RNA–Protein interactions for RNA: ENSMUST00000159337.7

Vcan-205, Transcript of Versican core protein, mousemouse

TSL 1 (best) BASIC

Gene Vcan, Length 2,273 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-205ENSMUST00000159337 Asxl1P59598 1514 aa19.47■□□□□ 0.71
Vcan-205ENSMUST00000159337 Zscan21Q07231 555 aa19.46■□□□□ 0.71
Vcan-205ENSMUST00000159337 Trak1Q6PD31 939 aa19.46■□□□□ 0.71
Vcan-205ENSMUST00000159337 Mak16Q8BGS0 296 aaKnown RBP19.46■□□□□ 0.71
Vcan-205ENSMUST00000159337 Polr3aB2RXC6 1390 aa19.46■□□□□ 0.71
Vcan-205ENSMUST00000159337 Ccdc141E9Q8Q6 1531 aa19.45■□□□□ 0.7
Vcan-205ENSMUST00000159337 ChgaP26339 463 aaKnown RBP19.44■□□□□ 0.7
Vcan-205ENSMUST00000159337 Kdm5cP41230 1554 aa19.44■□□□□ 0.7
Vcan-205ENSMUST00000159337 Dot1lQ6XZL8 1540 aa19.43■□□□□ 0.7
Vcan-205ENSMUST00000159337 Cc2d2bA0A286YDU8 1405 aa19.43■□□□□ 0.7
Vcan-205ENSMUST00000159337 Setd1bQ8CFT2 1985 aa19.43■□□□□ 0.7
Vcan-205ENSMUST00000159337 Anp32bQ9EST5 272 aaKnown RBP19.41■□□□□ 0.7
Vcan-205ENSMUST00000159337 Nup155Q99P88 1391 aaKnown RBP19.41■□□□□ 0.7
Vcan-205ENSMUST00000159337 Grwd1Q810D6 446 aaKnown RBP19.4■□□□□ 0.7
Vcan-205ENSMUST00000159337 Ttc41Q692V3 1318 aa19.39■□□□□ 0.7
Vcan-205ENSMUST00000159337 Mapkbp1Q6NS57 1503 aa19.39■□□□□ 0.69
Vcan-205ENSMUST00000159337 Ak9G3UYQ4 1894 aa19.39■□□□□ 0.69
Vcan-205ENSMUST00000159337 Rock1P70335 1354 aa19.38■□□□□ 0.69
Vcan-205ENSMUST00000159337 Ttll13A4Q9F6 804 aa19.38■□□□□ 0.69
Vcan-205ENSMUST00000159337 Plch2A2AP18 1501 aa19.38■□□□□ 0.69
Vcan-205ENSMUST00000159337 Nkx1-2P42580 305 aa19.37■□□□□ 0.69
Vcan-205ENSMUST00000159337 Tarbp1E9Q368 1579 aa19.36■□□□□ 0.69
Vcan-205ENSMUST00000159337 Mbd3Q9Z2D8 285 aaKnown RBP19.36■□□□□ 0.69
Vcan-205ENSMUST00000159337 Eif4g3Q80XI3 1579 aaKnown RBP19.35■□□□□ 0.69
Vcan-205ENSMUST00000159337 Shroom2A2ALU4 1481 aa19.35■□□□□ 0.69
Vcan-205ENSMUST00000159337 Mlh3A0A1Y7VMP7 1443 aa19.35■□□□□ 0.69
Vcan-205ENSMUST00000159337 Arhgap31A6X8Z5 1425 aa19.35■□□□□ 0.69
Vcan-205ENSMUST00000159337 Fmn2Q9JL04 1578 aa19.35■□□□□ 0.69
Vcan-205ENSMUST00000159337 Pbrm1Q8BSQ9 1634 aaKnown RBP19.34■□□□□ 0.69
Vcan-205ENSMUST00000159337 Q7TT23 1179 aa19.34■□□□□ 0.69
Vcan-205ENSMUST00000159337 Magi1Q6RHR9 1471 aa19.34■□□□□ 0.69
