3 807 aa18.04■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Rock1P70335 1354 aa18.04■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Rock2P70336 1388 aa18.03■□□□□ 0.48
Ube3a-216ENSMUST00000202945 ArxO35085 564 aa18.03■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Prdm10Q3UTQ7 1184 aa18.03■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Kidins220E9Q9B7 1793 aa18.03■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Usp54Q8BL06 1588 aaKnown RBP18.02■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Hsp90aa1P07901 733 aaKnown RBP18.02■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Ccdc27Q3V036 639 aa18.02■□□□□ 0.48
Ube3a-216ENSMUST00000202945 Kiaa1210E9Q0C6 1637 aa18.02■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Cpsf1Q9EPU4 1441 aaKnown RBP18.02■□□□□ 0.47
Ube3a-216ENSMUST00000202945 PnisrA2AJT4 805 aaKnown RBP18.01■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Hecw1Q8K4P8 1604 aa18■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Irx3P81067 507 aa18■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Upf2A2AT37 1269 aaKnown RBP18■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Nsd2Q8BVE8 1365 aa17.99■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Kif1bQ60575 1816 aaKnown RBP17.99■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Gtf3c3Q3TMP1 882 aa17.98■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Ofd1Q80Z25 1017 aa17.97■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Gm20521D3Z5F7 333 aa17.97■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Pank3Q8R2W9 370 aa17.97■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Iqgap1Q9JKF1 1657 aaKnown RBP17.97■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Anp32bQ9EST5 272 aaKnown RBP17.97■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Edc4Q3UJB9 1406 aaKnown RBP17.96■□□□□ 0.47
Ube3a-216ENSMUST00000202945 Inpp5dQ9ES52 1191 aa17.96■□□□□ 0.47
Ube3a-216ENSMUST00000202945 ShprhQ7TPQ3 1674 aa17.94■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Srcin1Q9QWI6 1250 aa17.94■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Zfyve16Q80U44 1528 aa17.94■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Rpgrip1lQ8CG73 1264 aa17.94■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Fan1Q69ZT1 1020 aa17.93■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Xrn1P97789 1719 aaKnown RBP17.93■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Neurl4Q5NCX5 1563 aa17.92■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Rad21Q61550 635 aaKnown RBP17.92■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Cep170Q6A065 1588 aa17.92■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Slc4a1apE9PX68 744 aa17.92■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Pknox2Q8BG99 474 aa17.92■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Ttc21bQ0HA38 1315 aa17.91■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Pak3Q61036 559 aa17.91■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Q7TT23 1179 aa17.91■□□□□ 0.46
Ube3a-216ENSMUST00000202945 Srpk2O54781 681 aaKnown RBP17.91■□□□□ 0.46
Ube3a-216ENSMUST00000202945 NeflP08551 543 aa17.9■□□□□ 0.46
Retrieved 100 of 22,080 RNA–protein pairs in 12.4 ms