RNA–Protein interactions for RNA: ENSMUST00000096198.9

Scn8a-202, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 1 (best) BASIC

Gene Scn8a, Length 1,072 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-202ENSMUST00000096198 Adgrl1Q80TR1 1466 aa13.94□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Gm13697A2AK42 830 aa13.94□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Gimap5Q8BWF2 308 aa13.94□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Lrp6O88572 1613 aa13.93□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Tiam1Q60610 1591 aa13.93□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Trpm1Q2TV84 1622 aa13.93□□□□□ -0.18
Scn8a-202ENSMUST00000096198 PtprvP70289 1705 aa13.93□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Trappc8E9PWG2 1437 aa13.91□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Ncoa3O09000 1398 aa13.91□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Pcf11G3X9Z4 1553 aa13.91□□□□□ -0.18
Scn8a-202ENSMUST00000096198 3425401B19RikD3Z1D3 1412 aa13.9□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Qtrt2B8ZXI1 415 aa13.9□□□□□ -0.18
Scn8a-202ENSMUST00000096198 Nrxn3Q6P9K9 1571 aa13.89□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Fyco1Q8VDC1 1437 aa13.89□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Cfap74Q3UY96 1578 aa13.88□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Arhgap35Q91YM2 1499 aa13.88□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Med14A2ABV5 1459 aaKnown RBP13.87□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Kif27Q7M6Z4 1394 aa13.86□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Brinp3Q499E0 766 aa13.86□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Arid4bA2CG63 1314 aaKnown RBP13.86□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Nwd1A6H603 1563 aa13.84□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Ttll13A4Q9F6 804 aa13.84□□□□□ -0.19
Scn8a-202ENSMUST00000096198 Cdc42bpgQ80UW5 1551 aa13.82□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Fam163aQ8CAA5 168 aa13.8□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Naip6Q9JIB6 1403 aa13.8□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Mbd5B1AYB6 1498 aa13.8□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Siglec1Q62230 1695 aa13.79□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Map3k5O35099 1380 aa13.79□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Gli2Q0VGT2 1544 aa13.79□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Aebp1Q640N1 1128 aa13.78□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Cdc42bpaQ3UU96 1719 aa13.78□□□□□ -0.2
Scn8a-202ENSMUST00000096198 Kcna4Q61423 654 aa13.77□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Ggt6Q6PDE7 497 aa13.76□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Peg3Q3URU2 1571 aa13.75□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Clip1Q922J3 1391 aa13.74□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Lmo7E9PYF4 1699 aaKnown RBP13.74□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Znf518aB2RRF6 1478 aaKnown RBP13.74□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Cdc42bpbQ7TT50 1713 aa13.73□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Yy1Q00899 414 aa13.73□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Mug1P28665 1476 aa13.73□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Robo2Q7TPD3 1470 aa13.73□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Abcc6Q9R1S7 1498 aa13.73□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Col22a1E9Q7P1 1613 aa13.72□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Zdbf2Q5SS00 2493 aaKnown RBP13.72□□□□□ -0.21
Scn8a-202ENSMUST00000096198 VirmaA2AIV2 1811 aaKnown RBP13.71□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Abcc3B2RX12 1523 aa13.71□□□□□ -0.21
Scn8a-202ENSMUST00000096198 Kiaa1551Q5DTW7 1521 aa13.7□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Gm32742A0A1B0GT42 1604 aa13.7□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Asxl1P59598 1514 aa13.69□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Znf526Q8BI66 675 aa13.69□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Sart1Q9Z315 806 aaKnown RBP13.69□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Bcl2l12Q9D3J3 255 aa13.68□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Kcna3P16390 528 aa13.67□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Tdrd9Q14BI7 1383 aa13.67□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Chd2E9PZM4 1827 aaKnown RBP13.67□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Col18a1P39061 1774 aa13.66□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Ccdc6D3YZP9 469 aa13.66□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Evi5lH3BKQ3 813 aa13.65□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Socs7Q8VHQ2 579 aa13.65□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Fhod3Q76LL6 1578 aa13.65□□□□□ -0.22
Scn8a-202ENSMUST00000096198 Naip5Q9R016 1403 aa13.64□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Pdcd11Q6NS46 1862 aaKnown RBP13.63□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Hoxd11P23813 323 aa13.62□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Dhx57Q6P5D3 1388 aaKnown RBP13.61□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Thsd7aQ69ZU6 1645 aa13.61□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Ylpm1Q9R0I7 1386 aaKnown RBP13.6□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Eno4Q8C042 619 aa13.6□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Nos1Q9Z0J4 1429 aa13.6□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Zfp142G5E869 1843 aa13.6□□□□□ -0.23
Scn8a-202ENSMUST00000096198 ShprhQ7TPQ3 1674 aa13.59□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Myt1lP97500 1187 aa13.59□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Kdm5aQ3UXZ9 1690 aa13.59□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Xrn1P97789 1719 aaKnown RBP13.59□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Ccnb3Q810T2 1396 aa13.58□□□□□ -0.23
Scn8a-202ENSMUST00000096198 Marf1Q8BJ34 1730 aaKnown RBP13.58□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Setd1aE9PYH6 1716 aa13.57□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Ap3b1Q9Z1T1 1105 aa13.57□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Kif3bQ61771 747 aa13.56□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Tmem131lQ3U3D7 1597 aa13.56□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Tecpr2Q3UH45 1423 aa13.55□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Eif2ak4Q9QZ05 1648 aa13.54□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Ybx3Q9JKB3 361 aaKnown RBP13.53□□□□□ -0.24
Scn8a-202ENSMUST00000096198 Slain2Q8CI08 581 aa13.52□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Abcc10Q8R4P9 1501 aa13.52□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Mast1Q9R1L5 1570 aa13.52□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Arap3Q8R5G7 1538 aa13.51□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Hfm1D3Z4R1 1434 aa13.5□□□□□ -0.25
Scn8a-202ENSMUST00000096198 OscarQ8VBT3 265 aa13.5□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Cep162Q6ZQ06 1403 aa13.49□□□□□ -0.25
Scn8a-202ENSMUST00000096198 C3P01027 1663 aa13.48□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Smim5Q8BT42 78 aa13.48□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Adcy10Q8C0T9 1614 aa13.48□□□□□ -0.25
Scn8a-202ENSMUST00000096198 IghaA0A0A6YXW6 389 aa13.47□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Uggt2E9Q4X2 1504 aa13.46□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Txndc2Q6P902 515 aa13.46□□□□□ -0.25
Scn8a-202ENSMUST00000096198 Rprd2Q6NXI6 1469 aaKnown RBP13.45□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Ubap1lG3UW59 384 aa13.45□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Sugp2Q8CH09 1067 aa13.45□□□□□ -0.26
Scn8a-202ENSMUST00000096198 Lmod2Q3UHZ5 550 aa13.44□□□□□ -0.26
Scn8a-202ENSMUST00000096198 PsdQ5DTT2 1024 aa13.44□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms