RNA–Protein interactions for RNA: ENST00000641828.1

CASC19-260, Transcript of cancer susceptibility 19, humanhuman

BASIC

Gene CASC19, Length 2,001 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-260ENST00000641828 GFRA2O00451 464 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 LIN7AO14910 233 aaPredicted RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 PPFIA3O75145 1194 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 RPSAP08865 295 aaKnown RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 CASP14P31944 242 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 RPS6KA3P51812 740 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 SSRP1Q08945 709 aaKnown RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 E2F5Q15329 346 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 PTGISQ16647 500 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 TKFCQ3LXA3 575 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 TTMPQ5BVD1 217 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 SPECC1Q5M775 1068 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 WIPI1Q5MNZ9 446 aaPredicted RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 CAPRIN2Q6IMN6 1127 aaKnown RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 MRM1Q6IN84 353 aaKnown RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 PPP4R3AQ6IN85 833 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 PSAPL1Q6NUJ1 521 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.49□□□□□ -1.37
CASC19-260ENST00000641828 ARMC9Q7Z3E5 817 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 CACTIN-AS1Q8N1I8 211 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 VWA5B2Q8N398 1253 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 MMGT1Q8N4V1 131 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 OR8K1Q8NGG5 319 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 MYCBPAPQ8TBZ2 947 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 CCHCR1Q8TD31 782 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 SPAG5Q96R06 1193 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 PSMD1Q99460 953 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 KLHL42Q9P2K6 505 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 ZMYM5Q9UJ78 669 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 PTCH2Q9Y6C5 1203 aa6.49□□□□□ -1.37
CASC19-260ENST00000641828 ZMYM6O95789 1325 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 ANO9A1A5B4 782 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 ERICH2A1L162 156 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 FRMD3A2A2Y4 597 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 EME2A4GXA9 379 aaPredicted RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 TEX33O43247 280 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 HSPA8P11142 646 aaKnown RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 ADH6P28332 368 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 TNFRSF8P28908 595 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 MDH1P40925 334 aaKnown RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 SARSP49591 514 aaKnown RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 TRIM14Q14142 442 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 KCNB1Q14721 858 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 LONRF3Q496Y0 759 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 LACTB2Q53H82 288 aaPredicted RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 HSP90AA4PQ58FG1 418 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 BEND3Q5T5X7 828 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 HGSNATQ68CP4 663 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 SHC4Q6S5L8 630 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 CD302Q8IX05 232 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 RPUSD2Q8IZ73 545 aaKnown RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 TAB3Q8N5C8 712 aaPredicted RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 DRAXINQ8NBI3 349 aaPredicted RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 ACRBPQ8NEB7 543 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 RASSF8Q8NHQ8 419 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 SLC7A3Q8WY07 619 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 TTC9Q92623 222 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 CAVIN3Q969G5 261 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 ARL8AQ96BM9 186 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 PLPPR2Q96GM1 343 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 TRIM47Q96LD4 638 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 LRRC2Q9BYS8 371 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 BOLA2Q9H3K6 86 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 SAMSN1Q9NSI8 373 aaKnown RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 IRAK4Q9NWZ3 460 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 ADD3Q9UEY8 706 aaKnown RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 KCNH3Q9ULD8 1083 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 CORO1CQ9ULV4 474 aaPredicted RBP6.48□□□□□ -1.37
CASC19-260ENST00000641828 CORINQ9Y5Q5 1042 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 SLC12A7Q9Y666 1083 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 MROH7-TTC4A0A0A0MT08 1334 aa6.48□□□□□ -1.37
CASC19-260ENST00000641828 UPK3BL1B0FP48 263 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 UPK3BL2E5RIL1 263 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 AHCYL1O43865 530 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 SKAP2O75563 359 aaPredicted RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 DNAJC8O75937 253 aaPredicted RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 FESP07332 822 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 ARAFP10398 606 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 MARCKSP29966 332 aaPredicted RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 PLCD1P51178 756 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 AMPD3Q01432 767 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 G3BP1Q13283 466 aaKnown RBP eCLIP6.47□□□□□ -1.37
CASC19-260ENST00000641828 RIPK1Q13546 671 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 MORC3Q14149 939 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 INPP5AQ14642 412 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 MCMDC2Q4G0Z9 681 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 GLE1Q53GS7 698 aaKnown RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 ANKRD20A8PQ5CZ79 823 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 MIS18BP1Q6P0N0 1132 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 SV2AQ7L0J3 742 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 BZW1Q7L1Q6 419 aaKnown RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 APTXQ7Z2E3 356 aaKnown RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 ARFGAP2Q8N6H7 521 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 CUL5Q93034 780 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 JAKMIP2Q96AA8 810 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 ZNF669Q96BR6 464 aaPredicted RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 EAF2Q96CJ1 260 aaPredicted RBP6.47□□□□□ -1.37
CASC19-260ENST00000641828 OSBPL9Q96SU4 736 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 MDFIQ99750 246 aa6.47□□□□□ -1.37
CASC19-260ENST00000641828 CORO1BQ9BR76 489 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms