RNA–Protein interactions for RNA: ENSMUST00000107343.7

Chtop-205, Transcript of Chromatin target of PRMT1 protein, mousemouse

TSL 1 (best) BASIC

Gene Chtop, Length 3,118 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chtop-205ENSMUST00000107343 Pik3c2gO70167 1506 aa18.33■□□□□ 0.52
Chtop-205ENSMUST00000107343 Npm1Q61937 292 aaKnown RBP18.32■□□□□ 0.52
Chtop-205ENSMUST00000107343 Hsp90ab1P11499 724 aaKnown RBP18.31■□□□□ 0.52
Chtop-205ENSMUST00000107343 Mapk8ip3Q9ESN9 1337 aa18.31■□□□□ 0.52
Chtop-205ENSMUST00000107343 Il4rP16382 810 aa18.31■□□□□ 0.52
Chtop-205ENSMUST00000107343 Stard8Q8K031 1019 aa18.31■□□□□ 0.52
Chtop-205ENSMUST00000107343 Gm14025A2AP89 1413 aa18.3■□□□□ 0.52
Chtop-205ENSMUST00000107343 Zscan21Q07231 555 aa18.3■□□□□ 0.52
Chtop-205ENSMUST00000107343 Zmym4A2A791 1549 aaKnown RBP18.3■□□□□ 0.52
Chtop-205ENSMUST00000107343 Rfx7F8VPJ6 1459 aa18.3■□□□□ 0.52
Chtop-205ENSMUST00000107343 Urb2E9Q7L1 1524 aaKnown RBP18.29■□□□□ 0.52
Chtop-205ENSMUST00000107343 Rpgrip1lQ8CG73 1264 aa18.29■□□□□ 0.52
Chtop-205ENSMUST00000107343 Vgll3P85442 326 aa18.28■□□□□ 0.52
Chtop-205ENSMUST00000107343 Plppr3Q7TPB0 716 aa18.28■□□□□ 0.52
Chtop-205ENSMUST00000107343 Mcm4P49717 862 aa18.27■□□□□ 0.52
Chtop-205ENSMUST00000107343 Ddrgk1Q80WW9 315 aa18.27■□□□□ 0.52
Chtop-205ENSMUST00000107343 Lmtk2Q3TYD6 1471 aa18.27■□□□□ 0.52
Chtop-205ENSMUST00000107343 Dapk1Q80YE7 1442 aa18.26■□□□□ 0.51
Chtop-205ENSMUST00000107343 LrpprcQ6PB66 1392 aaKnown RBP18.26■□□□□ 0.51
Chtop-205ENSMUST00000107343 Spryd3E9Q9B3 442 aa18.26■□□□□ 0.51
Chtop-205ENSMUST00000107343 Pkd2O35245 966 aa18.26■□□□□ 0.51
Chtop-205ENSMUST00000107343 TimelessQ9R1X4 1197 aa18.26■□□□□ 0.51
Chtop-205ENSMUST00000107343 Ccdc183A2AJB1 534 aa18.25■□□□□ 0.51
Chtop-205ENSMUST00000107343 Gm6268A2A3U9 297 aa18.25■□□□□ 0.51
Chtop-205ENSMUST00000107343 Fam43aQ8BUP8 424 aa18.25■□□□□ 0.51
Chtop-205ENSMUST00000107343 Ripk4Q9ERK0 786 aa18.25■□□□□ 0.51
Chtop-205ENSMUST00000107343 Lekr1B2RVN1 116 aa18.24■□□□□ 0.51
Chtop-205ENSMUST00000107343 Isy1Q69ZQ2 285 aaKnown RBP18.24■□□□□ 0.51
Chtop-205ENSMUST00000107343 Lamc1P02468 1607 aaKnown RBP18.24■□□□□ 0.51
Chtop-205ENSMUST00000107343 Grin2bQ01097 1482 aa18.24■□□□□ 0.51
Chtop-205ENSMUST00000107343 Sptbn5F6UCX4 1208 aa18.23■□□□□ 0.51
