RNA–Protein interactions for RNA: ENSMUST00000196220.4

Pdlim5-208, Transcript of PDZ and LIM domain protein 5, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pdlim5, Length 1,725 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-208ENSMUST00000196220 Plekhg5Q66T02 1073 aa18.54■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Kidins220E9Q9B7 1793 aa18.54■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Asxl1P59598 1514 aa18.54■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Spag9Q58A65 1321 aaKnown RBP18.53■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Mapk8ip2Q9ERE9 830 aa18.52■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 RalgapbQ8BQZ4 1484 aa18.52■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Iqgap1Q9JKF1 1657 aaKnown RBP18.52■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Rock2P70336 1388 aa18.52■□□□□ 0.56
Pdlim5-208ENSMUST00000196220 Zfyve16Q80U44 1528 aa18.51■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Abca17E9PX95 1733 aa18.5■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Atp7aQ64430 1491 aa18.5■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Gapvd1Q6PAR5 1458 aa18.5■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 PtprtQ99M80 1454 aa18.5■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Nsd2Q8BVE8 1365 aa18.49■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Znf608Q56A10 1511 aa18.48■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Gm13695A2AK44 830 aa18.48■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Rundc1Q0VDN7 615 aa18.46■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Card11Q8CIS0 1159 aa18.46■□□□□ 0.55
Pdlim5-208ENSMUST00000196220 Cep170Q6A065 1588 aa18.45■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Pde4cQ3UEI1 686 aa18.45■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Usp54Q8BL06 1588 aaKnown RBP18.44■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Kif1bQ60575 1816 aaKnown RBP18.44■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 ShprhQ7TPQ3 1674 aa18.43■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Nos1Q9Z0J4 1429 aa18.43■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Abca9Q8K449 1623 aa18.43■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Cdk13Q69ZA1 1511 aaKnown RBP18.42■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Tarbp1E9Q368 1579 aa18.42■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Washc2Q6PGL7 1334 aa18.41■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Znf710Q3U288 666 aa18.4■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Map3k5O35099 1380 aa18.4■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Ylpm1Q9R0I7 1386 aaKnown RBP18.4■□□□□ 0.54
Pdlim5-208ENSMUST00000196220 Edc4Q3UJB9 1406 aaKnown RBP18.39■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Pabpn1Q8CCS6 302 aaKnown RBP18.39■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Xrn1P97789 1719 aaKnown RBP18.39■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Lemd3Q9WU40 921 aa18.38■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Setd1aE9PYH6 1716 aa18.37■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Znf518aB2RRF6 1478 aaKnown RBP18.37■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Csrnp3P59055 597 aa18.36■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Pelp1Q9DBD5 1123 aaKnown RBP18.36■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Aplp2Q06335 707 aa18.35■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Grwd1Q810D6 446 aaKnown RBP18.35■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Plch2A2AP18 1501 aa18.35■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Adamts13Q769J6 1426 aa18.33■□□□□ 0.53
Pdlim5-208ENSMUST00000196220 Myo5cE9Q1F5 1742 aa18.32■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Uggt2E9Q4X2 1504 aa18.31■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Kdm5cP41230 1554 aa18.31■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Atp10aO54827 1508 aa18.3■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Topbp1Q6ZQF0 1515 aa18.3■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Zbtb7cQ8VCZ7 619 aa18.3■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 OvosQ3UU35 1456 aa18.3■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Hnrnpul2Q00PI9 745 aaKnown RBP18.29■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 AnkarA2RT91 1465 aa18.29■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Tmem131lQ3U3D7 1597 aa18.29■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Arid4bA2CG63 1314 aaKnown RBP18.28■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 PnisrA2AJT4 805 aaKnown RBP18.28■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Ifnlr1Q8CGK5 535 aa18.28■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Fndc1E9Q043 1732 aa18.27■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 AglF8VPN4 1532 aa18.27■□□□□ 0.52
Pdlim5-208ENSMUST00000196220 Arid3cA6PWV5 409 aa18.26■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Depdc5P61460 1591 aa18.26■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Tulp4Q9JIL5 1547 aa18.26■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Mrs2Q5NCE8 434 aa18.26■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Mroh3A0A1D5RM54 893 aa18.25■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Kif3bQ61771 747 aa18.25■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Abcc6Q9R1S7 1498 aa18.25■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 NrdcQ8BHG1 1161 aa18.23■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Ttc21bQ0HA38 1315 aa18.23■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Ifit1bl1D3Z6F0 470 aa18.23■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Exoc6Q8R313 802 aa18.23■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Cdc42bpgQ80UW5 1551 aa18.21■□□□□ 0.51
Pdlim5-208ENSMUST00000196220 Slc4a2P13808 1237 aaKnown RBP18.2■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Kiaa0556Q8C753 1610 aa18.2■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Zmym4A2A791 1549 aaKnown RBP18.2■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Iqgap3F8VQ29 1632 aa18.2■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Abca6Q8K441 1624 aa18.19■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Gm156Q58A37 223 aa18.19■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Tubgcp6G5E8P0 1769 aa18.19■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Wwc2Q6NXJ0 1187 aa18.18■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Sbno1Q689Z5 1390 aa18.18■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 1700123L14RikQ3V2K7 440 aa18.18■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 ErbinQ80TH2 1402 aa18.17■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Stard8Q8K031 1019 aa18.17■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Tecpr2Q3UH45 1423 aa18.17■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Cep152A2AUM9 1736 aaKnown RBP18.16■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Pola1P33609 1465 aa18.16■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Abca8aQ8K442 1620 aa18.16■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Clasp1Q80TV8 1535 aaKnown RBP18.16■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Akap12Q9WTQ5 1684 aa18.15■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Gli2Q0VGT2 1544 aa18.15■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Prex1Q69ZK0 1650 aa18.14■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Ak9G3UYQ4 1894 aa18.14■□□□□ 0.5
Pdlim5-208ENSMUST00000196220 Trpm1Q2TV84 1622 aa18.14■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Anp32bQ9EST5 272 aaKnown RBP18.14■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Rims1Q99NE5 1463 aa18.13■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Efcab6Q6P1E8 1516 aa18.13■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Adgrb3Q80ZF8 1522 aa18.12■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Myom2Q14BI5 1463 aa18.11■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Adgrl3Q80TS3 1537 aa18.1■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 RereQ80TZ9 1558 aa18.1■□□□□ 0.49
Pdlim5-208ENSMUST00000196220 Erich6D3Z6S9 713 aa18.09■□□□□ 0.49
Retrieved 100 of 22,080 RNA–protein pairs in 43.1 ms