RNA–Protein interactions for RNA: ENSMUST00000105409.7

Col18a1-203, Transcript of Collagen alpha-1(XVIII) chain, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Col18a1, Length 4,791 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1-203ENSMUST00000105409 Ccdc27Q3V036 639 aa15.18■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Kif21aQ9QXL2 1672 aa15.18■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Pde4cQ3UEI1 686 aa15.18■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Ttll5Q8CHB8 1328 aa15.18■□□□□ 0.02
Col18a1-203ENSMUST00000105409 SafbD3YXK2 937 aaKnown RBP15.18■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Dbr1Q923B1 550 aa15.17■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Mlh3A0A1Y7VMP7 1443 aa15.16■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Mak16Q8BGS0 296 aaKnown RBP15.15■□□□□ 0.02
Col18a1-203ENSMUST00000105409 3425401B19RikD3Z1D3 1412 aa15.15■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Tcerg1Q8CGF7 1100 aaKnown RBP15.15■□□□□ 0.02
Col18a1-203ENSMUST00000105409 Caskin1Q6P9K8 1431 aa15.14■□□□□ 0.01
Col18a1-203ENSMUST00000105409 1700019A02RikA0A087WPV9 146 aa15.14■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Speer4f1Q9D5Q6 258 aa15.14■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Cd109Q8R422 1442 aa15.14■□□□□ 0.01
Col18a1-203ENSMUST00000105409 WizO88286 1684 aaKnown RBP15.14■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Plcb2A3KGF7 1181 aa15.13■□□□□ 0.01
Col18a1-203ENSMUST00000105409 B4galnt3Q6L8S8 986 aa15.13■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Igf1rQ60751 1373 aa15.12■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Fan1Q69ZT1 1020 aa15.12■□□□□ 0.01
Col18a1-203ENSMUST00000105409 PxdnQ3UQ28 1475 aa15.12■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Peg3Q3URU2 1571 aa15.11■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Armcx1Q9CX83 456 aa15.11■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Map3k5O35099 1380 aa15.11■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Slc4a1apE9PX68 744 aa15.11■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Ncoa3O09000 1398 aa15.11■□□□□ 0.01
Col18a1-203ENSMUST00000105409 ErbinQ80TH2 1402 aa15.1■□□□□ 0.01
Col18a1-203ENSMUST00000105409 KnstrnQ9D9Z1 312 aaKnown RBP15.1■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Myom3A2ABU4 1439 aa15.1■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Stk26Q99JT2 416 aa15.1■□□□□ 0.01
Col18a1-203ENSMUST00000105409 BC005561E9Q5E2 1589 aa15.1■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Dhx9O70133 1380 aaKnown RBP15.1■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Chmp5Q9D7S9 219 aa15.09■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Pank3Q8R2W9 370 aa15.09■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Magi3Q9EQJ9 1476 aa15.09■□□□□ 0.01
Col18a1-203ENSMUST00000105409 PtmaP26350 111 aa15.09■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Dcaf11Q91VU6 549 aa15.08■□□□□ 0.01
Col18a1-203ENSMUST00000105409 Slc4a3P16283 1227 aa15.08■□□□□ 0
Col18a1-203ENSMUST00000105409 Supt16hQ920B9 1047 aa15.08■□□□□ 0
Col18a1-203ENSMUST00000105409 Rapgef6Q5NCJ1 1609 aa15.07■□□□□ 0
Col18a1-203ENSMUST00000105409 HnrnpuQ8VEK3 800 aaKnown RBP15.07■□□□□ 0
Col18a1-203ENSMUST00000105409 U2af1Q9D883 239 aaKnown RBP15.07■□□□□ 0
Col18a1-203ENSMUST00000105409 Nup160Q9Z0W3 1402 aaKnown RBP15.07■□□□□ 0
Col18a1-203ENSMUST00000105409 Shroom2A2ALU4 1481 aa15.06■□□□□ 0
Col18a1-203ENSMUST00000105409 Golga2Q921M4 999 aa15.06■□□□□ 0
Col18a1-203ENSMUST00000105409 Unc13aQ4KUS2 1712 aa15.05■□□□□ 0
Col18a1-203ENSMUST00000105409 MlecQ6ZQI3 291 aaKnown RBP15.05■□□□□ -0
Col18a1-203ENSMUST00000105409 CenpjQ569L8 1344 aa15.05■□□□□ -0
Col18a1-203ENSMUST00000105409 Usp40Q8BWR4 1235 aa15.05■□□□□ -0
Col18a1-203ENSMUST00000105409 Fancd2Q80V62 1450 aa15.04■□□□□ -0
Col18a1-203ENSMUST00000105409 Rtf1A2AQ19 715 aaKnown RBP15.04■□□□□ -0
Col18a1-203ENSMUST00000105409 CatipB9EKE5 520 aa15.04■□□□□ -0
Col18a1-203ENSMUST00000105409 Inpp5dQ9ES52 1191 aa15.03■□□□□ -0
Col18a1-203ENSMUST00000105409 Fam184bQ0KK56 942 aa15.03■□□□□ -0
Col18a1-203ENSMUST00000105409 Hsp90b1P08113 802 aaKnown RBP15.03■□□□□ -0
Col18a1-203ENSMUST00000105409 Lmo7E9PYF4 1699 aaKnown RBP15.01□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Psme1P97371 249 aa15.01□□□□□ -0.01
Col18a1-203ENSMUST00000105409 EspnQ9ET47 871 aa15.01□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Lmtk2Q3TYD6 1471 aa15□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Pbrm1Q8BSQ9 1634 aaKnown RBP15□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Zscan10Q3URR7 782 aa15□□□□□ -0.01
Col18a1-203ENSMUST00000105409 U2surpQ6NV83 1029 aaKnown RBP15□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Txndc2Q6P902 515 aa15□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Plekhg5Q66T02 1073 aa15□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Naip5Q9R016 1403 aa14.99□□□□□ -0.01
Col18a1-203ENSMUST00000105409 DroshaQ5HZJ0 1373 aaKnown RBP14.99□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Rprd2Q6NXI6 1469 aaKnown RBP14.99□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Rtn4Q99P72 1162 aaKnown RBP14.98□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Birc3O08863 600 aa14.98□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Pes1Q9EQ61 584 aaKnown RBP14.98□□□□□ -0.01
Col18a1-203ENSMUST00000105409 MccE9PWI3 1003 aa14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Sart3Q9JLI8 962 aaKnown RBP14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Abca5Q8K448 1642 aa14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Atp10dQ8K2X1 1416 aa14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Ythdc1E9Q5K9 736 aaKnown RBP14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Tmco5bQ80X59 307 aa14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Znf326O88291 580 aa14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Utp14aQ640M1 767 aaKnown RBP14.97□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Rock1P70335 1354 aa14.96□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Casc1Q6TDU8 730 aa14.96□□□□□ -0.01
Col18a1-203ENSMUST00000105409 Dnai1Q8C0M8 701 aa14.95□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Plin1Q8CGN5 517 aa14.95□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Lmod3E9QA62 571 aa14.94□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Pik3c2gO70167 1506 aa14.94□□□□□ -0.02
Col18a1-203ENSMUST00000105409 CrbnQ8C7D2 445 aa14.93□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Shq1Q7TMX5 569 aa14.93□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Puf60Q3UEB3 564 aaKnown RBP14.92□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Camsap2Q8C1B1 1461 aa14.92□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Adamts12Q811B3 1600 aa14.92□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Kif7B7ZNG0 1348 aa14.92□□□□□ -0.02
Col18a1-203ENSMUST00000105409 PnisrA2AJT4 805 aaKnown RBP14.91□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Q3TQI7 289 aaKnown RBP14.91□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Pde3bQ61409 1100 aa14.91□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Prex2Q3LAC4 1598 aa14.91□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Znf710Q3U288 666 aa14.9□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Ccar1Q8CH18 1146 aaKnown RBP14.9□□□□□ -0.02
Col18a1-203ENSMUST00000105409 PnnO35691 725 aaKnown RBP14.9□□□□□ -0.02
Col18a1-203ENSMUST00000105409 PtmsQ9D0J8 101 aaKnown RBP14.9□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Asxl1P59598 1514 aa14.9□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Ksr2Q3UVC0 959 aa14.9□□□□□ -0.02
Col18a1-203ENSMUST00000105409 Cluap1Q8R3P7 413 aa14.89□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 29.8 ms