Vcan-205ENSMUST00000159337 PtprgQ05909 1442 aa19.33■□□□□ 0.69
Vcan-205ENSMUST00000159337 Abcc2Q8VI47 1543 aa19.33■□□□□ 0.68
Vcan-205ENSMUST00000159337 Caskin1Q6P9K8 1431 aa19.33■□□□□ 0.68
Vcan-205ENSMUST00000159337 Clasp1Q80TV8 1535 aaKnown RBP19.32■□□□□ 0.68
Vcan-205ENSMUST00000159337 Arid4bA2CG63 1314 aaKnown RBP19.32■□□□□ 0.68
Vcan-205ENSMUST00000159337 Tex14Q7M6U3 1450 aa19.31■□□□□ 0.68
Vcan-205ENSMUST00000159337 Zmym3Q9JLM4 1370 aa19.31■□□□□ 0.68
Vcan-205ENSMUST00000159337 Nup160Q9Z0W3 1402 aaKnown RBP19.31■□□□□ 0.68
Vcan-205ENSMUST00000159337 Kdm2bQ6P1G2 1309 aa19.31■□□□□ 0.68
Vcan-205ENSMUST00000159337 Mroh2aD3Z750 1679 aa19.3■□□□□ 0.68
Vcan-205ENSMUST00000159337 Map4P27546 1125 aaKnown RBP19.3■□□□□ 0.68
Vcan-205ENSMUST00000159337 Fam163aQ8CAA5 168 aa19.3■□□□□ 0.68
Vcan-205ENSMUST00000159337 Prex2Q3LAC4 1598 aa19.3■□□□□ 0.68
Vcan-205ENSMUST00000159337 Rrbp1Q99PL5 1605 aaKnown RBP19.29■□□□□ 0.68
Vcan-205ENSMUST00000159337 DaxxO35613 739 aa19.29■□□□□ 0.68
Vcan-205ENSMUST00000159337 Amer1Q7TS75 1132 aa19.29■□□□□ 0.68
Vcan-205ENSMUST00000159337 Plcd4Q8K3R3 807 aa19.28■□□□□ 0.68
Vcan-205ENSMUST00000159337 Mrc2Q64449 1479 aa19.28■□□□□ 0.68
Vcan-205ENSMUST00000159337 Tdrd9Q14BI7 1383 aa19.28■□□□□ 0.68
Vcan-205ENSMUST00000159337 4933416C03RikQ3V063 378 aa19.27■□□□□ 0.68
Vcan-205ENSMUST00000159337 Rad21Q61550 635 aaKnown RBP19.27■□□□□ 0.68
Vcan-205ENSMUST00000159337 CanxP35564 591 aaKnown RBP19.27■□□□□ 0.68
Vcan-205ENSMUST00000159337 Lrrc9Q8CDN9 1456 aa19.27■□□□□ 0.67
Vcan-205ENSMUST00000159337 Adgrl2Q8JZZ7 1487 aa19.26■□□□□ 0.67
Vcan-205ENSMUST00000159337 Fgd1P52734 960 aa19.25■□□□□ 0.67
Vcan-205ENSMUST00000159337 PrxO55103 1391 aa19.24■□□□□ 0.67
Vcan-205ENSMUST00000159337 Mre11Q61216 706 aa19.23■□□□□ 0.67
Vcan-205ENSMUST00000159337 Sart3Q9JLI8 962 aaKnown RBP19.23■□□□□ 0.67
Vcan-205ENSMUST00000159337 Kif16bB1AVY7 1312 aa19.23■□□□□ 0.67
Vcan-205ENSMUST00000159337 EspnQ9ET47 871 aa19.22■□□□□ 0.67
Vcan-205ENSMUST00000159337 Gm14025A2AP89 1413 aa19.22■□□□□ 0.67
Vcan-205ENSMUST00000159337 B4galnt3Q6L8S8 986 aa19.21■□□□□ 0.67
Vcan-205ENSMUST00000159337 Pank3Q8R2W9 370 aa19.21■□□□□ 0.67
Vcan-205ENSMUST00000159337 NudcO35685 332 aaKnown RBP19.2■□□□□ 0.66
Vcan-205ENSMUST00000159337 Dnai1Q8C0M8 701 aa19.2■□□□□ 0.66
