RNA–Protein interactions for RNA: ENSMUST00000090040.11

Ldb3-205, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 4,981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-205ENSMUST00000090040 Tmf1B9EKI3 1091 aa13.91□□□□□ -0.18
Ldb3-205ENSMUST00000090040 DroshaQ5HZJ0 1373 aaKnown RBP13.91□□□□□ -0.18
Ldb3-205ENSMUST00000090040 Gm156Q58A37 223 aa13.9□□□□□ -0.18
Ldb3-205ENSMUST00000090040 OvosQ3UU35 1456 aa13.89□□□□□ -0.19
Ldb3-205ENSMUST00000090040 AI481877A2ALV5 1481 aa13.89□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Trappc8E9PWG2 1437 aa13.88□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Fan1Q69ZT1 1020 aa13.87□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Kdm3bQ6ZPY7 1562 aa13.87□□□□□ -0.19
Ldb3-205ENSMUST00000090040 MyclP10166 368 aa13.87□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Wwc2Q6NXJ0 1187 aa13.86□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Rprd2Q6NXI6 1469 aaKnown RBP13.86□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Kiaa1551Q5DTW7 1521 aa13.85□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Kdm5bQ80Y84 1544 aa13.85□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Adgrl2Q8JZZ7 1487 aa13.85□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Pik3c2gO70167 1506 aa13.84□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Smg6P61406 1418 aaKnown RBP13.84□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Dnmt1P13864 1620 aaKnown RBP13.84□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Naip5Q9R016 1403 aa13.83□□□□□ -0.19
Ldb3-205ENSMUST00000090040 Exoc6Q8R313 802 aa13.83□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Rad21Q61550 635 aaKnown RBP13.83□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Psme1P97371 249 aa13.83□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Ofd1Q80Z25 1017 aa13.83□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Stk26Q99JT2 416 aa13.83□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Txndc2Q6P902 515 aa13.82□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Adgrb2Q8CGM1 1561 aa13.81□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Usp40Q8BWR4 1235 aa13.81□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Calr4Q3TQS0 420 aa13.8□□□□□ -0.2
Ldb3-205ENSMUST00000090040 CenpjQ569L8 1344 aa13.8□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Cnga1P29974 684 aa13.8□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Ttc21bQ0HA38 1315 aa13.79□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Ylpm1Q9R0I7 1386 aaKnown RBP13.79□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Camsap2Q8C1B1 1461 aa13.78□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Ssh2Q5SW75 1423 aa13.78□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Rock1P70335 1354 aa13.78□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Slc4a1apE9PX68 744 aa13.78□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Fmn2Q9JL04 1578 aa13.77□□□□□ -0.2
Ldb3-205ENSMUST00000090040 Zscan21Q07231 555 aa13.75□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Pank3Q8R2W9 370 aa13.75□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Polr3aB2RXC6 1390 aa13.75□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Asxl1P59598 1514 aa13.75□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Shq1Q7TMX5 569 aa13.75□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Utp14aQ640M1 767 aaKnown RBP13.74□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Lrrc9Q8CDN9 1456 aa13.74□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Polr3glQ8R0C0 218 aa13.74□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Anp32aO35381 247 aa13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Csrnp3P59055 597 aa13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Puf60Q3UEB3 564 aaKnown RBP13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Dcaf11Q91VU6 549 aa13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Fam184bQ0KK56 942 aa13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Plekhg5Q66T02 1073 aa13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Atp7aQ64430 1491 aa13.73□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Mroh2aD3Z750 1679 aa13.72□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Washc2Q6PGL7 1334 aa13.72□□□□□ -0.21
Ldb3-205ENSMUST00000090040 Afap1Q80YS6 731 aa13.72□□□□□ -0.21
Ldb3-205ENSMUST00000090040 SphkapQ6NSW3 1687 aa13.7□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Inpp5dQ9ES52 1191 aa13.7□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Fam208aQ69ZR9 1610 aaKnown RBP13.7□□□□□ -0.22
Ldb3-205ENSMUST00000090040 PtprgQ05909 1442 aa13.7□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Zfp777B9EKF4 885 aa13.69□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Cdc42bpaQ3UU96 1719 aa13.69□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Adgrl3Q80TS3 1537 aa13.69□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Zscan10Q3URR7 782 aa13.69□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Aplp2Q06335 707 aa13.68□□□□□ -0.22
Ldb3-205ENSMUST00000090040 MlecQ6ZQI3 291 aaKnown RBP13.68□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Mak16Q8BGS0 296 aaKnown RBP13.68□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Mapk8ip3Q9ESN9 1337 aa13.67□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Kdm6bQ5NCY0 1641 aa13.66□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Slc52a2Q9D8F3 450 aa13.66□□□□□ -0.22
Ldb3-205ENSMUST00000090040 AlkP97793 1621 aa13.66□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Cep170Q6A065 1588 aa13.66□□□□□ -0.22
Ldb3-205ENSMUST00000090040 NgefQ8CHT1 710 aa13.65□□□□□ -0.22
Ldb3-205ENSMUST00000090040 Rnf17Q99MV7 1640 aa13.64□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Ncoa1P70365 1447 aa13.64□□□□□ -0.23
Ldb3-205ENSMUST00000090040 PtprtQ99M80 1454 aa13.64□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Fhod3Q76LL6 1578 aa13.63□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Supt6hQ62383 1726 aaKnown RBP13.62□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Znf608Q56A10 1511 aa13.62□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Sall3Q62255 1320 aa13.62□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Mink1Q9JM52 1308 aa13.62□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Q9D9H8 365 aa13.61□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Kif7B7ZNG0 1348 aa13.61□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Mast1Q9R1L5 1570 aa13.61□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Kiaa1210E9Q0C6 1637 aa13.61□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Znf518aB2RRF6 1478 aaKnown RBP13.6□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Iqcf3Q9D498 203 aa13.6□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Neurod2Q62414 383 aa13.6□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Setd1bQ8CFT2 1985 aa13.6□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Wdr43Q6ZQL4 677 aaKnown RBP13.6□□□□□ -0.23
Ldb3-205ENSMUST00000090040 NhsB1AV60 1647 aa13.6□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Gli2Q0VGT2 1544 aa13.59□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Cpsf1Q9EPU4 1441 aaKnown RBP13.59□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Golga2Q921M4 999 aa13.59□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Gsto1O09131 240 aa13.59□□□□□ -0.23
Ldb3-205ENSMUST00000090040 Ppp4r2Q0VGB7 417 aa13.57□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Ppip5k1A2ARP1 1436 aa13.57□□□□□ -0.24
Ldb3-205ENSMUST00000090040 FanciQ8K368 1330 aa13.57□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Lamc1P02468 1607 aaKnown RBP13.57□□□□□ -0.24
Ldb3-205ENSMUST00000090040 U2af1Q9D883 239 aaKnown RBP13.57□□□□□ -0.24
Ldb3-205ENSMUST00000090040 Atp2b2Q9R0K7 1198 aa13.56□□□□□ -0.24
Ldb3-205ENSMUST00000090040 RalgapbQ8BQZ4 1484 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 10.6 ms