RNA–Protein interactions for RNA: ENSMUST00000047697.11

Trim17-201, Transcript of E3 ubiquitin-protein ligase TRIM17, mousemouse

TSL 2 BASIC

Gene Trim17, Length 3,664 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim17-201ENSMUST00000047697 Myom3A2ABU4 1439 aa13.47□□□□□ -0.25
Trim17-201ENSMUST00000047697 Mug2P28666 1451 aa13.47□□□□□ -0.25
Trim17-201ENSMUST00000047697 Slc4a1apE9PX68 744 aa13.47□□□□□ -0.25
Trim17-201ENSMUST00000047697 Ppm1gQ61074 542 aa13.46□□□□□ -0.25
Trim17-201ENSMUST00000047697 Adgrb2Q8CGM1 1561 aa13.46□□□□□ -0.25
Trim17-201ENSMUST00000047697 Kank1E9Q238 1360 aa13.46□□□□□ -0.25
Trim17-201ENSMUST00000047697 Rock1P70335 1354 aa13.46□□□□□ -0.25
Trim17-201ENSMUST00000047697 Grin2aP35436 1464 aa13.46□□□□□ -0.25
Trim17-201ENSMUST00000047697 Tmf1B9EKI3 1091 aa13.46□□□□□ -0.26
Trim17-201ENSMUST00000047697 Mbd3Q9Z2D8 285 aaKnown RBP13.45□□□□□ -0.26
Trim17-201ENSMUST00000047697 Armcx1Q9CX83 456 aa13.45□□□□□ -0.26
Trim17-201ENSMUST00000047697 Soga1E1U8D0 1418 aa13.45□□□□□ -0.26
Trim17-201ENSMUST00000047697 Trim26Q99PN3 545 aa13.45□□□□□ -0.26
Trim17-201ENSMUST00000047697 Rangap1P46061 589 aaKnown RBP13.44□□□□□ -0.26
Trim17-201ENSMUST00000047697 Fhod3Q76LL6 1578 aa13.44□□□□□ -0.26
Trim17-201ENSMUST00000047697 Zscan10Q3URR7 782 aa13.44□□□□□ -0.26
Trim17-201ENSMUST00000047697 Arhgap31A6X8Z5 1425 aa13.44□□□□□ -0.26
Trim17-201ENSMUST00000047697 Gcc2Q8CHG3 1679 aa13.43□□□□□ -0.26
Trim17-201ENSMUST00000047697 WizO88286 1684 aaKnown RBP13.43□□□□□ -0.26
Trim17-201ENSMUST00000047697 NudcO35685 332 aaKnown RBP13.43□□□□□ -0.26
Trim17-201ENSMUST00000047697 Plb1Q3TTY0 1478 aa13.42□□□□□ -0.26
Trim17-201ENSMUST00000047697 PxdnQ3UQ28 1475 aa13.42□□□□□ -0.26
Trim17-201ENSMUST00000047697 Naip6Q9JIB6 1403 aa13.42□□□□□ -0.26
Trim17-201ENSMUST00000047697 Cdk13Q69ZA1 1511 aaKnown RBP13.41□□□□□ -0.26
Trim17-201ENSMUST00000047697 Kif16bB1AVY7 1312 aa13.41□□□□□ -0.26
Trim17-201ENSMUST00000047697 Spryd3E9Q9B3 442 aa13.41□□□□□ -0.26
Trim17-201ENSMUST00000047697 Wdr7Q920I9 1489 aa13.4□□□□□ -0.26
Trim17-201ENSMUST00000047697 Srcin1Q9QWI6 1250 aa13.4□□□□□ -0.26
Trim17-201ENSMUST00000047697 Eif2s2Q99L45 331 aaKnown RBP13.4□□□□□ -0.27
Trim17-201ENSMUST00000047697 Dnajc5bQ9CQ94 199 aa13.4□□□□□ -0.27
Trim17-201ENSMUST00000047697 PrxO55103 1391 aa13.39□□□□□ -0.27
Trim17-201ENSMUST00000047697 Kdm3bQ6ZPY7 1562 aa13.39□□□□□ -0.27
Trim17-201ENSMUST00000047697 Sart1Q9Z315 806 aaKnown RBP13.38□□□□□ -0.27
Trim17-201ENSMUST00000047697 Abca5Q8K448 1642 aa13.38□□□□□ -0.27
Trim17-201ENSMUST00000047697 Cnga1P29974 684 aa13.38□□□□□ -0.27
Trim17-201ENSMUST00000047697 Magi3Q9EQJ9 1476 aa13.38□□□□□ -0.27
Trim17-201ENSMUST00000047697 Gm20521D3Z5F7 333 aa13.37□□□□□ -0.27
Trim17-201ENSMUST00000047697 Setbp1Q9Z180 1582 aa13.37□□□□□ -0.27
Trim17-201ENSMUST00000047697 AlkP97793 1621 aa13.37□□□□□ -0.27
Trim17-201ENSMUST00000047697 Kdm6bQ5NCY0 1641 aa13.37□□□□□ -0.27
Trim17-201ENSMUST00000047697 Arhgef12Q8R4H2 1543 aaKnown RBP13.36□□□□□ -0.27
Trim17-201ENSMUST00000047697 Dcaf11Q91VU6 549 aa13.36□□□□□ -0.27
Trim17-201ENSMUST00000047697 RalgapbQ8BQZ4 1484 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 Ipo8Q7TMY7 1010 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 SphkapQ6NSW3 1687 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 Adcy10Q8C0T9 1614 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 Mre11Q61216 706 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 Ppp2r1aQ76MZ3 589 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 Ak7Q9D2H2 614 aa13.35□□□□□ -0.27