Chtop-205ENSMUST00000107343 Chic2Q9D9G3 165 aa18.23■□□□□ 0.51
Chtop-205ENSMUST00000107343 Trim30dE9PWL0 497 aa18.23■□□□□ 0.51
Chtop-205ENSMUST00000107343 Dhx30Q99PU8 1217 aaKnown RBP18.23■□□□□ 0.51
Chtop-205ENSMUST00000107343 Clasp1Q80TV8 1535 aaKnown RBP18.22■□□□□ 0.51
Chtop-205ENSMUST00000107343 Mug2P28666 1451 aa18.2■□□□□ 0.5
Chtop-205ENSMUST00000107343 Mrc2Q64449 1479 aa18.2■□□□□ 0.5
Chtop-205ENSMUST00000107343 Carmil1Q6EDY6 1374 aa18.2■□□□□ 0.5
Chtop-205ENSMUST00000107343 Ccnb3Q810T2 1396 aa18.19■□□□□ 0.5
Chtop-205ENSMUST00000107343 Tubgcp6G5E8P0 1769 aa18.19■□□□□ 0.5
Chtop-205ENSMUST00000107343 Rwdd1Q9CQK7 243 aa18.18■□□□□ 0.5
Chtop-205ENSMUST00000107343 Rad21Q61550 635 aaKnown RBP18.16■□□□□ 0.5
Chtop-205ENSMUST00000107343 Dhx16G3X8X0 1044 aaKnown RBP18.16■□□□□ 0.5
Chtop-205ENSMUST00000107343 Rundc1Q0VDN7 615 aa18.16■□□□□ 0.5
Chtop-205ENSMUST00000107343 IbspQ61711 324 aa18.16■□□□□ 0.5
Chtop-205ENSMUST00000107343 Gse1Q3U3C9 1213 aa18.16■□□□□ 0.5
Chtop-205ENSMUST00000107343 Gcc2Q8CHG3 1679 aa18.15■□□□□ 0.5
Chtop-205ENSMUST00000107343 CadpsQ80TJ1 1355 aa18.15■□□□□ 0.5
Chtop-205ENSMUST00000107343 Pdia4P08003 638 aaKnown RBP18.15■□□□□ 0.5
Chtop-205ENSMUST00000107343 Dcaf11Q91VU6 549 aa18.15■□□□□ 0.5
Chtop-205ENSMUST00000107343 Ift140E9PY46 1464 aa18.15■□□□□ 0.5
Chtop-205ENSMUST00000107343 Trim44Q9QXA7 346 aa18.14■□□□□ 0.49
Chtop-205ENSMUST00000107343 Erbb4Q61527 1308 aa18.14■□□□□ 0.49
Chtop-205ENSMUST00000107343 Kif14L0N7N1 1674 aaKnown RBP18.13■□□□□ 0.49
Chtop-205ENSMUST00000107343 Plekhh1Q80TI1 1356 aa18.13■□□□□ 0.49
Chtop-205ENSMUST00000107343 Ssh1Q76I79 1042 aa18.13■□□□□ 0.49
Chtop-205ENSMUST00000107343 Aebp1Q640N1 1128 aa18.13■□□□□ 0.49
Chtop-205ENSMUST00000107343 Q7TT23 1179 aa18.13■□□□□ 0.49
Chtop-205ENSMUST00000107343 Arid4bA2CG63 1314 aaKnown RBP18.13■□□□□ 0.49
Chtop-205ENSMUST00000107343 Kif16bB1AVY7 1312 aa18.12■□□□□ 0.49
Chtop-205ENSMUST00000107343 Gapvd1Q6PAR5 1458 aa18.12■□□□□ 0.49
Chtop-205ENSMUST00000107343 Tnnt2P50752 301 aa18.12■□□□□ 0.49
Chtop-205ENSMUST00000107343 RalgapbQ8BQZ4 1484 aa18.11■□□□□ 0.49
Chtop-205ENSMUST00000107343 Map3k4O08648 1597 aa18.11■□□□□ 0.49
Chtop-205ENSMUST00000107343 4930567H17RikQ3V0K5 233 aa18.11■□□□□ 0.49
Chtop-205ENSMUST00000107343 Tnpo1Q8BFY9 898 aaKnown RBP18.1■□□□□ 0.49