Vcan-205ENSMUST00000159337 Ppip5k1A2ARP1 1436 aa19.19■□□□□ 0.66
Vcan-205ENSMUST00000159337 Plekhh1Q80TI1 1356 aa19.18■□□□□ 0.66
Vcan-205ENSMUST00000159337 Sbno1Q689Z5 1390 aa19.18■□□□□ 0.66
Vcan-205ENSMUST00000159337 Ssh2Q5SW75 1423 aa19.18■□□□□ 0.66
Vcan-205ENSMUST00000159337 Zcchc11B2RX14 1644 aaKnown RBP19.17■□□□□ 0.66
Vcan-205ENSMUST00000159337 Zscan10Q3URR7 782 aa19.17■□□□□ 0.66
Vcan-205ENSMUST00000159337 Pdlim2Q8R1G6 349 aa19.17■□□□□ 0.66
Vcan-205ENSMUST00000159337 Inpp5dQ9ES52 1191 aa19.17■□□□□ 0.66
Vcan-205ENSMUST00000159337 Atp7aQ64430 1491 aa19.16■□□□□ 0.66
Vcan-205ENSMUST00000159337 Ipo4Q8VI75 1082 aa19.16■□□□□ 0.66
Vcan-205ENSMUST00000159337 Esx1O88933 382 aa19.15■□□□□ 0.66
Vcan-205ENSMUST00000159337 Ppm1gQ61074 542 aa19.15■□□□□ 0.66
Vcan-205ENSMUST00000159337 Rwdd1Q9CQK7 243 aa19.15■□□□□ 0.66
Vcan-205ENSMUST00000159337 Adamts13Q769J6 1426 aa19.15■□□□□ 0.66
Vcan-205ENSMUST00000159337 Cd109Q8R422 1442 aa19.14■□□□□ 0.65
Vcan-205ENSMUST00000159337 Clstn2Q9ER65 966 aa19.14■□□□□ 0.65
Vcan-205ENSMUST00000159337 Mast1Q9R1L5 1570 aa19.14■□□□□ 0.65
Vcan-205ENSMUST00000159337 Smc5Q8CG46 1101 aaKnown RBP19.13■□□□□ 0.65
Vcan-205ENSMUST00000159337 Chmp5Q9D7S9 219 aa19.13■□□□□ 0.65
Vcan-205ENSMUST00000159337 Atf7ipQ7TT18 1306 aa19.13■□□□□ 0.65
Vcan-205ENSMUST00000159337 Fam208aQ69ZR9 1610 aaKnown RBP19.12■□□□□ 0.65
Vcan-205ENSMUST00000159337 CrbnQ8C7D2 445 aa19.12■□□□□ 0.65
Vcan-205ENSMUST00000159337 Trappc8E9PWG2 1437 aa19.12■□□□□ 0.65
Vcan-205ENSMUST00000159337 Tmf1B9EKI3 1091 aa19.11■□□□□ 0.65
Vcan-205ENSMUST00000159337 Gm16486A0A1D5RMD1 1434 aa19.11■□□□□ 0.65
Vcan-205ENSMUST00000159337 Mapk8ip3Q9ESN9 1337 aa19.1■□□□□ 0.65
Vcan-205ENSMUST00000159337 Neurl4Q5NCX5 1563 aa19.1■□□□□ 0.65
Vcan-205ENSMUST00000159337 Rab3gap2Q8BMG7 1366 aa19.09■□□□□ 0.65
Vcan-205ENSMUST00000159337 Zbtb4Q5F293 982 aa19.09■□□□□ 0.65
Vcan-205ENSMUST00000159337 Dbr1Q923B1 550 aa19.09■□□□□ 0.65
Vcan-205ENSMUST00000159337 Ppp2r1aQ76MZ3 589 aa19.08■□□□□ 0.65
Vcan-205ENSMUST00000159337 Gm32742A0A1B0GT42 1604 aa19.08■□□□□ 0.64
Vcan-205ENSMUST00000159337 Tmc1Q8R4P5 757 aa19.07■□□□□ 0.64
Vcan-205ENSMUST00000159337 Pola1P33609 1465 aa19.06■□□□□ 0.64
Retrieved 100 of 22,080 RNA–protein pairs in 12.1 ms