Trim17-201ENSMUST00000047697 Polr3aB2RXC6 1390 aa13.34□□□□□ -0.27
Trim17-201ENSMUST00000047697 Gm6268A2A3U9 297 aa13.34□□□□□ -0.27
Trim17-201ENSMUST00000047697 Fam184bQ0KK56 942 aa13.34□□□□□ -0.27
Trim17-201ENSMUST00000047697 Asxl1P59598 1514 aa13.33□□□□□ -0.27
Trim17-201ENSMUST00000047697 Kif14L0N7N1 1674 aaKnown RBP13.33□□□□□ -0.27
Trim17-201ENSMUST00000047697 Golga2Q921M4 999 aa13.33□□□□□ -0.28
Trim17-201ENSMUST00000047697 Cd109Q8R422 1442 aa13.33□□□□□ -0.28
Trim17-201ENSMUST00000047697 Mapk8ip3Q9ESN9 1337 aa13.33□□□□□ -0.28
Trim17-201ENSMUST00000047697 Ccdc30Q8BVF4 654 aa13.33□□□□□ -0.28
Trim17-201ENSMUST00000047697 Stk24Q99KH8 431 aa13.33□□□□□ -0.28
Trim17-201ENSMUST00000047697 Rapgef6Q5NCJ1 1609 aa13.32□□□□□ -0.28
Trim17-201ENSMUST00000047697 Arid4bA2CG63 1314 aaKnown RBP13.32□□□□□ -0.28
Trim17-201ENSMUST00000047697 Fam163aQ8CAA5 168 aa13.32□□□□□ -0.28
Trim17-201ENSMUST00000047697 Disp1Q3TDN0 1521 aa13.31□□□□□ -0.28
Trim17-201ENSMUST00000047697 Plekhh1Q80TI1 1356 aa13.31□□□□□ -0.28
Trim17-201ENSMUST00000047697 Magi1Q6RHR9 1471 aa13.31□□□□□ -0.28
Trim17-201ENSMUST00000047697 Srpk2O54781 681 aaKnown RBP13.31□□□□□ -0.28
Trim17-201ENSMUST00000047697 AknaQ80VW7 1404 aa13.3□□□□□ -0.28
Trim17-201ENSMUST00000047697 Kif7B7ZNG0 1348 aa13.3□□□□□ -0.28
Trim17-201ENSMUST00000047697 Htatsf1Q8BGC0 757 aa13.3□□□□□ -0.28
Trim17-201ENSMUST00000047697 Nkx1-2P42580 305 aa13.3□□□□□ -0.28
Trim17-201ENSMUST00000047697 Pank1Q8K4K6 548 aa13.3□□□□□ -0.28
Trim17-201ENSMUST00000047697 Zmym4A2A791 1549 aaKnown RBP13.29□□□□□ -0.28
Trim17-201ENSMUST00000047697 Mbd5B1AYB6 1498 aa13.28□□□□□ -0.28
Trim17-201ENSMUST00000047697 Tspyl2Q7TQI8 677 aa13.28□□□□□ -0.28
Trim17-201ENSMUST00000047697 Gtf2e1Q9D0D5 440 aa13.27□□□□□ -0.28
Trim17-201ENSMUST00000047697 Mrc2Q64449 1479 aa13.27□□□□□ -0.28
Trim17-201ENSMUST00000047697 Map3k4O08648 1597 aa13.27□□□□□ -0.28
Trim17-201ENSMUST00000047697 Spag9Q58A65 1321 aaKnown RBP13.27□□□□□ -0.29
Trim17-201ENSMUST00000047697 Jph4Q80WT0 628 aa13.27□□□□□ -0.29
Trim17-201ENSMUST00000047697 Kif21aQ9QXL2 1672 aa13.27□□□□□ -0.29
Trim17-201ENSMUST00000047697 Ccdc141E9Q8Q6 1531 aa13.27□□□□□ -0.29
Trim17-201ENSMUST00000047697 Rab3gap2Q8BMG7 1366 aa13.27□□□□□ -0.29
Trim17-201ENSMUST00000047697 Cluap1Q8R3P7 413 aa13.27□□□□□ -0.29
Trim17-201ENSMUST00000047697 Cpsf1Q9EPU4 1441 aaKnown RBP13.26□□□□□ -0.29
Trim17-201ENSMUST00000047697 Ecm2Q5FW85 670 aa13.26□□□□□ -0.29
Trim17-201ENSMUST00000047697 Fan1Q69ZT1 1020 aa13.26□□□□□ -0.29
Trim17-201ENSMUST00000047697 Supt6hQ62383 1726 aaKnown RBP13.26□□□□□ -0.29
Trim17-201ENSMUST00000047697 Ccdc183A2AJB1 534 aa13.25□□□□□ -0.29
Trim17-201ENSMUST00000047697 Adamts12Q811B3 1600 aa13.25□□□□□ -0.29
Trim17-201ENSMUST00000047697 Prex2Q3LAC4 1598 aa13.25□□□□□ -0.29
Trim17-201ENSMUST00000047697 Pde4cQ3UEI1 686 aa13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 Smc5Q8CG46 1101 aaKnown RBP13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 Lamc1P02468 1607 aaKnown RBP13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 KarsQ99MN1 595 aaKnown RBP13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 DroshaQ5HZJ0 1373 aaKnown RBP13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 Mink1Q9JM52 1308 aa13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 Dnttip2Q8R2M2 758 aaKnown RBP13.24□□□□□ -0.29
Trim17-201ENSMUST00000047697 Shroom2A2ALU4 1481 aa13.23□□□□□ -0.29
Trim17-201ENSMUST00000047697 Fam135aQ6NS59 1506 aa13.22□□□□□ -0.29
Trim17-201ENSMUST00000047697 Atp7aQ64430 1491 aa13.22□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 18.5 ms