Chtop-205ENSMUST00000107343 Card11Q8CIS0 1159 aa18.1■□□□□ 0.49
Chtop-205ENSMUST00000107343 Pdcl2Q78Y63 240 aa18.1■□□□□ 0.49
Chtop-205ENSMUST00000107343 Rabep1O35551 862 aa18.09■□□□□ 0.49
Chtop-205ENSMUST00000107343 Kif27Q7M6Z4 1394 aa18.09■□□□□ 0.49
Chtop-205ENSMUST00000107343 SphkapQ6NSW3 1687 aa18.08■□□□□ 0.49
Chtop-205ENSMUST00000107343 VgfQ0VGU4 617 aa18.08■□□□□ 0.49
Chtop-205ENSMUST00000107343 Trim26Q99PN3 545 aa18.07■□□□□ 0.48
Chtop-205ENSMUST00000107343 Dnajc14Q921R4 703 aa18.07■□□□□ 0.48
Chtop-205ENSMUST00000107343 Mknk2Q8CDB0 459 aa18.06■□□□□ 0.48
Chtop-205ENSMUST00000107343 Plch2A2AP18 1501 aa18.06■□□□□ 0.48
Chtop-205ENSMUST00000107343 Tbc1d32Q3URV1 1296 aa18.06■□□□□ 0.48
Chtop-205ENSMUST00000107343 Kif21aQ9QXL2 1672 aa18.05■□□□□ 0.48
Chtop-205ENSMUST00000107343 Tex14Q7M6U3 1450 aa18.05■□□□□ 0.48
Chtop-205ENSMUST00000107343 Zfp644E9QA22 1323 aa18.04■□□□□ 0.48
Chtop-205ENSMUST00000107343 Ythdc1E9Q5K9 736 aaKnown RBP18.03■□□□□ 0.48
Chtop-205ENSMUST00000107343 Cdk13Q69ZA1 1511 aaKnown RBP18.03■□□□□ 0.48
Chtop-205ENSMUST00000107343 Soga1E1U8D0 1418 aa18.03■□□□□ 0.48
Chtop-205ENSMUST00000107343 Gys2Q8VCB3 704 aa18.03■□□□□ 0.48
Chtop-205ENSMUST00000107343 Rock1P70335 1354 aa18.02■□□□□ 0.48
Chtop-205ENSMUST00000107343 Catsper2A2ARP9 588 aa18.02■□□□□ 0.48
Chtop-205ENSMUST00000107343 Setd1aE9PYH6 1716 aa18.02■□□□□ 0.48
Chtop-205ENSMUST00000107343 SlkO54988 1233 aa18.02■□□□□ 0.47
Chtop-205ENSMUST00000107343 ArxO35085 564 aa18.01■□□□□ 0.47
Chtop-205ENSMUST00000107343 Ddit3P35639 168 aa18.01■□□□□ 0.47
Chtop-205ENSMUST00000107343 Kdm5cP41230 1554 aa18■□□□□ 0.47
Chtop-205ENSMUST00000107343 Cpsf1Q9EPU4 1441 aaKnown RBP18■□□□□ 0.47
Chtop-205ENSMUST00000107343 DroshaQ5HZJ0 1373 aaKnown RBP17.99■□□□□ 0.47
Chtop-205ENSMUST00000107343 Znf521Q6KAS7 1311 aa17.99■□□□□ 0.47
Chtop-205ENSMUST00000107343 Terf2O35144 541 aa17.98■□□□□ 0.47
Chtop-205ENSMUST00000107343 PogzQ8BZH4 1409 aaKnown RBP17.98■□□□□ 0.47
Chtop-205ENSMUST00000107343 Ppp2r3aB2RXC8 1150 aa17.98■□□□□ 0.47
Chtop-205ENSMUST00000107343 Polr1aO35134 1717 aaKnown RBP17.97■□□□□ 0.47
Chtop-205ENSMUST00000107343 Fbxo2Q80UW2 297 aa17.97■□□□□ 0.47
Chtop-205ENSMUST00000107343 Ush1cQ9ES64 910 aa17.97■□□□□ 0.47
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms